BLASTX nr result

ID: Coptis24_contig00003675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003675
         (1356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633131.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase...   556   e-156
ref|XP_004139338.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase...   546   e-153
emb|CBI28107.3| unnamed protein product [Vitis vinifera]              541   e-151
gb|ABK96659.1| unknown [Populus trichocarpa x Populus deltoides]      541   e-151
ref|XP_002308317.1| predicted protein [Populus trichocarpa] gi|2...   540   e-151

>ref|XP_003633131.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3,
            mitochondrial-like isoform 2 [Vitis vinifera]
          Length = 425

 Score =  556 bits (1432), Expect = e-156
 Identities = 279/355 (78%), Positives = 311/355 (87%)
 Frame = -3

Query: 1087 DEFVKGSLLPNGVAVITLDRPKALNAMNLDMDIKYKRHLDEWETNPSVKCVLVESSSPRA 908
            +EFVKG++ PNGVAVITLDRPKALNAMNLDMDI+YK+ LDEWE +P VKCVLVE SS RA
Sbjct: 51   EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIRYKKFLDEWEMDPMVKCVLVEGSSSRA 110

Query: 907  FSAGMDIKGVVAEIQKDKNTPLVPKVFGAEYSLICKIFEYKKPYICFMDGITMGFGIGLS 728
            FSAGMDIKGVVAEIQKDK TPLV KVF AEYSLICKI EYKKPYI  MDGITMGFGIGLS
Sbjct: 111  FSAGMDIKGVVAEIQKDKTTPLVQKVFTAEYSLICKISEYKKPYISLMDGITMGFGIGLS 170

Query: 727  GHGRYRIITERTVLAMPENGIGLFPDVGFSYIAAQSPGKGSVGAYLGMTGKRISSPADAL 548
            GHGRYRI+TERT+LAMPENGIGLFPDVGF+YIAAQSPG+GSVGAYLGMTGKRIS+ ADAL
Sbjct: 171  GHGRYRIVTERTLLAMPENGIGLFPDVGFAYIAAQSPGEGSVGAYLGMTGKRISTSADAL 230

Query: 547  YIGLGSHYVPSGKLASLREALQSLTFSDDPHNDVETLLGDHSITPESESQLKLLLPQIVS 368
            Y+GLG+HYVPSG L+SL+EAL + +FS+DPH D+  LL  +S  PESE+QLKLLLPQIVS
Sbjct: 231  YVGLGTHYVPSGNLSSLKEALLTTSFSEDPHQDIRELLVKYSHDPESEAQLKLLLPQIVS 290

Query: 367  SFSPDKSVAEIIEELKKRQLSTDSTEAEWAKDAVSGLGKGAPFSLCLTHNLFSRVASARQ 188
            +FS DKSV EIIEELKK QLSTD+  +EWAK+A+ GLGKGAPFSLCLT   FSRVA AR 
Sbjct: 291  TFSADKSVNEIIEELKKHQLSTDAIVSEWAKEALLGLGKGAPFSLCLTQKHFSRVALARG 350

Query: 187  KSDDNLGKLSAVMKAEYRIAIRSSRRNDFAEGVRAVLIDKDQKPVWNPLRVEDTD 23
            K+D +L  LS VMK EYRIA+RSS RNDFAEGVRAVL+DKDQKP WNP  +E+ D
Sbjct: 351  KNDSDLCSLSGVMKTEYRIALRSSLRNDFAEGVRAVLVDKDQKPKWNPSSLEEVD 405


>ref|XP_004139338.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3,
            mitochondrial-like [Cucumis sativus]
            gi|449518115|ref|XP_004166089.1| PREDICTED:
            3-hydroxyisobutyryl-CoA hydrolase-like protein 3,
            mitochondrial-like [Cucumis sativus]
          Length = 424

 Score =  546 bits (1406), Expect = e-153
 Identities = 278/409 (67%), Positives = 325/409 (79%), Gaps = 2/409 (0%)
 Frame = -3

Query: 1222 ATHFILKNISTSLKNCLTIKSNHYLYCDK--KRTFSIMAGAXXXXXSDEFVKGSLLPNGV 1049
            A+ F+ K+ +  L   L   +  +++ +   +RT + MAG       D+FVKGS+ PNGV
Sbjct: 9    ASQFLFKSSTLPLSQTLPSLTLFHIHSNSVSRRTLAAMAGTD-----DQFVKGSVHPNGV 63

Query: 1048 AVITLDRPKALNAMNLDMDIKYKRHLDEWETNPSVKCVLVESSSPRAFSAGMDIKGVVAE 869
            AVITLDRPKALNAMNLDMDI+YK++LDEWE +P VKCVLVE SS RAF AGMDIKGVVAE
Sbjct: 64   AVITLDRPKALNAMNLDMDIQYKKYLDEWEEDPRVKCVLVEGSSSRAFCAGMDIKGVVAE 123

Query: 868  IQKDKNTPLVPKVFGAEYSLICKIFEYKKPYICFMDGITMGFGIGLSGHGRYRIITERTV 689
            IQKDKNT LV KVF AEYSLICKI  YKKPY+ FMDGITMGFGIGLSGHGRYRIITERT+
Sbjct: 124  IQKDKNTSLVQKVFTAEYSLICKISNYKKPYLSFMDGITMGFGIGLSGHGRYRIITERTL 183

Query: 688  LAMPENGIGLFPDVGFSYIAAQSPGKGSVGAYLGMTGKRISSPADALYIGLGSHYVPSGK 509
            LAMPENGIGLFPDVGFSYIAAQ PG+GSVGAYLG+TG+RISSP+DALY+GLG+HYVPSG 
Sbjct: 184  LAMPENGIGLFPDVGFSYIAAQGPGEGSVGAYLGLTGRRISSPSDALYVGLGTHYVPSGN 243

Query: 508  LASLREALQSLTFSDDPHNDVETLLGDHSITPESESQLKLLLPQIVSSFSPDKSVAEIIE 329
            L SL+E L + TFS+DPH D+ TLL  +S  PES   LKLLLPQI SSF  +KSV E +E
Sbjct: 244  LGSLKEGLLTATFSEDPHQDINTLLAKYSSDPESPPSLKLLLPQITSSFGTNKSVKETVE 303

Query: 328  ELKKRQLSTDSTEAEWAKDAVSGLGKGAPFSLCLTHNLFSRVASARQKSDDNLGKLSAVM 149
            ELKK QL + S+  EWAK+++ G+GKGAPFSL LT   FS+VA+A  KS+D L  L+ VM
Sbjct: 304  ELKKHQLDSSSSVVEWAKESLQGIGKGAPFSLALTQKYFSKVAAAHGKSNDELSTLNGVM 363

Query: 148  KAEYRIAIRSSRRNDFAEGVRAVLIDKDQKPVWNPLRVEDTDAETSVES 2
            + EYRIA+RSS RNDFAEGVRAVL+DKDQ P WNP  +ED D E  V+S
Sbjct: 364  RTEYRIALRSSLRNDFAEGVRAVLVDKDQNPKWNPSTLEDVD-EKEVDS 411


>emb|CBI28107.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  541 bits (1395), Expect = e-151
 Identities = 279/381 (73%), Positives = 311/381 (81%), Gaps = 26/381 (6%)
 Frame = -3

Query: 1087 DEFVKGSLLPNGVAVITLDRPKALNAMNLDMDIKYKRHLDEWETNPSVKCVLVESSSPRA 908
            +EFVKG++ PNGVAVITLDRPKALNAMNLDMDI+YK+ LDEWE +P VKCVLVE SS RA
Sbjct: 7    EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIRYKKFLDEWEMDPMVKCVLVEGSSSRA 66

Query: 907  FSAGMDIKGVVAEIQKDKNTPLVPK--------------------------VFGAEYSLI 806
            FSAGMDIKGVVAEIQKDK TPLV K                          VF AEYSLI
Sbjct: 67   FSAGMDIKGVVAEIQKDKTTPLVQKCHFHFYIPCGDVKQISARKQLSYVIEVFTAEYSLI 126

Query: 805  CKIFEYKKPYICFMDGITMGFGIGLSGHGRYRIITERTVLAMPENGIGLFPDVGFSYIAA 626
            CKI EYKKPYI  MDGITMGFGIGLSGHGRYRI+TERT+LAMPENGIGLFPDVGF+YIAA
Sbjct: 127  CKISEYKKPYISLMDGITMGFGIGLSGHGRYRIVTERTLLAMPENGIGLFPDVGFAYIAA 186

Query: 625  QSPGKGSVGAYLGMTGKRISSPADALYIGLGSHYVPSGKLASLREALQSLTFSDDPHNDV 446
            QSPG+GSVGAYLGMTGKRIS+ ADALY+GLG+HYVPSG L+SL+EAL + +FS+DPH D+
Sbjct: 187  QSPGEGSVGAYLGMTGKRISTSADALYVGLGTHYVPSGNLSSLKEALLTTSFSEDPHQDI 246

Query: 445  ETLLGDHSITPESESQLKLLLPQIVSSFSPDKSVAEIIEELKKRQLSTDSTEAEWAKDAV 266
              LL  +S  PESE+QLKLLLPQIVS+FS DKSV EIIEELKK QLSTD+  +EWAK+A+
Sbjct: 247  RELLVKYSHDPESEAQLKLLLPQIVSTFSADKSVNEIIEELKKHQLSTDAIVSEWAKEAL 306

Query: 265  SGLGKGAPFSLCLTHNLFSRVASARQKSDDNLGKLSAVMKAEYRIAIRSSRRNDFAEGVR 86
             GLGKGAPFSLCLT   FSRVA AR K+D +L  LS VMK EYRIA+RSS RNDFAEGVR
Sbjct: 307  LGLGKGAPFSLCLTQKHFSRVALARGKNDSDLCSLSGVMKTEYRIALRSSLRNDFAEGVR 366

Query: 85   AVLIDKDQKPVWNPLRVEDTD 23
            AVL+DKDQKP WNP  +E+ D
Sbjct: 367  AVLVDKDQKPKWNPSSLEEVD 387


>gb|ABK96659.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 382

 Score =  541 bits (1393), Expect = e-151
 Identities = 266/362 (73%), Positives = 305/362 (84%)
 Frame = -3

Query: 1087 DEFVKGSLLPNGVAVITLDRPKALNAMNLDMDIKYKRHLDEWETNPSVKCVLVESSSPRA 908
            DEFVKG++ PNGVAV+TLDRPKALNAMNLDMDIKYK  +DEWE++P VKCVLVE SSPRA
Sbjct: 9    DEFVKGNIHPNGVAVLTLDRPKALNAMNLDMDIKYKTFMDEWESDPRVKCVLVEGSSPRA 68

Query: 907  FSAGMDIKGVVAEIQKDKNTPLVPKVFGAEYSLICKIFEYKKPYICFMDGITMGFGIGLS 728
            F AGMDIKGVVAEIQKDKNTP+V KVF AEYSLICKI EYKKPY+  MDG+TMGFGIGLS
Sbjct: 69   FCAGMDIKGVVAEIQKDKNTPVVQKVFTAEYSLICKISEYKKPYVSLMDGVTMGFGIGLS 128

Query: 727  GHGRYRIITERTVLAMPENGIGLFPDVGFSYIAAQSPGKGSVGAYLGMTGKRISSPADAL 548
            GHGRYRI+TERTVLAMPENGIGLFPDVGFSYIAA+SPG+GSVG YL +TGKRIS+P+DAL
Sbjct: 129  GHGRYRIVTERTVLAMPENGIGLFPDVGFSYIAAKSPGEGSVGNYLALTGKRISTPSDAL 188

Query: 547  YIGLGSHYVPSGKLASLREALQSLTFSDDPHNDVETLLGDHSITPESESQLKLLLPQIVS 368
            ++GLGSHYVPSG L  L+EAL  +TFS+DPH D+ +LL ++   PESESQLK LLP+I+S
Sbjct: 189  FVGLGSHYVPSGNLVQLKEALLQITFSNDPHQDINSLLAEYGHDPESESQLKSLLPRIIS 248

Query: 367  SFSPDKSVAEIIEELKKRQLSTDSTEAEWAKDAVSGLGKGAPFSLCLTHNLFSRVASARQ 188
            +F P+KSV EIIE LK  Q+S D    EWA DA+ G+GKGAPFSLCLT   FSRVA A  
Sbjct: 249  TFGPNKSVEEIIEMLKSHQMSADPKVVEWANDALQGIGKGAPFSLCLTQKYFSRVAFAFG 308

Query: 187  KSDDNLGKLSAVMKAEYRIAIRSSRRNDFAEGVRAVLIDKDQKPVWNPLRVEDTDAETSV 8
            K  + L  LS VMK EYRIA+RSS RNDFAEGVRAVL+DKDQKP WNP  +E+ D ++ +
Sbjct: 309  KISNELSTLSGVMKTEYRIALRSSLRNDFAEGVRAVLVDKDQKPKWNPSSLEEVD-QSEI 367

Query: 7    ES 2
            ES
Sbjct: 368  ES 369


>ref|XP_002308317.1| predicted protein [Populus trichocarpa] gi|222854293|gb|EEE91840.1|
            predicted protein [Populus trichocarpa]
          Length = 380

 Score =  540 bits (1390), Expect = e-151
 Identities = 265/362 (73%), Positives = 305/362 (84%)
 Frame = -3

Query: 1087 DEFVKGSLLPNGVAVITLDRPKALNAMNLDMDIKYKRHLDEWETNPSVKCVLVESSSPRA 908
            DEFVKG++ PNGVAV+TLDRPKALNAMNLDMDIKYK  +DEWE++P V+CVLVE SSPRA
Sbjct: 7    DEFVKGNIHPNGVAVLTLDRPKALNAMNLDMDIKYKTFMDEWESDPRVRCVLVEGSSPRA 66

Query: 907  FSAGMDIKGVVAEIQKDKNTPLVPKVFGAEYSLICKIFEYKKPYICFMDGITMGFGIGLS 728
            F AGMDIKGVVAEI+KDKNTP+V KVF AEYSLICKI EYKKPY+  MDG+TMGFGIGLS
Sbjct: 67   FCAGMDIKGVVAEIRKDKNTPVVQKVFTAEYSLICKISEYKKPYVSLMDGVTMGFGIGLS 126

Query: 727  GHGRYRIITERTVLAMPENGIGLFPDVGFSYIAAQSPGKGSVGAYLGMTGKRISSPADAL 548
            GHGRYRI+TERTVLAMPENGIGLFPDVGFSYIAA+SPG+GSVG YL +TGKRIS+P+DAL
Sbjct: 127  GHGRYRIVTERTVLAMPENGIGLFPDVGFSYIAAKSPGEGSVGNYLALTGKRISTPSDAL 186

Query: 547  YIGLGSHYVPSGKLASLREALQSLTFSDDPHNDVETLLGDHSITPESESQLKLLLPQIVS 368
            ++GLGSHYVPSG L  L+EAL  +TFS+DPH D+  LL ++   PESESQLK LLP+I+S
Sbjct: 187  FVGLGSHYVPSGNLVQLKEALLQITFSNDPHQDINALLAEYGHDPESESQLKSLLPRIIS 246

Query: 367  SFSPDKSVAEIIEELKKRQLSTDSTEAEWAKDAVSGLGKGAPFSLCLTHNLFSRVASARQ 188
            +F P+KSV EIIE+LK  QLS D    EWA DA+ G+GKGAPFSLCLT   FSRVA A  
Sbjct: 247  TFGPNKSVEEIIEKLKSHQLSADRKVVEWANDALQGIGKGAPFSLCLTQKYFSRVAFAFG 306

Query: 187  KSDDNLGKLSAVMKAEYRIAIRSSRRNDFAEGVRAVLIDKDQKPVWNPLRVEDTDAETSV 8
            K  + L  LS VMK EYRIA+RSS RNDFAEGVRAVL+DKDQKP WNP  +E+ D ++ +
Sbjct: 307  KISNELSTLSGVMKTEYRIALRSSLRNDFAEGVRAVLVDKDQKPKWNPSSLEEVD-QSEI 365

Query: 7    ES 2
            ES
Sbjct: 366  ES 367


Top