BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003656
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635074.1| PREDICTED: uncharacterized protein LOC100855...   282   1e-73
emb|CBI40929.3| unnamed protein product [Vitis vinifera]              275   2e-71
ref|XP_002326480.1| light harvesting-like protein 3 [Populus tri...   274   3e-71
ref|XP_002524363.1| transcription factor, putative [Ricinus comm...   273   8e-71
ref|XP_002329601.1| light harvesting-like protein 3 [Populus tri...   271   3e-70

>ref|XP_003635074.1| PREDICTED: uncharacterized protein LOC100855146 [Vitis vinifera]
          Length = 251

 Score =  282 bits (722), Expect = 1e-73
 Identities = 145/231 (62%), Positives = 162/231 (70%), Gaps = 3/231 (1%)
 Frame = +2

Query: 131 SAKPHYLQRPYLSSLCKKKDLIFLSIKAT--GDGTMGSAXXXXXXXXXXXXXXXXXXXAS 304
           S KP++  +P L    KK  L+ LS KAT  G GT  SA                   + 
Sbjct: 18  SPKPNFTLKPSLFLRSKKHQLLLLSAKATENGAGTSTSATTVEPEKAEEKAPEAAVLDSQ 77

Query: 305 -NGVAAVPAVAALKEEEVKFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDN 481
            NG AA   V  +     KF D +W+GGTWDLKQF  DGKTNWDAVIDAEVRRRKWL+DN
Sbjct: 78  PNGAAAAGDVVLV----TKFEDLKWVGGTWDLKQFETDGKTNWDAVIDAEVRRRKWLEDN 133

Query: 482 PESSNNDEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQ 661
           PESS+ND+PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQ
Sbjct: 134 PESSSNDDPVVFDTSIIPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQ 193

Query: 662 MGNFFCKTXXXXXXXXXXXXRKNEDVENLKNLLQETTLYDKQWQATWKDET 814
           MGNFFCKT            RKNED+E LK L+ ETT YDKQWQA+W+DET
Sbjct: 194 MGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLVDETTFYDKQWQASWQDET 244


>emb|CBI40929.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  275 bits (702), Expect = 2e-71
 Identities = 139/228 (60%), Positives = 157/228 (68%)
 Frame = +2

Query: 131 SAKPHYLQRPYLSSLCKKKDLIFLSIKATGDGTMGSAXXXXXXXXXXXXXXXXXXXASNG 310
           S KP++  +P L    KK  L+ LS KAT +G   S                     ++ 
Sbjct: 16  SPKPNFTLKPSLFLRSKKHQLLLLSAKATENGAGTS---------------------TSA 54

Query: 311 VAAVPAVAALKEEEVKFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDNPES 490
               P  A  K  E    D +W+GGTWDLKQF  DGKTNWDAVIDAEVRRRKWL+DNPES
Sbjct: 55  TTVEPEKAEEKAPEA--ADLKWVGGTWDLKQFETDGKTNWDAVIDAEVRRRKWLEDNPES 112

Query: 491 SNNDEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGN 670
           S+ND+PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGN
Sbjct: 113 SSNDDPVVFDTSIIPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGN 172

Query: 671 FFCKTXXXXXXXXXXXXRKNEDVENLKNLLQETTLYDKQWQATWKDET 814
           FFCKT            RKNED+E LK L+ ETT YDKQWQA+W+DET
Sbjct: 173 FFCKTLLFVAVVGVLLIRKNEDLETLKKLVDETTFYDKQWQASWQDET 220


>ref|XP_002326480.1| light harvesting-like protein 3 [Populus trichocarpa]
           gi|118482026|gb|ABK92944.1| unknown [Populus
           trichocarpa] gi|222833802|gb|EEE72279.1| light
           harvesting-like protein 3 [Populus trichocarpa]
          Length = 257

 Score =  274 bits (700), Expect = 3e-71
 Identities = 141/238 (59%), Positives = 163/238 (68%), Gaps = 7/238 (2%)
 Frame = +2

Query: 125 NFSAKPHYLQRPYLSSLCKKKDLIFLSIKA-TGDGTMGSAXXXXXXXXXXXXXXXXXXXA 301
           +FS+K H + +P LS        +  + KA T DG  G +                    
Sbjct: 14  SFSSKHHIIFKPTLSLRPTSPPFLLSTSKASTDDGGAGVSASSATVEEPKLEQKAPDSSE 73

Query: 302 SNGVA------AVPAVAALKEEEVKFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRR 463
           S  VA      AV     ++ E  KF DPRWI GTWDLKQF KDGKT+WDAVIDAEVRRR
Sbjct: 74  SVPVAEKNSNGAVAPGGGVEVEVSKFEDPRWISGTWDLKQFEKDGKTDWDAVIDAEVRRR 133

Query: 464 KWLQDNPESSNNDEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTG 643
           KWL+ NPESS+ND+PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTG
Sbjct: 134 KWLEGNPESSSNDDPVVFDTSIIPWWAWMKRFHLPEAELLNGRAAMIGFFMAYLVDSLTG 193

Query: 644 VGLVDQMGNFFCKTXXXXXXXXXXXXRKNEDVENLKNLLQETTLYDKQWQATWKDETT 817
           VG+VDQMGNFFCKT            RKNED+E +K LL+ETT YD+QWQATW+DET+
Sbjct: 194 VGVVDQMGNFFCKTLLFVAVVGVLLIRKNEDLETIKTLLEETTFYDRQWQATWQDETS 251


>ref|XP_002524363.1| transcription factor, putative [Ricinus communis]
           gi|223536324|gb|EEF37974.1| transcription factor,
           putative [Ricinus communis]
          Length = 259

 Score =  273 bits (697), Expect = 8e-71
 Identities = 137/235 (58%), Positives = 161/235 (68%), Gaps = 5/235 (2%)
 Frame = +2

Query: 125 NFSAKPHYLQRPYLSSLCKKKDLIFLSIKATGDGTMGSAXXXXXXXXXXXXXXXXXXXAS 304
           + S+KPH L +P           +F + KA+ D   G +                   + 
Sbjct: 18  SLSSKPHLLTKPTSFLTPINPPFLFSAPKASTDNGAGISAAAAAVEEPKEAEPKAAEPSP 77

Query: 305 NGV-AAVPAVAALKEEEVK----FGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKW 469
             V +++ +  A+K+ EVK    F DPRWIGGTWDLKQF KDG T+WD+VIDAEVRRRKW
Sbjct: 78  AAVESSLGSNGAVKDAEVKLESKFVDPRWIGGTWDLKQFQKDGSTDWDSVIDAEVRRRKW 137

Query: 470 LQDNPESSNNDEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVG 649
           L+ NPESS ND+PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAM+GFFMAY VDSLTGVG
Sbjct: 138 LESNPESSTNDDPVVFDTSIIPWWAWMKRFHLPEAELLNGRAAMVGFFMAYFVDSLTGVG 197

Query: 650 LVDQMGNFFCKTXXXXXXXXXXXXRKNEDVENLKNLLQETTLYDKQWQATWKDET 814
           LVDQMGNFFCKT            RKNED+E LK L+ ETT YDKQWQATW+DET
Sbjct: 198 LVDQMGNFFCKTLLFIAVAGVLLIRKNEDIETLKKLVDETTFYDKQWQATWQDET 252


>ref|XP_002329601.1| light harvesting-like protein 3 [Populus trichocarpa]
           gi|222870310|gb|EEF07441.1| light harvesting-like
           protein 3 [Populus trichocarpa]
          Length = 258

 Score =  271 bits (692), Expect = 3e-70
 Identities = 132/174 (75%), Positives = 144/174 (82%), Gaps = 3/174 (1%)
 Frame = +2

Query: 299 ASNGVAAVPAVAALKEEEV---KFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKW 469
           +SNG     AVAA  EE+V   KFGDPRWI GTWDLKQF KDGKT+WDAVIDAE RRRKW
Sbjct: 82  SSNG-----AVAAGGEEKVEVSKFGDPRWISGTWDLKQFQKDGKTDWDAVIDAEARRRKW 136

Query: 470 LQDNPESSNNDEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVG 649
           LQ NPESS+N++PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVG
Sbjct: 137 LQCNPESSSNNDPVVFDTSIIPWWTWMKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVG 196

Query: 650 LVDQMGNFFCKTXXXXXXXXXXXXRKNEDVENLKNLLQETTLYDKQWQATWKDE 811
           LVDQM NFFCKT            RKNED+E +K LL+ETT YDKQWQATW+DE
Sbjct: 197 LVDQMSNFFCKTLLFVAVVGVLLIRKNEDLETIKKLLEETTFYDKQWQATWQDE 250