BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003602
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519577.1| Eukaryotic translation initiation factor 3 s...   175   1e-41
gb|ABK92969.1| unknown [Populus trichocarpa]                          174   1e-41
ref|XP_002305897.1| predicted protein [Populus trichocarpa] gi|2...   173   4e-41
ref|XP_004155737.1| PREDICTED: eukaryotic translation initiation...   171   1e-40
ref|XP_004140297.1| PREDICTED: eukaryotic translation initiation...   171   1e-40

>ref|XP_002519577.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223541235|gb|EEF42788.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 222

 Score =  175 bits (443), Expect = 1e-41
 Identities = 106/218 (48%), Positives = 131/218 (60%), Gaps = 31/218 (14%)
 Frame = +1

Query: 19  EDGPIPPVMEKELPKYAYNDEDVEDNEEKSTLA----PAP------------KQNTRKSV 150
           ED  IPP++ KE PK  ++DEDV+DN+ K +      PAP            K+   KS+
Sbjct: 5   EDEQIPPLILKEQPKSKWDDEDVDDNDVKESWEDEDEPAPEPVAKPPPEKATKKPVTKSI 64

Query: 151 EKKGTNE---------NPLAEKLRQQRLVEEADYKLTTELFGNTDDEKSLDNFIPKSESD 303
           EKKG            +P+AEKLRQQRLVEEADY+ TTELFG   DEK+LDNFIPKSESD
Sbjct: 65  EKKGKTVVAKEESQPLDPVAEKLRQQRLVEEADYRSTTELFGKRGDEKTLDNFIPKSESD 124

Query: 304 FSEYAQLISHKVLPFEKSSHYVELVKDVMRLLLTPMKAEDAKEVASSITEIVXXXXXXXX 483
           F EYA+L+SHK+ P+EKS HY+ L+K VMRL +T MKA DAK+VASS+T I         
Sbjct: 125 FLEYAELVSHKLRPYEKSFHYIGLLKAVMRLSMTAMKAADAKDVASSVTAIANEKLKAEK 184

Query: 484 XXXXGINKTAAK------KPELHNVVGDYDSQVADDFI 579
               G  K   K      KP+   VV  YD+    DF+
Sbjct: 185 EANAGKKKGGKKKQLHVDKPDEDLVVDSYDALDDYDFM 222


>gb|ABK92969.1| unknown [Populus trichocarpa]
          Length = 222

 Score =  174 bits (442), Expect = 1e-41
 Identities = 99/196 (50%), Positives = 126/196 (64%), Gaps = 24/196 (12%)
 Frame = +1

Query: 19  EDGPIPPVMEKELPKYAYNDEDVEDNEEKSTL--------AP--------APKQNTRKSV 150
           ED  +PP++ K+ PK  ++DEDV++++ K +         AP        APK+   KS 
Sbjct: 5   EDEQVPPLVAKDQPKSKWDDEDVDEDDVKESWEDEDEPDPAPVVKPPPEMAPKKPAVKST 64

Query: 151 EKKGTNEN--------PLAEKLRQQRLVEEADYKLTTELFGNTDDEKSLDNFIPKSESDF 306
           EKKG   +        PLAEKLRQQRLVEEAD++ T ELFG  DDEKSLD+FIPKSESDF
Sbjct: 65  EKKGNTTDVVKDQPLDPLAEKLRQQRLVEEADFRSTAELFGKKDDEKSLDSFIPKSESDF 124

Query: 307 SEYAQLISHKVLPFEKSSHYVELVKDVMRLLLTPMKAEDAKEVASSITEIVXXXXXXXXX 486
            EYA+LIS+K+ PFEKS HY+ L+K VMRL +T MKA DAKEV++S++ I          
Sbjct: 125 LEYAELISNKLRPFEKSYHYIHLLKAVMRLSMTSMKAADAKEVSTSVSAIANEKIKAEKE 184

Query: 487 XXXGINKTAAKKPELH 534
              G  KTA KK +LH
Sbjct: 185 ANTGKKKTAGKKKQLH 200


>ref|XP_002305897.1| predicted protein [Populus trichocarpa] gi|222848861|gb|EEE86408.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  173 bits (438), Expect = 4e-41
 Identities = 98/196 (50%), Positives = 125/196 (63%), Gaps = 24/196 (12%)
 Frame = +1

Query: 19  EDGPIPPVMEKELPKYAYNDEDVEDNEEKSTL--------AP--------APKQNTRKSV 150
           ED  +PP++ K+ PK  ++DEDV++++ K +         AP        APK+   KS 
Sbjct: 5   EDEQVPPLVAKDQPKSKWDDEDVDEDDVKESWEDEDEPDPAPVVKPPPEMAPKKPAVKST 64

Query: 151 EKKGTNEN--------PLAEKLRQQRLVEEADYKLTTELFGNTDDEKSLDNFIPKSESDF 306
           EKKG   +        PLAEKLRQQRLVEEAD++ T ELFG  DDEKSLD+FIPKSESDF
Sbjct: 65  EKKGNTTDVVKDQPLDPLAEKLRQQRLVEEADFRSTAELFGKKDDEKSLDSFIPKSESDF 124

Query: 307 SEYAQLISHKVLPFEKSSHYVELVKDVMRLLLTPMKAEDAKEVASSITEIVXXXXXXXXX 486
            EYA+LIS+K+ PFEKS HY+ L+K VMRL +T MKA DAKEV++S++ I          
Sbjct: 125 LEYAELISNKLRPFEKSYHYIHLLKAVMRLSMTSMKAADAKEVSTSVSAIANEKIKAEKE 184

Query: 487 XXXGINKTAAKKPELH 534
              G  KT  KK +LH
Sbjct: 185 ANTGKKKTGGKKKQLH 200


>ref|XP_004155737.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-like [Cucumis sativus]
          Length = 220

 Score =  171 bits (433), Expect = 1e-40
 Identities = 101/202 (50%), Positives = 126/202 (62%), Gaps = 23/202 (11%)
 Frame = +1

Query: 19  EDGPIPPVMEKELPKYAYNDEDVEDNEEKSTL--------AP-------APKQNTRKSVE 153
           +D  IPP ++KE PK  ++DEDV++N+ K +         AP       APK+   K+ E
Sbjct: 5   DDENIPP-LQKEQPKNKWDDEDVDENDVKESWEDEDEPAPAPVVKPPEAAPKKPAAKATE 63

Query: 154 KKGTNEN--------PLAEKLRQQRLVEEADYKLTTELFGNTDDEKSLDNFIPKSESDFS 309
           KKG   +        PLAEKLRQQRLVEEADYK TTELF    DEK+LDNFIPKSESDF 
Sbjct: 64  KKGKIVDVEPEQPLDPLAEKLRQQRLVEEADYKSTTELFKKKGDEKTLDNFIPKSESDFV 123

Query: 310 EYAQLISHKVLPFEKSSHYVELVKDVMRLLLTPMKAEDAKEVASSITEIVXXXXXXXXXX 489
           EYA+LISHK+ P+EKS HY+ L+KD +RL +  +KA DAK+VASSIT +           
Sbjct: 124 EYAELISHKLRPYEKSFHYINLLKDAIRLSMVSLKAADAKDVASSITALANEKLKAEKDA 183

Query: 490 XXGINKTAAKKPELHNVVGDYD 555
             G  KT+ KK +LH    D D
Sbjct: 184 NTGKKKTSVKKKQLHVEKADDD 205


>ref|XP_004140297.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-like [Cucumis sativus]
          Length = 220

 Score =  171 bits (433), Expect = 1e-40
 Identities = 101/202 (50%), Positives = 126/202 (62%), Gaps = 23/202 (11%)
 Frame = +1

Query: 19  EDGPIPPVMEKELPKYAYNDEDVEDNEEKSTL--------AP-------APKQNTRKSVE 153
           +D  IPP ++KE PK  ++DEDV++N+ K +         AP       APK+   K+ E
Sbjct: 5   DDENIPP-LQKEQPKNKWDDEDVDENDVKESWEDEDEPAPAPVVKPPEAAPKKPAAKATE 63

Query: 154 KKGTNEN--------PLAEKLRQQRLVEEADYKLTTELFGNTDDEKSLDNFIPKSESDFS 309
           KKG   +        PLAEKLRQQRLVEEADYK TTELF    DEK+LDNFIPKSESDF 
Sbjct: 64  KKGKIVDVEPERPLDPLAEKLRQQRLVEEADYKSTTELFKKKGDEKTLDNFIPKSESDFV 123

Query: 310 EYAQLISHKVLPFEKSSHYVELVKDVMRLLLTPMKAEDAKEVASSITEIVXXXXXXXXXX 489
           EYA+LISHK+ P+EKS HY+ L+KD +RL +  +KA DAK+VASSIT +           
Sbjct: 124 EYAELISHKLRPYEKSFHYINLLKDAIRLSMVSLKAADAKDVASSITALANEKLKAEKDA 183

Query: 490 XXGINKTAAKKPELHNVVGDYD 555
             G  KT+ KK +LH    D D
Sbjct: 184 NTGKKKTSVKKKQLHVEKADDD 205