BLASTX nr result

ID: Coptis24_contig00003634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003634
         (1670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527677.1| arf gtpase-activating protein, putative [Ric...   559   e-157
ref|XP_002329561.1| predicted protein [Populus trichocarpa] gi|2...   540   e-151
ref|XP_002326525.1| predicted protein [Populus trichocarpa] gi|2...   539   e-151
ref|XP_003516792.1| PREDICTED: probable ADP-ribosylation factor ...   531   e-148
ref|XP_002278066.2| PREDICTED: probable ADP-ribosylation factor ...   531   e-148

>ref|XP_002527677.1| arf gtpase-activating protein, putative [Ricinus communis]
            gi|223532982|gb|EEF34748.1| arf gtpase-activating
            protein, putative [Ricinus communis]
          Length = 404

 Score =  559 bits (1441), Expect = e-157
 Identities = 294/410 (71%), Positives = 324/410 (79%), Gaps = 1/410 (0%)
 Frame = -2

Query: 1531 MASENFSDKNAIFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHVS 1352
            MASENF+DKN +FRKLKAKS+NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVH+S
Sbjct: 1    MASENFTDKNVVFRKLKAKSDNKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60

Query: 1351 FVRSTNLDSWSPEQLKMMSFGGNNRGHVFFKQHGWTDGGKIEAKYTSRAADLYRQILSKE 1172
            FVRSTNLDSWSPEQLK+MSFGGNNR   FFKQHGWTDGGKIEAKYTSRAADLYRQILSKE
Sbjct: 61   FVRSTNLDSWSPEQLKVMSFGGNNRAQAFFKQHGWTDGGKIEAKYTSRAADLYRQILSKE 120

Query: 1171 VAKSSTEEAGLPSSPVASQSTHVANGFSDVKAAXXXXXXXXXXXETPEVSALPKVSHPVV 992
            VAKS  E+AGLPSSPVASQS   +NGF DVK             ETP+V   PKVSHP++
Sbjct: 121  VAKSMAEDAGLPSSPVASQSAQASNGFPDVKTNESPEESSLGKQETPDVPPPPKVSHPII 180

Query: 991  TSSLKKPLGAKRTGTKTGGLGVRKLTTKSSESLYDQKXXXXXXXXXXXXXXXXXXXXXXX 812
            TS++KKPLGAKRTG KTGGLG RKLTTK SESLYDQK                       
Sbjct: 181  TSTVKKPLGAKRTG-KTGGLGARKLTTKPSESLYDQKPEEPPLPVPAATNNTPKAGTS-- 237

Query: 811  SYYPSRFEYVENMQSANNSAVAP-VISHVSPPKSSSFFEDFGMDSGFXXXXXXXXXXXXX 635
              + SRFEYV+N+QS    +  P VISHVSPPKSSSFF +FGMDSGF             
Sbjct: 238  --FTSRFEYVDNVQSTELISGGPQVISHVSPPKSSSFFAEFGMDSGFQKKSSNNSSKVQI 295

Query: 634  QETDEARKKFSNAKSISSAQFFGDQNKSKDMDAQASLQKFTGSTAISSADLFGKDMDDSG 455
            QETDEARKKFSNAKSISSAQFFGDQNK+ D+D+Q SLQKF+GS+AISSADLFG D  D  
Sbjct: 296  QETDEARKKFSNAKSISSAQFFGDQNKATDIDSQVSLQKFSGSSAISSADLFG-DSSDHS 354

Query: 454  LDVTAADLINRLSFQASQDLSSLKNIAGETGKKLTSMASTFMTDLQDRIL 305
            +D+ A+DLINR+SFQA QD+SSLKNIAGETGKKL+S+AST +TDLQDRIL
Sbjct: 355  IDLAASDLINRISFQAQQDISSLKNIAGETGKKLSSLASTLITDLQDRIL 404


>ref|XP_002329561.1| predicted protein [Populus trichocarpa] gi|222870270|gb|EEF07401.1|
            predicted protein [Populus trichocarpa]
          Length = 404

 Score =  540 bits (1391), Expect = e-151
 Identities = 287/410 (70%), Positives = 318/410 (77%), Gaps = 1/410 (0%)
 Frame = -2

Query: 1531 MASENFSDKNAIFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHVS 1352
            MASENF+DKN +FRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSA HRSLGVH+S
Sbjct: 1    MASENFTDKNVVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAFHRSLGVHIS 60

Query: 1351 FVRSTNLDSWSPEQLKMMSFGGNNRGHVFFKQHGWTDGGKIEAKYTSRAADLYRQILSKE 1172
            FVRSTNLDSWSPEQL+ MSFGGNNR  +FFKQHGW+DGGK EAKYTSRAA+LYRQ+LSKE
Sbjct: 61   FVRSTNLDSWSPEQLRTMSFGGNNRAQIFFKQHGWSDGGKTEAKYTSRAAELYRQLLSKE 120

Query: 1171 VAKSSTEEAGLPSSPVASQSTHVANGFSDVKAAXXXXXXXXXXXETPEVSALPKVSHPVV 992
            VAKS TE+AGLPSSPVASQ+   ANG  DVK             ETP++   PK SH V+
Sbjct: 121  VAKSMTEDAGLPSSPVASQAAQAANGLPDVKINDTPKESSVGKQETPDIVRSPKASHTVI 180

Query: 991  TSSLKKPLGAKRTGTKTGGLGVRKLTTKSSESLYDQKXXXXXXXXXXXXXXXXXXXXXXX 812
            TSS+KKPLGAKRTG KTGGLG RKLT K SE+LYDQK                       
Sbjct: 181  TSSVKKPLGAKRTG-KTGGLGARKLTVKPSENLYDQKPEEPALPVPSTTNNTTTKSGTS- 238

Query: 811  SYYPSRFEYVENMQSANNSAVAP-VISHVSPPKSSSFFEDFGMDSGFXXXXXXXXXXXXX 635
              + SRFEYV+N+Q A   +  P VISHVSPPKSSSFF +FGMDSGF             
Sbjct: 239  --FASRFEYVDNVQPAELISGDPQVISHVSPPKSSSFFAEFGMDSGFPKKGSSNSSKVQI 296

Query: 634  QETDEARKKFSNAKSISSAQFFGDQNKSKDMDAQASLQKFTGSTAISSADLFGKDMDDSG 455
            QETDEARKKF+NAKSISSAQ+FGDQNK+ D DAQ SLQKF+GS+AISSADLFG   DD  
Sbjct: 297  QETDEARKKFTNAKSISSAQYFGDQNKA-DADAQVSLQKFSGSSAISSADLFGHS-DDQT 354

Query: 454  LDVTAADLINRLSFQASQDLSSLKNIAGETGKKLTSMASTFMTDLQDRIL 305
            +D+ A+DLINR+SFQA QD+SSLKNIAGETGKKL+S ASTFMTDLQDRIL
Sbjct: 355  IDLAASDLINRISFQAQQDISSLKNIAGETGKKLSSFASTFMTDLQDRIL 404


>ref|XP_002326525.1| predicted protein [Populus trichocarpa] gi|222833847|gb|EEE72324.1|
            predicted protein [Populus trichocarpa]
          Length = 406

 Score =  539 bits (1389), Expect = e-151
 Identities = 288/410 (70%), Positives = 318/410 (77%), Gaps = 1/410 (0%)
 Frame = -2

Query: 1531 MASENFSDKNAIFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHVS 1352
            MASENF+DKN +FRKLKAKS+NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVH+S
Sbjct: 1    MASENFTDKNVVFRKLKAKSDNKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60

Query: 1351 FVRSTNLDSWSPEQLKMMSFGGNNRGHVFFKQHGWTDGGKIEAKYTSRAADLYRQILSKE 1172
            FVRSTNLDSWSPEQL+ MSFGGNNR H FFKQHGWTDGG+IEAKYTSRAA+LYRQILSKE
Sbjct: 61   FVRSTNLDSWSPEQLRTMSFGGNNRAHAFFKQHGWTDGGEIEAKYTSRAAELYRQILSKE 120

Query: 1171 VAKSSTEEAGLPSSPVASQSTHVANGFSDVKAAXXXXXXXXXXXETPEVSALPKVSHPVV 992
            VAKS  EEAGLPSSPV S+S    NG  DVK             ETP++   PK S  V+
Sbjct: 121  VAKSMAEEAGLPSSPVTSKSAQAGNGLPDVKINDAPKESSLGKQETPDLVRSPKASRSVI 180

Query: 991  TSSLKKPLGAKRTGTKTGGLGVRKLTTKSSESLYDQKXXXXXXXXXXXXXXXXXXXXXXX 812
            TSS+KKPLGAKRTG KTGGLG RKL TK SE+LYDQK                       
Sbjct: 181  TSSVKKPLGAKRTG-KTGGLGARKLATKPSENLYDQKPEEPALPVTSTTNNNNNNTKAGT 239

Query: 811  SYYPSRFEYVENMQSANNSAVAP-VISHVSPPKSSSFFEDFGMDSGFXXXXXXXXXXXXX 635
            S + SRFEYV+N+Q A   +  P VISHVSPPKSSSFF +FGM+SGF             
Sbjct: 240  S-FASRFEYVDNVQPAEMISGGPQVISHVSPPKSSSFFAEFGMESGFPKKGSSNYSKVQI 298

Query: 634  QETDEARKKFSNAKSISSAQFFGDQNKSKDMDAQASLQKFTGSTAISSADLFGKDMDDSG 455
            QETDEARKKFSNAKSISSAQFFGDQNK+ D DAQ SLQKF+GS+AISSADLFG+  DD  
Sbjct: 299  QETDEARKKFSNAKSISSAQFFGDQNKA-DADAQVSLQKFSGSSAISSADLFGQS-DDQS 356

Query: 454  LDVTAADLINRLSFQASQDLSSLKNIAGETGKKLTSMASTFMTDLQDRIL 305
            +D+ A+DLINR+SFQA QD+SSLKNIAGETGKKL+S ASTF+TDLQDRIL
Sbjct: 357  IDLAASDLINRISFQAQQDISSLKNIAGETGKKLSSFASTFITDLQDRIL 406


>ref|XP_003516792.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD8-like [Glycine max]
          Length = 403

 Score =  531 bits (1368), Expect = e-148
 Identities = 280/410 (68%), Positives = 316/410 (77%), Gaps = 1/410 (0%)
 Frame = -2

Query: 1531 MASENFSDKNAIFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHVS 1352
            MAS+ F+DKN +FRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVH+S
Sbjct: 1    MASDGFTDKNTVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60

Query: 1351 FVRSTNLDSWSPEQLKMMSFGGNNRGHVFFKQHGWTDGGKIEAKYTSRAADLYRQILSKE 1172
            FVRSTNLDSWSPEQLK MSFGGNNR H FFKQHGWTDGGKIEAKYTSRAADLYRQILSKE
Sbjct: 61   FVRSTNLDSWSPEQLKTMSFGGNNRAHGFFKQHGWTDGGKIEAKYTSRAADLYRQILSKE 120

Query: 1171 VAKSSTEEAGLPSSPVASQSTHVANGFSDVKAAXXXXXXXXXXXETPEVSALPKVSHPVV 992
            VAKS  E+ GLPSSPVASQS    NG  +VK             E PE ++ P+ SH V+
Sbjct: 121  VAKSMAEDGGLPSSPVASQSAQGVNGLPEVKTNEVPKENTLEKPEKPESTSSPRASHSVI 180

Query: 991  TSSLKKPLGAKRTGTKTGGLGVRKLTTKSSESLYDQKXXXXXXXXXXXXXXXXXXXXXXX 812
            + ++KKP+GAK+   K+GGLG RKLT K SESLY+QK                       
Sbjct: 181  SGTVKKPIGAKK-AVKSGGLGARKLTKKPSESLYEQKPEEPPAPVPSSTNSMPAGPSP-- 237

Query: 811  SYYPSRFEYVENMQSAN-NSAVAPVISHVSPPKSSSFFEDFGMDSGFXXXXXXXXXXXXX 635
                SRFEYVEN+QS++ N+  + V+SHVSPPKSSSFF DFGMD GF             
Sbjct: 238  ---TSRFEYVENVQSSDLNTGGSHVLSHVSPPKSSSFFADFGMDGGFPKKSGPSSSKVQI 294

Query: 634  QETDEARKKFSNAKSISSAQFFGDQNKSKDMDAQASLQKFTGSTAISSADLFGKDMDDSG 455
            QETDEAR+KFSNAKSISS+QFFGDQNK+ D+D+QA+L KF+GS+AISSADLFG D  D+ 
Sbjct: 295  QETDEARRKFSNAKSISSSQFFGDQNKAADVDSQATLSKFSGSSAISSADLFG-DSRDNN 353

Query: 454  LDVTAADLINRLSFQASQDLSSLKNIAGETGKKLTSMASTFMTDLQDRIL 305
            +D+TA DLINRLSFQA QDLSSLKNIAGETGKKL+S+AST MTDLQDRIL
Sbjct: 354  IDLTAGDLINRLSFQAQQDLSSLKNIAGETGKKLSSLASTLMTDLQDRIL 403


>ref|XP_002278066.2| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD8-like [Vitis vinifera] gi|297742095|emb|CBI33882.3|
            unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  531 bits (1368), Expect = e-148
 Identities = 278/410 (67%), Positives = 316/410 (77%), Gaps = 1/410 (0%)
 Frame = -2

Query: 1531 MASENFSDKNAIFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHVS 1352
            MASE F+DKNA+FRKLKAKS+NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVH+S
Sbjct: 1    MASEGFTDKNAVFRKLKAKSDNKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS 60

Query: 1351 FVRSTNLDSWSPEQLKMMSFGGNNRGHVFFKQHGWTDGGKIEAKYTSRAADLYRQILSKE 1172
            FVRSTNLDSWS EQLKMMSFGGNNR   FFKQHGW+DGGKIEAKYTSRAA+LYRQ+LSKE
Sbjct: 61   FVRSTNLDSWSAEQLKMMSFGGNNRAQAFFKQHGWSDGGKIEAKYTSRAAELYRQLLSKE 120

Query: 1171 VAKSSTEEAGLPSSPVASQSTHVANGFSDVKAAXXXXXXXXXXXETPEVSALPKVSHPVV 992
            VAKS  E+AGLPSSPVASQS    NG +D K             E  +V   PK  H V+
Sbjct: 121  VAKSVAEDAGLPSSPVASQSAQATNGLADFKINEAPKESSLGKQEASDVPVSPKAPHTVM 180

Query: 991  TSSLKKPLGAKRTGTKTGGLGVRKLTTKSSESLYDQKXXXXXXXXXXXXXXXXXXXXXXX 812
            +SS+KKP+GAKRTG K+ GLG RKLTTK SE+LY+QK                       
Sbjct: 181  SSSVKKPIGAKRTG-KSSGLGARKLTTKPSENLYEQKPEEPSVPVSTSTNNTPSVGSS-- 237

Query: 811  SYYPSRFEYVENMQSAN-NSAVAPVISHVSPPKSSSFFEDFGMDSGFXXXXXXXXXXXXX 635
              + SRFEY+EN+QS+  NS    V+SHVSPPKSSSFF ++GMDSGF             
Sbjct: 238  --FASRFEYIENVQSSEMNSGGTHVLSHVSPPKSSSFFAEYGMDSGFQKKASSNSSKVQI 295

Query: 634  QETDEARKKFSNAKSISSAQFFGDQNKSKDMDAQASLQKFTGSTAISSADLFGKDMDDSG 455
            +E+DEAR+KFSNAKSISSAQ+FGD +K+ DMD+Q SLQKF+GSTAISSADLFG   D+S 
Sbjct: 296  EESDEARRKFSNAKSISSAQYFGDPSKANDMDSQVSLQKFSGSTAISSADLFGHSSDNSP 355

Query: 454  LDVTAADLINRLSFQASQDLSSLKNIAGETGKKLTSMASTFMTDLQDRIL 305
            LDV+A+DLINRLSFQA QD SSLK+IAGETGKKL+S+AST MTDLQDRIL
Sbjct: 356  LDVSASDLINRLSFQAQQDYSSLKSIAGETGKKLSSLASTLMTDLQDRIL 405


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