BLASTX nr result

ID: Coptis24_contig00003691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003691
         (1626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277472.1| PREDICTED: F-box/kelch-repeat protein At1g30...   502   e-139
ref|XP_002309296.1| predicted protein [Populus trichocarpa] gi|2...   492   e-136
ref|XP_003593908.1| F-box/kelch-repeat protein [Medicago truncat...   491   e-136
ref|XP_003546081.1| PREDICTED: F-box/kelch-repeat protein At1g30...   489   e-136
ref|XP_004149669.1| PREDICTED: F-box/kelch-repeat protein At1g30...   489   e-135

>ref|XP_002277472.1| PREDICTED: F-box/kelch-repeat protein At1g30090 [Vitis vinifera]
            gi|147822560|emb|CAN75078.1| hypothetical protein
            VITISV_005005 [Vitis vinifera]
          Length = 405

 Score =  502 bits (1293), Expect = e-139
 Identities = 229/323 (70%), Positives = 268/323 (82%)
 Frame = +2

Query: 494  VCKRWHLLLGTKERFFSRRKELGYQDPWLFICTYQKCTSKIQWQVLDLTNLSWHTIPLMP 673
            VCKRWHLLLG KERFF+RRKELG+QDPWLF+  + KCT KIQWQVLDL + SWHTIP MP
Sbjct: 79   VCKRWHLLLGNKERFFTRRKELGFQDPWLFVFAFHKCTGKIQWQVLDLNHFSWHTIPAMP 138

Query: 674  CKERICPHGFRCISTPQEGTLFVFGGMASDLDTPLNLVLKYEIHKNRWSVMNKMTTARSF 853
            CK+++CPHGFRC+S P EG LFV GGM SD+D PL+LVLKYE+ KNRW+VM++M TARSF
Sbjct: 139  CKDKVCPHGFRCVSIPHEGALFVCGGMVSDVDCPLDLVLKYEMQKNRWTVMSQMITARSF 198

Query: 854  FACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIASMGVNMASYDAAVHNGKLLV 1033
            FA G+IDGM+Y AGGNSSDLFEL+ A+VLDP+KG W PIASMG NMASYDAAV NGKLLV
Sbjct: 199  FATGVIDGMIYAAGGNSSDLFELDLAEVLDPVKGIWSPIASMGTNMASYDAAVLNGKLLV 258

Query: 1034 TEGWLWPFLFSPRGQVYDPRLNCWETMSANLREGWTGLSAVVDGHLFVVSEHERMKLKVY 1213
            TEGWLWPF  SPRGQVYDPR N WE M+A LREGWTG S VV GHLFVVSEHERMKLKVY
Sbjct: 259  TEGWLWPFFVSPRGQVYDPRTNNWENMAAGLREGWTGSSVVVYGHLFVVSEHERMKLKVY 318

Query: 1214 DVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLHVAIGHMRKLHLKCTSGKDWC 1393
            D+++D+WE V G  +PEQI KPFSVN+ D +I+VVG NLHVA+GH+ +L+ K    K+W 
Sbjct: 319  DMESDNWETVEGPALPEQICKPFSVNACDCKIYVVGRNLHVAVGHIWRLNQKGNCEKNWS 378

Query: 1394 FFVEWKIVNAPKTLCGWSPASSQ 1462
            F V W +V+AP+     +P+SSQ
Sbjct: 379  FGVRWHVVDAPEAFADLTPSSSQ 401


>ref|XP_002309296.1| predicted protein [Populus trichocarpa] gi|222855272|gb|EEE92819.1|
            predicted protein [Populus trichocarpa]
          Length = 405

 Score =  492 bits (1266), Expect = e-136
 Identities = 222/323 (68%), Positives = 267/323 (82%)
 Frame = +2

Query: 494  VCKRWHLLLGTKERFFSRRKELGYQDPWLFICTYQKCTSKIQWQVLDLTNLSWHTIPLMP 673
            VCKRWHLLLG KERFF+RRKELG++DPWLF+ ++ KCT KIQWQVLDL N SWHTIP MP
Sbjct: 79   VCKRWHLLLGNKERFFTRRKELGFKDPWLFVFSFHKCTGKIQWQVLDLINFSWHTIPAMP 138

Query: 674  CKERICPHGFRCISTPQEGTLFVFGGMASDLDTPLNLVLKYEIHKNRWSVMNKMTTARSF 853
            CK ++CPHGFRC+S   +GTLFV GGM SD+D PL+LVLKYE+ KNRW+VMN+M TARSF
Sbjct: 139  CKHKVCPHGFRCVSVAHDGTLFVCGGMVSDVDFPLDLVLKYEMQKNRWTVMNRMITARSF 198

Query: 854  FACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIASMGVNMASYDAAVHNGKLLV 1033
            FA G+I+GM+YVAGGNSSDLFEL+SA+VLDP+KG+W+ IA+MG NMASYDAAV +GKLLV
Sbjct: 199  FASGVIEGMIYVAGGNSSDLFELDSAEVLDPVKGNWRRIANMGTNMASYDAAVLDGKLLV 258

Query: 1034 TEGWLWPFLFSPRGQVYDPRLNCWETMSANLREGWTGLSAVVDGHLFVVSEHERMKLKVY 1213
            TEGWLWPF FSPRGQ+YDPR + WE M+  LREGWTG S VV G LFVVS+ ERMKLKVY
Sbjct: 259  TEGWLWPFFFSPRGQIYDPRTDKWENMAFGLREGWTGSSVVVYGRLFVVSDLERMKLKVY 318

Query: 1214 DVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLHVAIGHMRKLHLKCTSGKDWC 1393
            D ++DSWE + GSP+PEQI KPF+VN+ D +I+VVG NLHV +GH+ +L  K    K W 
Sbjct: 319  DAESDSWETIEGSPLPEQISKPFAVNAWDCKIYVVGRNLHVVVGHISRLQQKGICEKKWG 378

Query: 1394 FFVEWKIVNAPKTLCGWSPASSQ 1462
            F V W +V+ P + C  +P+SSQ
Sbjct: 379  FSVRWHVVDPPDSFCDLTPSSSQ 401


>ref|XP_003593908.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355482956|gb|AES64159.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 405

 Score =  491 bits (1264), Expect = e-136
 Identities = 223/323 (69%), Positives = 270/323 (83%)
 Frame = +2

Query: 494  VCKRWHLLLGTKERFFSRRKELGYQDPWLFICTYQKCTSKIQWQVLDLTNLSWHTIPLMP 673
            VCKRWH+LLG KERFF+ RK++G++DPWLF+  Y KCT KIQWQVLDLT+ SWHTIP MP
Sbjct: 79   VCKRWHMLLGNKERFFTNRKQMGFKDPWLFVFAYHKCTGKIQWQVLDLTHFSWHTIPAMP 138

Query: 674  CKERICPHGFRCISTPQEGTLFVFGGMASDLDTPLNLVLKYEIHKNRWSVMNKMTTARSF 853
            CK+++CPHGFRC+S P +GTL+V GGM SD+D PL+LVLKYEI KNRW+VMN+M +ARSF
Sbjct: 139  CKDKVCPHGFRCVSMPHDGTLYVCGGMVSDVDCPLDLVLKYEITKNRWTVMNRMISARSF 198

Query: 854  FACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIASMGVNMASYDAAVHNGKLLV 1033
            FA G+IDGMVY AGGNS+DL+EL+SA+VLDPI G+W+ IA+MG NMASYDAAV NGKLLV
Sbjct: 199  FASGVIDGMVYAAGGNSTDLYELDSAEVLDPISGNWRAIANMGTNMASYDAAVLNGKLLV 258

Query: 1034 TEGWLWPFLFSPRGQVYDPRLNCWETMSANLREGWTGLSAVVDGHLFVVSEHERMKLKVY 1213
            TEGWLWPF  SPRGQVYDPR N WETM+  LREGWTG S VV GHLFVVSE ERMKLKVY
Sbjct: 259  TEGWLWPFYVSPRGQVYDPRTNSWETMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVY 318

Query: 1214 DVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLHVAIGHMRKLHLKCTSGKDWC 1393
            + + DSWE + GSP+PEQI KPF+VN+ D +I+VVG NL VA+GH+ KL+ K +  + W 
Sbjct: 319  NQEADSWEAIDGSPLPEQICKPFAVNACDCQIYVVGRNLLVAVGHISKLNPKESCKEKWN 378

Query: 1394 FFVEWKIVNAPKTLCGWSPASSQ 1462
            F V+W ++ APK+L   +P+SSQ
Sbjct: 379  FGVQWHVIEAPKSLSNLTPSSSQ 401


>ref|XP_003546081.1| PREDICTED: F-box/kelch-repeat protein At1g30090-like [Glycine max]
          Length = 405

 Score =  489 bits (1259), Expect = e-136
 Identities = 221/323 (68%), Positives = 268/323 (82%)
 Frame = +2

Query: 494  VCKRWHLLLGTKERFFSRRKELGYQDPWLFICTYQKCTSKIQWQVLDLTNLSWHTIPLMP 673
            VCKRWH+LLG KERFF+ RK+ G +DPWLF+  Y KCT KI+WQVLDLT+ SWHTIP MP
Sbjct: 79   VCKRWHMLLGNKERFFTNRKQFGLKDPWLFVFAYHKCTGKIKWQVLDLTHFSWHTIPAMP 138

Query: 674  CKERICPHGFRCISTPQEGTLFVFGGMASDLDTPLNLVLKYEIHKNRWSVMNKMTTARSF 853
            CK+++CPHGFRC+S P +GTLFV GGM SD+D PL+LVLKYE+ KNRW+VMN+M TARSF
Sbjct: 139  CKDKVCPHGFRCVSIPCDGTLFVCGGMVSDVDCPLDLVLKYEMQKNRWTVMNRMITARSF 198

Query: 854  FACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIASMGVNMASYDAAVHNGKLLV 1033
            FA G+IDGM+YVAGGNS+DL+EL+SA+VLDP+ GSW+PIA+MG NMASYDAAV NGKLLV
Sbjct: 199  FASGVIDGMIYVAGGNSTDLYELDSAEVLDPLNGSWRPIANMGTNMASYDAAVLNGKLLV 258

Query: 1034 TEGWLWPFLFSPRGQVYDPRLNCWETMSANLREGWTGLSAVVDGHLFVVSEHERMKLKVY 1213
            TEGWLWPF  SPRGQVYDPR N WE M+  LREGWTG S VV GHLFVVSE ERMKLKVY
Sbjct: 259  TEGWLWPFYVSPRGQVYDPRTNNWENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVY 318

Query: 1214 DVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLHVAIGHMRKLHLKCTSGKDWC 1393
            D +TDSWE + G P+PEQIRKPF+VN+ D  I+VVG NL V +GH+ +L+ K +  + W 
Sbjct: 319  DPETDSWEAIEGLPLPEQIRKPFAVNACDCHIYVVGQNLVVGVGHITRLNPKESCKEKWN 378

Query: 1394 FFVEWKIVNAPKTLCGWSPASSQ 1462
            F V W +++AP+++   +P+SSQ
Sbjct: 379  FSVRWHVIDAPESVSDLTPSSSQ 401


>ref|XP_004149669.1| PREDICTED: F-box/kelch-repeat protein At1g30090-like [Cucumis
            sativus]
          Length = 405

 Score =  489 bits (1258), Expect = e-135
 Identities = 224/323 (69%), Positives = 266/323 (82%)
 Frame = +2

Query: 494  VCKRWHLLLGTKERFFSRRKELGYQDPWLFICTYQKCTSKIQWQVLDLTNLSWHTIPLMP 673
            VCKRWH LLG+KERFF+RRKELG+++PWLF+  + KCT KIQWQVLDLT+ SWH+IPLMP
Sbjct: 79   VCKRWHQLLGSKERFFTRRKELGFKEPWLFVFAFHKCTGKIQWQVLDLTHFSWHSIPLMP 138

Query: 674  CKERICPHGFRCISTPQEGTLFVFGGMASDLDTPLNLVLKYEIHKNRWSVMNKMTTARSF 853
            CK+++CPHGFRC+S P EGTLFV GGM SD+D PL+LVLKYE+ KNRW+VMN+M TARSF
Sbjct: 139  CKDKVCPHGFRCVSIPHEGTLFVCGGMVSDVDCPLDLVLKYEMQKNRWTVMNQMITARSF 198

Query: 854  FACGIIDGMVYVAGGNSSDLFELESADVLDPIKGSWQPIASMGVNMASYDAAVHNGKLLV 1033
            FA G+IDG +YVAGGNS+DLFEL+SA+VLDPI+G+W  +ASMG NMASYDAAV NGKLLV
Sbjct: 199  FASGVIDGKIYVAGGNSTDLFELDSAEVLDPIQGNWNSVASMGTNMASYDAAVLNGKLLV 258

Query: 1034 TEGWLWPFLFSPRGQVYDPRLNCWETMSANLREGWTGLSAVVDGHLFVVSEHERMKLKVY 1213
            TEGWLWPF  +PRGQVYDP  N WETM+  LREGWTG S VV GHLFVVSE ERMKLKVY
Sbjct: 259  TEGWLWPFYVAPRGQVYDPTTNNWETMAIGLREGWTGSSVVVYGHLFVVSELERMKLKVY 318

Query: 1214 DVKTDSWEVVAGSPVPEQIRKPFSVNSTDSRIFVVGCNLHVAIGHMRKLHLKCTSGKDWC 1393
            D  +DSWE + G P+PEQI KPF+VN+ DS I+VVG NLHVA+G + +L  K T    W 
Sbjct: 319  DAASDSWEAIEGPPLPEQICKPFAVNACDSTIYVVGRNLHVAVGRISQLIKKGTCENKWS 378

Query: 1394 FFVEWKIVNAPKTLCGWSPASSQ 1462
            F V W +V+AP+     +P+SSQ
Sbjct: 379  FNVSWHVVDAPECFSDLTPSSSQ 401


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