BLASTX nr result

ID: Coptis24_contig00003632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003632
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC10911.1| pathogenesis-related protein [Zinnia elegans]          96   2e-18
emb|CAB71301.2| vegetative storage protein, VSP [Cichorium intybus]    86   4e-15
sp|O49065.1|RAP_TAROF RecName: Full=Root allergen protein; Short...    75   6e-12
gb|AEL17175.1| pathogen-related protein PR10 [Tanacetum cinerari...    74   1e-11
emb|CAM31909.1| bet v 1 related allergen [Actinidia deliciosa]         70   1e-10

>dbj|BAC10911.1| pathogenesis-related protein [Zinnia elegans]
          Length = 158

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/72 (58%), Positives = 58/72 (80%)
 Frame = +3

Query: 9   MTTVSIEIEHPSSFPADKVFKAFTDFENIAPKAIPEVFKSVKTIEGTGGPGTIRLFTFGD 188
           M +V++E+E  S  P +KVFK F+DF+NIAPK  P+VFKS++T+EG G  G+++LFTFGD
Sbjct: 1   MVSVTLEVEVSSQIPVEKVFKVFSDFDNIAPKVNPQVFKSIETVEGDGDVGSVKLFTFGD 60

Query: 189 AVPYKSGKQRVD 224
           AVP+ SGK +VD
Sbjct: 61  AVPFTSGKCKVD 72


>emb|CAB71301.2| vegetative storage protein, VSP [Cichorium intybus]
          Length = 158

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/72 (54%), Positives = 51/72 (70%)
 Frame = +3

Query: 9   MTTVSIEIEHPSSFPADKVFKAFTDFENIAPKAIPEVFKSVKTIEGTGGPGTIRLFTFGD 188
           M  V++EIE  SS PA K+FK F+DF+ +APK  PE +K+V  IEG GG GTI+  T+GD
Sbjct: 1   MAVVTVEIEVSSSLPAAKLFKVFSDFDTLAPKVEPETYKAVNIIEGDGGVGTIKSITYGD 60

Query: 189 AVPYKSGKQRVD 224
            VP+ S K +VD
Sbjct: 61  GVPFTSSKHKVD 72


>sp|O49065.1|RAP_TAROF RecName: Full=Root allergen protein; Short=RAP
           gi|2707295|gb|AAB92255.1| root allergen protein
           [Taraxacum officinale]
          Length = 157

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
 Frame = +3

Query: 27  EIEHPSSFPADKVFKAFT-DFENIAPKAIPEVFKSVKTIEGTGGPGTIRLFTFGDAVPYK 203
           E E  SS     +FKAF  DF+ IAPKA PE +KS+KTIEG GG GTI+  T+ D VP+ 
Sbjct: 5   EFEITSSLSPSNIFKAFVIDFDTIAPKAEPETYKSIKTIEGDGGVGTIKSITYSDGVPFT 64

Query: 204 SGKQRVD 224
           S K +VD
Sbjct: 65  SSKHKVD 71


>gb|AEL17175.1| pathogen-related protein PR10 [Tanacetum cinerariifolium]
          Length = 157

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/72 (47%), Positives = 49/72 (68%)
 Frame = +3

Query: 9   MTTVSIEIEHPSSFPADKVFKAFTDFENIAPKAIPEVFKSVKTIEGTGGPGTIRLFTFGD 188
           M+ ++ E E  SS PADK+FK   DF+ +A K  P+ FKS+  I+G GG G+I+  T+GD
Sbjct: 1   MSVINREFEVRSSLPADKLFKLCLDFDTLAAKIEPQAFKSIDLIKGDGGVGSIKRTTYGD 60

Query: 189 AVPYKSGKQRVD 224
           AVP+ S K ++D
Sbjct: 61  AVPFTSAKYKID 72


>emb|CAM31909.1| bet v 1 related allergen [Actinidia deliciosa]
          Length = 157

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
 Frame = +3

Query: 9   MTTVSIEIEHPSSFPADKVFKAFT-DFENIAPKAIPEVFKSVKTIEGTGGPGTIRLFTFG 185
           M  ++ ++E PSS  A+K+FKAF  D + I PKA+P     V+T+EG GG GTI+L TFG
Sbjct: 1   MGAITYDMEIPSSISAEKMFKAFVLDGDTIIPKALPHAITGVQTLEGDGGVGTIKLTTFG 60

Query: 186 DAVPYKSGKQRVD 224
           +   +KS K R+D
Sbjct: 61  EGSVHKSVKHRID 73


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