BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003630
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154636.1| PREDICTED: 60S ribosomal protein L13a-4-like...   268   1e-69
ref|NP_001130808.1| uncharacterized protein LOC100191912 [Zea ma...   268   2e-69
gb|ACF79169.1| unknown [Zea mays] gi|414872896|tpg|DAA51453.1| T...   268   2e-69
pdb|3IZR|K Chain K, Localization Of The Large Subunit Ribosomal ...   266   4e-69
gb|ACN36734.1| unknown [Zea mays] gi|413933029|gb|AFW67580.1| hy...   265   9e-69

>ref|XP_004154636.1| PREDICTED: 60S ribosomal protein L13a-4-like isoform 1 [Cucumis
           sativus]
          Length = 241

 Score =  268 bits (686), Expect = 1e-69
 Identities = 132/155 (85%), Positives = 139/155 (89%)
 Frame = -1

Query: 885 QERKVKMVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQRVVVVRCEEICLSGGLVR 706
           + R  KMVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQ+VVVVRCEEIC+SGGLVR
Sbjct: 28  KNRNKKMVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVR 87

Query: 705 QKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXAYEGVP 526
           QKMKY+RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKT           AYEGVP
Sbjct: 88  QKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVP 147

Query: 525 PPYDKIKRMVIPDAIKVLRLQPGHKYCLLGQLSHE 421
           PPYDK+KRMVIPDA+KVLRLQ GHKYCLLG+LS E
Sbjct: 148 PPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSE 182


>ref|NP_001130808.1| uncharacterized protein LOC100191912 [Zea mays]
           gi|195606206|gb|ACG24933.1| 60S ribosomal protein L13a
           [Zea mays]
          Length = 206

 Score =  268 bits (684), Expect = 2e-69
 Identities = 129/149 (86%), Positives = 135/149 (90%)
 Frame = -1

Query: 867 MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 688
           MVSGSG+CAKR+VVDARHHMLGRLSSIIAKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYL
Sbjct: 1   MVSGSGVCAKRIVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICMSGGLVRQKMKYL 60

Query: 687 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKI 508
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKT            YEGVPPPYDK 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGEAALARLKTYEGVPPPYDKT 120

Query: 507 KRMVIPDAIKVLRLQPGHKYCLLGQLSHE 421
           KRMVIPDA+KVLRLQPGHKYCLLG+LS E
Sbjct: 121 KRMVIPDALKVLRLQPGHKYCLLGELSKE 149


>gb|ACF79169.1| unknown [Zea mays] gi|414872896|tpg|DAA51453.1| TPA: ribosomal
           protein L13A-like protein [Zea mays]
          Length = 206

 Score =  268 bits (684), Expect = 2e-69
 Identities = 129/149 (86%), Positives = 135/149 (90%)
 Frame = -1

Query: 867 MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 688
           MVSGSG+CAKR+VVDARHHMLGRLSSIIAKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYL
Sbjct: 1   MVSGSGVCAKRIVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICMSGGLVRQKMKYL 60

Query: 687 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKI 508
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKT            YEGVPPPYDK 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGEAALARLKTYEGVPPPYDKT 120

Query: 507 KRMVIPDAIKVLRLQPGHKYCLLGQLSHE 421
           KRMVIPDA+KVLRLQPGHKYCLLG+LS E
Sbjct: 121 KRMVIPDALKVLRLQPGHKYCLLGELSKE 149


>pdb|3IZR|K Chain K, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome gi|57471706|gb|AAW50984.1| ribosomal protein
           L13a [Triticum aestivum] gi|326516494|dbj|BAJ92402.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 206

 Score =  266 bits (681), Expect = 4e-69
 Identities = 129/149 (86%), Positives = 136/149 (91%)
 Frame = -1

Query: 867 MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 688
           MVSGSG+CAKRVVVDARHHMLGRL+SI+AKELLNGQRVVVVRCEEIC+SGGLVRQKMKYL
Sbjct: 1   MVSGSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYL 60

Query: 687 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKI 508
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKT           AYEGVPPPYD+ 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTARGEAALARLKAYEGVPPPYDRT 120

Query: 507 KRMVIPDAIKVLRLQPGHKYCLLGQLSHE 421
           KRMVIPDA+KVLRLQPGH+YCLLGQLS E
Sbjct: 121 KRMVIPDALKVLRLQPGHRYCLLGQLSKE 149


>gb|ACN36734.1| unknown [Zea mays] gi|413933029|gb|AFW67580.1| hypothetical protein
           ZEAMMB73_211853 [Zea mays]
          Length = 179

 Score =  265 bits (678), Expect = 9e-69
 Identities = 127/149 (85%), Positives = 135/149 (90%)
 Frame = -1

Query: 867 MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 688
           MVSGSG+CAKR+VVDARHHMLGRLSSIIAKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYL
Sbjct: 1   MVSGSGVCAKRIVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICMSGGLVRQKMKYL 60

Query: 687 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXAYEGVPPPYDKI 508
           RFLRKRMNTKPSHGPIHFRAP+KILWRTIRGMIPHKT            YEGVPPPYDK 
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGEAALARLKTYEGVPPPYDKT 120

Query: 507 KRMVIPDAIKVLRLQPGHKYCLLGQLSHE 421
           KR+VIPDA+KVLRLQPGHKYCLLG+LS E
Sbjct: 121 KRLVIPDALKVLRLQPGHKYCLLGELSKE 149