BLASTX nr result

ID: Coptis24_contig00003642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003642
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266704.1| PREDICTED: sugar transporter ERD6-like 6 [Vi...   137   8e-30
emb|CAN72983.1| hypothetical protein VITISV_009034 [Vitis vinifera]   137   8e-30
ref|XP_002521558.1| sugar transporter, putative [Ricinus communi...   136   1e-29
ref|XP_002301864.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-27
gb|EEE64808.1| hypothetical protein OsJ_19664 [Oryza sativa Japo...   123   1e-25

>ref|XP_002266704.1| PREDICTED: sugar transporter ERD6-like 6 [Vitis vinifera]
           gi|297735148|emb|CBI17510.3| unnamed protein product
           [Vitis vinifera] gi|310877886|gb|ADP37174.1| putative
           ERD6-like transporter [Vitis vinifera]
          Length = 486

 Score =  137 bits (344), Expect = 8e-30
 Identities = 77/117 (65%), Positives = 87/117 (74%), Gaps = 22/117 (18%)
 Frame = +1

Query: 1   LSGINGILFYSSNIFKAAGISSSNVATLGL*VIQVLATGVTTWLVDKAGHRLLLIVS*SG 180
           LSGING+LFYSSNIF+AAGISSS++AT+GL VIQV+ATGVTTWLVDKAG RLLLIVS SG
Sbjct: 295 LSGINGVLFYSSNIFEAAGISSSDIATVGLGVIQVIATGVTTWLVDKAGRRLLLIVSSSG 354

Query: 181 MTASLLLVAVAFYWK----------------------SFVVFFSLRIGAIPWVIMSE 285
           MT SLLLV+VAFY K                      + V+ FSL +GAIPWVIMSE
Sbjct: 355 MTLSLLLVSVAFYLKDVISEDSRFYSILGILSLVGLVALVITFSLGVGAIPWVIMSE 411


>emb|CAN72983.1| hypothetical protein VITISV_009034 [Vitis vinifera]
          Length = 486

 Score =  137 bits (344), Expect = 8e-30
 Identities = 77/117 (65%), Positives = 87/117 (74%), Gaps = 22/117 (18%)
 Frame = +1

Query: 1   LSGINGILFYSSNIFKAAGISSSNVATLGL*VIQVLATGVTTWLVDKAGHRLLLIVS*SG 180
           LSGING+LFYSSNIF+AAGISSS++AT+GL VIQV+ATGVTTWLVDKAG RLLLIVS SG
Sbjct: 295 LSGINGVLFYSSNIFEAAGISSSDIATVGLGVIQVIATGVTTWLVDKAGRRLLLIVSSSG 354

Query: 181 MTASLLLVAVAFYWK----------------------SFVVFFSLRIGAIPWVIMSE 285
           MT SLLLV+VAFY K                      + V+ FSL +GAIPWVIMSE
Sbjct: 355 MTLSLLLVSVAFYLKDVISEDSRFYSILGILSLVGLVALVITFSLGVGAIPWVIMSE 411


>ref|XP_002521558.1| sugar transporter, putative [Ricinus communis]
           gi|223539236|gb|EEF40829.1| sugar transporter, putative
           [Ricinus communis]
          Length = 486

 Score =  136 bits (342), Expect = 1e-29
 Identities = 75/117 (64%), Positives = 87/117 (74%), Gaps = 22/117 (18%)
 Frame = +1

Query: 1   LSGINGILFYSSNIFKAAGISSSNVATLGL*VIQVLATGVTTWLVDKAGHRLLLIVS*SG 180
           LSGINGILFYSSNIF++AG+SS N+AT+GL VIQVLATGVTTWLVDKAG RLLLIVS SG
Sbjct: 295 LSGINGILFYSSNIFESAGLSSGNLATVGLGVIQVLATGVTTWLVDKAGRRLLLIVSTSG 354

Query: 181 MTASLLLVAVAFYWK----------------------SFVVFFSLRIGAIPWVIMSE 285
           +T SLLLVAVAFY +                      + ++FFSL +GAIPW+IMSE
Sbjct: 355 ITVSLLLVAVAFYLEGNVSKDSHLYGIMGILSLVGLVAMIIFFSLGLGAIPWIIMSE 411


>ref|XP_002301864.1| predicted protein [Populus trichocarpa] gi|222843590|gb|EEE81137.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  129 bits (323), Expect = 2e-27
 Identities = 73/117 (62%), Positives = 82/117 (70%), Gaps = 22/117 (18%)
 Frame = +1

Query: 1   LSGINGILFYSSNIFKAAGISSSNVATLGL*VIQVLATGVTTWLVDKAGHRLLLIVS*SG 180
           LSGING+LFYSSNIF  AGI SSNVAT+G+  IQV+ATGVTTWLVD+ G RLLLIVS SG
Sbjct: 296 LSGINGVLFYSSNIFATAGIKSSNVATVGVGAIQVIATGVTTWLVDRTGRRLLLIVSTSG 355

Query: 181 MTASLLLVAVAFYWKSF----------------------VVFFSLRIGAIPWVIMSE 285
           MT SLL+VAV+F+ K F                      VV FSL +GAIPWVIMSE
Sbjct: 356 MTISLLIVAVSFFVKGFVPEDSSLYSILGILSVVGVVAMVVTFSLGMGAIPWVIMSE 412


>gb|EEE64808.1| hypothetical protein OsJ_19664 [Oryza sativa Japonica Group]
          Length = 500

 Score =  123 bits (308), Expect = 1e-25
 Identities = 64/117 (54%), Positives = 86/117 (73%), Gaps = 22/117 (18%)
 Frame = +1

Query: 1   LSGINGILFYSSNIFKAAGISSSNVATLGL*VIQVLATGVTTWLVDKAGHRLLLIVS*SG 180
           LSG+NGILFY+++IFKAAG+++SN+AT GL V+QV+ATGVTTWL DKAG RLLLI+S +G
Sbjct: 310 LSGVNGILFYAASIFKAAGLTNSNLATFGLGVVQVVATGVTTWLTDKAGRRLLLIISTTG 369

Query: 181 MTASLLLVAVAFYWK----------------------SFVVFFSLRIGAIPWVIMSE 285
           MT +L++V+V+F+ K                      +FV+ FSL +GAIPW+IMSE
Sbjct: 370 MTITLVVVSVSFFVKDNITNGSHLYSVMSMLSLVGLVAFVISFSLGLGAIPWIIMSE 426


Top