BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003578
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [...   411   e-112
ref|XP_002283195.1| PREDICTED: proteasome subunit beta type-6 [V...   411   e-112
ref|XP_002266488.1| PREDICTED: proteasome subunit beta type-6 [V...   405   e-111
gb|AFK42116.1| unknown [Lotus japonicus]                              401   e-109
ref|XP_003522675.1| PREDICTED: proteasome subunit beta type-6-li...   399   e-109

>ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [Ricinus communis]
            gi|223532621|gb|EEF34407.1| proteasome subunit beta type
            6,9, putative [Ricinus communis]
          Length = 231

 Score =  411 bits (1057), Expect = e-112
 Identities = 199/230 (86%), Positives = 219/230 (95%)
 Frame = -2

Query: 1022 MDTNAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYLCRSGSAA 843
            MD  APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVY+CRSGSAA
Sbjct: 1    MDLKAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAA 60

Query: 842  DSQVVSDYVRHFLYQHTIQLGQPATVKVAANLIRLLSYSNKNMLETGLIVGGWDKYEGGK 663
            DSQ+VSDYVR+FL+QHTIQLGQPATVKVAANL+RL+SY+NKNMLETGLIVGGWDKY+GGK
Sbjct: 61   DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLISYNNKNMLETGLIVGGWDKYDGGK 120

Query: 662  IYSVPLGGTILEQPFAIXXXXXSYLYGFFDQAWKDGMTKDEAEKLVVKAVSLAIARDGAS 483
            IY +PLGGTI+EQPFAI     SYLYGFFDQAWK+GMTKDEAE+LVVKAVSLA+ARDGAS
Sbjct: 121  IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAMARDGAS 180

Query: 482  GGVIRTVIINSDGVTRNFYPGDTLPLWHDELEPCGSLLDILSSGSPEPMS 333
            GGV+RTVIINS+GVTRNFYPGD+LPLWH+ELEP  SLLDIL++ SPEPM+
Sbjct: 181  GGVVRTVIINSEGVTRNFYPGDSLPLWHEELEPQNSLLDILNASSPEPMN 230


>ref|XP_002283195.1| PREDICTED: proteasome subunit beta type-6 [Vitis vinifera]
          Length = 231

 Score =  411 bits (1057), Expect = e-112
 Identities = 199/230 (86%), Positives = 219/230 (95%)
 Frame = -2

Query: 1022 MDTNAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYLCRSGSAA 843
            MD NAPH+MGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVY+CRSGSAA
Sbjct: 1    MDLNAPHTMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSAA 60

Query: 842  DSQVVSDYVRHFLYQHTIQLGQPATVKVAANLIRLLSYSNKNMLETGLIVGGWDKYEGGK 663
            DSQ+VSDYVR+FL+QHTIQLGQPATVKVAANL+RL+SY+NKNMLETGLIVGGWDKYEGGK
Sbjct: 61   DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLVSYNNKNMLETGLIVGGWDKYEGGK 120

Query: 662  IYSVPLGGTILEQPFAIXXXXXSYLYGFFDQAWKDGMTKDEAEKLVVKAVSLAIARDGAS 483
            IY++PLGGTI+EQPFAI     +YLYGFFDQAWK+GMTKDEAE+LVVKAVSLAIARDGAS
Sbjct: 121  IYAIPLGGTIIEQPFAIGGSGSTYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDGAS 180

Query: 482  GGVIRTVIINSDGVTRNFYPGDTLPLWHDELEPCGSLLDILSSGSPEPMS 333
            GGVIRTVIINS+GVTRNFYPGD+LPLWH+EL P  SLL++L S SPEPM+
Sbjct: 181  GGVIRTVIINSEGVTRNFYPGDSLPLWHEELPPQNSLLELLHSSSPEPMN 230


>ref|XP_002266488.1| PREDICTED: proteasome subunit beta type-6 [Vitis vinifera]
            gi|297736018|emb|CBI24056.3| unnamed protein product
            [Vitis vinifera]
          Length = 232

 Score =  405 bits (1042), Expect = e-111
 Identities = 198/226 (87%), Positives = 214/226 (94%)
 Frame = -2

Query: 1013 NAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYLCRSGSAADSQ 834
            N PHSMGTTIIGVTYNGGVVLGADSRTSTG+YVANRASDKITQLTDNVYLCRSGSAADSQ
Sbjct: 5    NQPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQ 64

Query: 833  VVSDYVRHFLYQHTIQLGQPATVKVAANLIRLLSYSNKNMLETGLIVGGWDKYEGGKIYS 654
            ++SDYVR++L+QHTIQLGQPATVKVAANL+RL+SY+NKNML+TGLIVGGWDK+EGGKIY 
Sbjct: 65   ILSDYVRYYLHQHTIQLGQPATVKVAANLVRLISYNNKNMLQTGLIVGGWDKHEGGKIYG 124

Query: 653  VPLGGTILEQPFAIXXXXXSYLYGFFDQAWKDGMTKDEAEKLVVKAVSLAIARDGASGGV 474
            VPLGGTILEQPFAI     SYLYGFFDQ WK+GMTKDEAEKLVVKAVSLAIARDGASGGV
Sbjct: 125  VPLGGTILEQPFAIGGSGSSYLYGFFDQEWKEGMTKDEAEKLVVKAVSLAIARDGASGGV 184

Query: 473  IRTVIINSDGVTRNFYPGDTLPLWHDELEPCGSLLDILSSGSPEPM 336
            +RTV INS+GVT+NFYPGDTLPLWH+ELEP  SLLDILSS SPEPM
Sbjct: 185  VRTVTINSEGVTKNFYPGDTLPLWHEELEPQNSLLDILSSSSPEPM 230


>gb|AFK42116.1| unknown [Lotus japonicus]
          Length = 233

 Score =  401 bits (1030), Expect = e-109
 Identities = 199/231 (86%), Positives = 215/231 (93%)
 Frame = -2

Query: 1025 NMDTNAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYLCRSGSA 846
            N D +APHSMGTTIIGVTYNGGVVLGADSRTSTG+YVANRASDKITQLTDNVY+CRSGSA
Sbjct: 4    NFDLSAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSA 63

Query: 845  ADSQVVSDYVRHFLYQHTIQLGQPATVKVAANLIRLLSYSNKNMLETGLIVGGWDKYEGG 666
            ADSQVVSDYVR+FL+QHTIQLGQPATVKVAANL+RLLSY+NKN LETGLIVGGWDKYEGG
Sbjct: 64   ADSQVVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIVGGWDKYEGG 123

Query: 665  KIYSVPLGGTILEQPFAIXXXXXSYLYGFFDQAWKDGMTKDEAEKLVVKAVSLAIARDGA 486
            +I+ VPLGGTI++QPFAI     SYLYGFFDQAWKDGMTKDEAE LV KAVSLAIARDGA
Sbjct: 124  QIFGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKDGMTKDEAEDLVKKAVSLAIARDGA 183

Query: 485  SGGVIRTVIINSDGVTRNFYPGDTLPLWHDELEPCGSLLDILSSGSPEPMS 333
            SGGV+RTVIINS+GVTRNFYPGD LPLWH+ELEP  SLLDIL  G+PEPM+
Sbjct: 184  SGGVVRTVIINSEGVTRNFYPGDQLPLWHEELEPQNSLLDIL--GAPEPMN 232


>ref|XP_003522675.1| PREDICTED: proteasome subunit beta type-6-like [Glycine max]
          Length = 233

 Score =  399 bits (1024), Expect = e-109
 Identities = 197/230 (85%), Positives = 215/230 (93%)
 Frame = -2

Query: 1022 MDTNAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYLCRSGSAA 843
            +D +APHSMGTTIIGVTYNGGVVLGADSRTSTG+YVANRASDKITQLTDNVY+CRSGSAA
Sbjct: 5    VDFSAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAA 64

Query: 842  DSQVVSDYVRHFLYQHTIQLGQPATVKVAANLIRLLSYSNKNMLETGLIVGGWDKYEGGK 663
            DSQ+VSDYVR+FL+QHTIQLGQPATVKVAANL+RLLSY+NKN LETGLIVGGWDKYEGG+
Sbjct: 65   DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIVGGWDKYEGGQ 124

Query: 662  IYSVPLGGTILEQPFAIXXXXXSYLYGFFDQAWKDGMTKDEAEKLVVKAVSLAIARDGAS 483
            IY VPLGGTI++QPFAI     SYLYGFFDQAWK+GMTKDEAE LV KAVSLAIARDGAS
Sbjct: 125  IYGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEDLVKKAVSLAIARDGAS 184

Query: 482  GGVIRTVIINSDGVTRNFYPGDTLPLWHDELEPCGSLLDILSSGSPEPMS 333
            GGV+RTVIINS+GVTRNFYPGD LPLWH+E+EP  SLLDIL  G+PEPMS
Sbjct: 185  GGVVRTVIINSEGVTRNFYPGDQLPLWHEEMEPHNSLLDIL--GAPEPMS 232