BLASTX nr result

ID: Coptis24_contig00003677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003677
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298402.1| predicted protein [Populus trichocarpa] gi|2...   143   6e-32
ref|XP_002285429.1| PREDICTED: uncharacterized protein LOC100246...   142   1e-31
ref|XP_002314074.1| predicted protein [Populus trichocarpa] gi|2...   132   1e-28
ref|XP_002279163.1| PREDICTED: uncharacterized protein LOC100251...   125   2e-26
ref|XP_004139034.1| PREDICTED: uncharacterized protein LOC101213...   113   6e-23

>ref|XP_002298402.1| predicted protein [Populus trichocarpa] gi|222845660|gb|EEE83207.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  143 bits (361), Expect = 6e-32
 Identities = 70/113 (61%), Positives = 90/113 (79%)
 Frame = +1

Query: 634 MVGAISLIGSSVLDSHTCPCLCLDALSSSTMSFKSSGDIGFNRNSFGKKQLKRTEQLELS 813
           MVGA+S++GSSV+D HT PCLCLD+L ++ +  K+SGD+   R+S  +KQL R   LEL 
Sbjct: 1   MVGALSVMGSSVVDPHTSPCLCLDSLPTTNIGLKNSGDLALQRSSIKRKQLTRPGSLELG 60

Query: 814 SSFVDCWHEWRLSAKVLSGIVNGYSKKRQRKVRSLVIVNELAGQYEDNFDDVK 972
           SSFVD WH+WRLS+K +SGIV+  S+K QRK R LVIV+ELAGQYED+F+DVK
Sbjct: 61  SSFVDSWHDWRLSSKAISGIVSKSSRK-QRKDRGLVIVSELAGQYEDSFEDVK 112


>ref|XP_002285429.1| PREDICTED: uncharacterized protein LOC100246804 [Vitis vinifera]
          Length = 226

 Score =  142 bits (359), Expect = 1e-31
 Identities = 71/114 (62%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
 Frame = +1

Query: 634 MVGAISLIGSSVLDSHTCPCLCLDALSSSTMSFKSSG-DIGFNRNSFGKKQLKRTEQLEL 810
           M GA+S++GSS+ D  TCPCLCLDAL SS MS K+ G D+ + RNS GKK+L R   +E+
Sbjct: 1   MSGALSVVGSSIFDPKTCPCLCLDALPSSNMSVKAGGGDLVWQRNSVGKKRLSRPGTVEM 60

Query: 811 SSSFVDCWHEWRLSAKVLSGIVNGYSKKRQRKVRSLVIVNELAGQYEDNFDDVK 972
            SSFVD WHEWRL AKVLS IVN  S +RQ K R L++V+E+AGQYED+F+DVK
Sbjct: 61  GSSFVDSWHEWRLEAKVLSSIVN-KSSRRQHKARRLLVVSEVAGQYEDSFEDVK 113


>ref|XP_002314074.1| predicted protein [Populus trichocarpa] gi|222850482|gb|EEE88029.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  132 bits (332), Expect = 1e-28
 Identities = 68/113 (60%), Positives = 84/113 (74%)
 Frame = +1

Query: 634 MVGAISLIGSSVLDSHTCPCLCLDALSSSTMSFKSSGDIGFNRNSFGKKQLKRTEQLELS 813
           MVGA+S     V+D HT PCLCLDAL ++ +  KSSGD+   R+S  +KQL R   LEL 
Sbjct: 1   MVGALS-----VVDPHTSPCLCLDALPTTNIGLKSSGDLVLQRSSMKRKQLTRPGSLELG 55

Query: 814 SSFVDCWHEWRLSAKVLSGIVNGYSKKRQRKVRSLVIVNELAGQYEDNFDDVK 972
           SSFVD WH+WRLS+K +SGIV+  S+K QRK R LV+VNEL GQYED+F+DVK
Sbjct: 56  SSFVDSWHDWRLSSKAISGIVSKSSRK-QRKDRGLVVVNELGGQYEDSFEDVK 107


>ref|XP_002279163.1| PREDICTED: uncharacterized protein LOC100251681 [Vitis vinifera]
          Length = 226

 Score =  125 bits (313), Expect = 2e-26
 Identities = 63/117 (53%), Positives = 83/117 (70%)
 Frame = +1

Query: 634 MVGAISLIGSSVLDSHTCPCLCLDALSSSTMSFKSSGDIGFNRNSFGKKQLKRTEQLELS 813
           MVGAI +  SS  + ++CP LCLD+LS S ++ KSSGD G  RN   KKQL R   L+LS
Sbjct: 1   MVGAILISSSSFPELYSCPYLCLDSLSLSNLNVKSSGDSGLYRNLIAKKQLWRPGSLDLS 60

Query: 814 SSFVDCWHEWRLSAKVLSGIVNGYSKKRQRKVRSLVIVNELAGQYEDNFDDVKRVVR 984
           SSF+D W+EWRLS K+LS I N  S+K+++    L IV+EL GQYED F+DVK+ ++
Sbjct: 61  SSFIDAWYEWRLSTKMLSHIANRCSRKQRKLGNHLSIVDELGGQYEDTFNDVKKQIQ 117


>ref|XP_004139034.1| PREDICTED: uncharacterized protein LOC101213099 [Cucumis sativus]
           gi|449476061|ref|XP_004154629.1| PREDICTED:
           uncharacterized LOC101213099 [Cucumis sativus]
          Length = 222

 Score =  113 bits (283), Expect = 6e-23
 Identities = 58/114 (50%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
 Frame = +1

Query: 634 MVGAISLIGSSVLDSHTCPCLCLDALSSSTMSFKSSGDIGFNRN-SFGKKQLKRTEQLEL 810
           MVGA+S++GSSV+DSH+ PCLCLDAL +++++ KS GD    +  S G+++L + + L+L
Sbjct: 1   MVGALSMVGSSVVDSHSSPCLCLDALPTTSINLKSCGDFVMKKKYSKGRQRLPKPKHLDL 60

Query: 811 SSSFVDCWHEWRLSAKVLSGIVNGYSKKRQRKVRSLVIVNELAGQYEDNFDDVK 972
           SSSFVD   EW LS  +++      S ++Q K R L++V+EL GQYEDNFDDVK
Sbjct: 61  SSSFVDNGREWLLSVDMIN-----RSSRKQTKNRRLMVVDELGGQYEDNFDDVK 109


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