BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003692
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF30480.1| cytochrome c oxidase subunit Vb [Pisum sativum]       167   3e-39
dbj|BAF30483.1| cytochrome c oxidase subunit Vb [Pisum sativum]       167   3e-39
gb|AFK44279.1| unknown [Lotus japonicus]                              167   4e-39
ref|XP_002517575.1| cytochrome C oxidase, putative [Ricinus comm...   167   4e-39
dbj|BAJ53249.1| JHL25H03.12 [Jatropha curcas]                         166   7e-39

>dbj|BAF30480.1| cytochrome c oxidase subunit Vb [Pisum sativum]
          Length = 155

 Score =  167 bits (423), Expect = 3e-39
 Identities = 85/144 (59%), Positives = 105/144 (72%)
 Frame = -2

Query: 841 RRLSTKLRNLPASSSLLKPNNNSIRINNLQXXXXXXXXXXXSAPLFSVGKKMVEDFMPIA 662
           R +S++L+ L +SSS L+  + ++ ++ L                 +V KK VED +PIA
Sbjct: 4   RLISSQLKTLTSSSSPLRSPSPAVAVSLLSCHFSTQSDDS------TVVKKKVEDIVPIA 57

Query: 661 TGHEKEELEAQILGRDLLEINQPVGPFGTKEAPAIVKSYYDKRIVGCPGGGESEDEHDVV 482
           TGHE+EEL+AQI GRD+LEI+ P GPFGTKEAPA+VKSYYDKRIVGCP GGE EDEHDVV
Sbjct: 58  TGHEREELQAQIEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCP-GGEGEDEHDVV 116

Query: 481 WFWLDKGHVHVCPVCSQYFKLEVV 410
           WFWL+K   H CPVC+QYF LEVV
Sbjct: 117 WFWLEKDKPHECPVCAQYFVLEVV 140


>dbj|BAF30483.1| cytochrome c oxidase subunit Vb [Pisum sativum]
          Length = 155

 Score =  167 bits (423), Expect = 3e-39
 Identities = 85/144 (59%), Positives = 105/144 (72%)
 Frame = -2

Query: 841 RRLSTKLRNLPASSSLLKPNNNSIRINNLQXXXXXXXXXXXSAPLFSVGKKMVEDFMPIA 662
           R +S++L+ L +SSS L+  + ++ ++ L                 +V KK VED +PIA
Sbjct: 4   RLISSQLKTLTSSSSPLRSPSPAVAVSLLSCLFSTQSDDS------TVVKKKVEDIVPIA 57

Query: 661 TGHEKEELEAQILGRDLLEINQPVGPFGTKEAPAIVKSYYDKRIVGCPGGGESEDEHDVV 482
           TGHE+EEL+AQI GRD+LEI+ P GPFGTKEAPA+VKSYYDKRIVGCP GGE EDEHDVV
Sbjct: 58  TGHEREELQAQIEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCP-GGEGEDEHDVV 116

Query: 481 WFWLDKGHVHVCPVCSQYFKLEVV 410
           WFWL+K   H CPVC+QYF LEVV
Sbjct: 117 WFWLEKDKPHECPVCAQYFVLEVV 140


>gb|AFK44279.1| unknown [Lotus japonicus]
          Length = 153

 Score =  167 bits (422), Expect = 4e-39
 Identities = 77/95 (81%), Positives = 84/95 (88%)
 Frame = -2

Query: 694 KKMVEDFMPIATGHEKEELEAQILGRDLLEINQPVGPFGTKEAPAIVKSYYDKRIVGCPG 515
           KK VED MPIATGHE+EEL+A + GRD+LEIN PVGPFGTKEAPA+VKSYYDKRIVGCP 
Sbjct: 45  KKKVEDVMPIATGHEREELQANLEGRDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCP- 103

Query: 514 GGESEDEHDVVWFWLDKGHVHVCPVCSQYFKLEVV 410
           GGE EDEHDVVWFWL+KG  H CPVC+QYF LEVV
Sbjct: 104 GGEGEDEHDVVWFWLEKGKPHECPVCAQYFVLEVV 138


>ref|XP_002517575.1| cytochrome C oxidase, putative [Ricinus communis]
           gi|223543207|gb|EEF44739.1| cytochrome C oxidase,
           putative [Ricinus communis]
          Length = 171

 Score =  167 bits (422), Expect = 4e-39
 Identities = 90/157 (57%), Positives = 104/157 (66%), Gaps = 11/157 (7%)
 Frame = -2

Query: 847 MWRR-LSTKLRNLPASSS----------LLKPNNNSIRINNLQXXXXXXXXXXXSAPLFS 701
           MWRR LS+ L+ L ASSS             P + S    +             +A    
Sbjct: 1   MWRRSLSSHLKTLAASSSSRTTSAAASRFASPKHRSFLSPSPSASIFQRYFTAEAAD--G 58

Query: 700 VGKKMVEDFMPIATGHEKEELEAQILGRDLLEINQPVGPFGTKEAPAIVKSYYDKRIVGC 521
             K+ VED MPIATGHE+EELEA++ GRD+LEIN PVGPFGTKEAPA+VKSYYDKR+VGC
Sbjct: 59  AVKRRVEDAMPIATGHEREELEAELQGRDILEINHPVGPFGTKEAPAVVKSYYDKRLVGC 118

Query: 520 PGGGESEDEHDVVWFWLDKGHVHVCPVCSQYFKLEVV 410
           P GGE EDEHDV+WFWL KG  H CPVC+QYF LEVV
Sbjct: 119 P-GGEGEDEHDVIWFWLKKGKPHECPVCTQYFVLEVV 154


>dbj|BAJ53249.1| JHL25H03.12 [Jatropha curcas]
          Length = 165

 Score =  166 bits (420), Expect = 7e-39
 Identities = 91/152 (59%), Positives = 108/152 (71%), Gaps = 6/152 (3%)
 Frame = -2

Query: 847 MWRR-LSTKLRNLP-----ASSSLLKPNNNSIRINNLQXXXXXXXXXXXSAPLFSVGKKM 686
           MWRR +S++L+ L      A+++     N SI I+               A   SVGK+ 
Sbjct: 1   MWRRAVSSQLKTLASCRSAAAAARFASPNRSI-ISPSPSASLFHRYFNADAASGSVGKR- 58

Query: 685 VEDFMPIATGHEKEELEAQILGRDLLEINQPVGPFGTKEAPAIVKSYYDKRIVGCPGGGE 506
           VED MPIATG E+EELEA++ G+D+LEIN PVGPFGTKEAPA+VKSYYDKRIVGCP GGE
Sbjct: 59  VEDIMPIATGSEREELEAELQGKDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCP-GGE 117

Query: 505 SEDEHDVVWFWLDKGHVHVCPVCSQYFKLEVV 410
            EDEHDVVWFWL+KG  H CPVC+QYF LEVV
Sbjct: 118 GEDEHDVVWFWLEKGKPHECPVCTQYFVLEVV 149