BLASTX nr result

ID: Coptis24_contig00003565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003565
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276929.1| PREDICTED: uncharacterized protein LOC100250...   333   3e-93
ref|XP_004173484.1| PREDICTED: uncharacterized LOC101217840, par...   327   4e-87
ref|XP_004145910.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   327   4e-87
ref|XP_003556137.1| PREDICTED: uncharacterized protein LOC100808...   325   1e-86
ref|XP_003556136.1| PREDICTED: uncharacterized protein LOC100808...   325   1e-86

>ref|XP_002276929.1| PREDICTED: uncharacterized protein LOC100250094 [Vitis vinifera]
            gi|297742264|emb|CBI34413.3| unnamed protein product
            [Vitis vinifera]
          Length = 347

 Score =  333 bits (854), Expect(2) = 3e-93
 Identities = 163/226 (72%), Positives = 175/226 (77%)
 Frame = +1

Query: 526  TIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLLTDVAEGLAGIAILH 705
            TI QV+LLWI SFWFVGSW++PF  H  GFSK+SLTYRGQALYSLLTDVAEGLAGIAILH
Sbjct: 122  TILQVMLLWIVSFWFVGSWMIPFTAHVVGFSKESLTYRGQALYSLLTDVAEGLAGIAILH 181

Query: 706  RCLYRFRPLPSDWFQFSLRGKWQLDVGLGCLMFPLVNRLSQVNLNLVPHLXXXXXXXXXX 885
            RCL RF PLPSDWF+FSLRG W  DV +GCLMFPLVNRLSQ NL+L+P L          
Sbjct: 182  RCLSRFSPLPSDWFRFSLRGNWLADVAIGCLMFPLVNRLSQFNLDLLPLLPSTPVTLSSV 241

Query: 886  XXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPVWCSILVSSVVFALAH 1065
                 ARDP              P+WEEIVFRGFLLPSLTKYMPVWCSILVSSV FALAH
Sbjct: 242  EQSIMARDPVAMGLYALVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCSILVSSVAFALAH 301

Query: 1066 FNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLMK 1203
            FN QRMLPLIFLG+VMG +F RSRNL   MLLHSLWN FVFL+LMK
Sbjct: 302  FNVQRMLPLIFLGVVMGVIFARSRNLLPSMLLHSLWNGFVFLDLMK 347



 Score = 36.6 bits (83), Expect(2) = 3e-93
 Identities = 28/107 (26%), Positives = 46/107 (42%)
 Frame = +2

Query: 104 MANPCCHCLTTPLPSLVLPQFSKFKVLKQNNRIFTSLSNFRTLRVTEADSTSLYKKRKVC 283
           M + C H L+   PSL  P  S+ ++  +   ++   S FR   ++E+ S     K K+ 
Sbjct: 1   MWSSCSHALSR-CPSLP-PTISRLRLPNRPGTLYPLSSGFR---ISESHSKFPKSKWKIS 55

Query: 284 CFRHEEFASRGPXXXXXXXXXXXXXXXXXXXXXXXXXKDFVTTFQEA 424
           CFRHE+ +S  P                         KD+ ++F+EA
Sbjct: 56  CFRHEDSSSETPKSESIDDILSGELVKPEFNKPSTVQKDWASSFREA 102


>ref|XP_004173484.1| PREDICTED: uncharacterized LOC101217840, partial [Cucumis sativus]
          Length = 253

 Score =  327 bits (838), Expect = 4e-87
 Identities = 157/226 (69%), Positives = 175/226 (77%)
 Frame = +1

Query: 526  TIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLLTDVAEGLAGIAILH 705
            TI QV+LLW+ASFW +GSWI+P + H AG+ K+ +T+RGQALYSLLTDVAEGL G+AILH
Sbjct: 28   TIVQVMLLWVASFWVIGSWIIPIIAHTAGYRKEFMTHRGQALYSLLTDVAEGLTGMAILH 87

Query: 706  RCLYRFRPLPSDWFQFSLRGKWQLDVGLGCLMFPLVNRLSQVNLNLVPHLXXXXXXXXXX 885
            RCL RF PLPS WF+FS+ GKWQ DVGLGCLMFPLVNRLSQVNLNL+P L          
Sbjct: 88   RCLSRFHPLPSSWFKFSIEGKWQFDVGLGCLMFPLVNRLSQVNLNLLPVLPSTPITVSSV 147

Query: 886  XXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPVWCSILVSSVVFALAH 1065
                 ARDP              P+WEEIVFRGFLLPSLTKYMPVWCSILVSS+ FALAH
Sbjct: 148  EQSIVARDPVAMALYAVVVSVCAPIWEEIVFRGFLLPSLTKYMPVWCSILVSSIAFALAH 207

Query: 1066 FNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLMK 1203
            FN QRMLPLI LGMVMG V+ R+RNL   MLLHSLWNAFVFL+LMK
Sbjct: 208  FNMQRMLPLILLGMVMGTVYARTRNLLPSMLLHSLWNAFVFLDLMK 253


>ref|XP_004145910.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101217840
            [Cucumis sativus]
          Length = 366

 Score =  327 bits (838), Expect = 4e-87
 Identities = 157/226 (69%), Positives = 175/226 (77%)
 Frame = +1

Query: 526  TIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLLTDVAEGLAGIAILH 705
            TI QV+LLW+ASFW +GSWI+P + H AG+ K+ +T+RGQALYSLLTDVAEGL G+AILH
Sbjct: 141  TIVQVMLLWVASFWVIGSWIIPIIAHTAGYRKEFMTHRGQALYSLLTDVAEGLTGMAILH 200

Query: 706  RCLYRFRPLPSDWFQFSLRGKWQLDVGLGCLMFPLVNRLSQVNLNLVPHLXXXXXXXXXX 885
            RCL RF PLPS WF+FS+ GKWQ DVGLGCLMFPLVNRLSQVNLNL+P L          
Sbjct: 201  RCLSRFHPLPSSWFKFSIEGKWQFDVGLGCLMFPLVNRLSQVNLNLLPVLPSTPITVSSV 260

Query: 886  XXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPVWCSILVSSVVFALAH 1065
                 ARDP              P+WEEIVFRGFLLPSLTKYMPVWCSILVSS+ FALAH
Sbjct: 261  EQSIVARDPVAMALYAVVVSVCAPIWEEIVFRGFLLPSLTKYMPVWCSILVSSIAFALAH 320

Query: 1066 FNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLMK 1203
            FN QRMLPLI LGMVMG V+ R+RNL   MLLHSLWNAFVFL+LMK
Sbjct: 321  FNMQRMLPLILLGMVMGTVYARTRNLLPSMLLHSLWNAFVFLDLMK 366


>ref|XP_003556137.1| PREDICTED: uncharacterized protein LOC100808097 isoform 3 [Glycine
            max]
          Length = 360

 Score =  325 bits (833), Expect = 1e-86
 Identities = 159/226 (70%), Positives = 177/226 (78%)
 Frame = +1

Query: 526  TIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLLTDVAEGLAGIAILH 705
            TI QV+LLWIASFWFVGSWIVPFL + AGF K+SLTYRGQAL SLLTDVAEG+ GIAIL 
Sbjct: 135  TIVQVMLLWIASFWFVGSWIVPFLAYTAGFRKESLTYRGQALCSLLTDVAEGVVGIAILR 194

Query: 706  RCLYRFRPLPSDWFQFSLRGKWQLDVGLGCLMFPLVNRLSQVNLNLVPHLXXXXXXXXXX 885
             CL +F+PL SDWF+F ++GKWQ DVGLGCLMFPL+N+LSQ+NLNL+P L          
Sbjct: 195  HCLAKFQPLSSDWFKFEVKGKWQFDVGLGCLMFPLINQLSQMNLNLLPVLQYTPVTISSV 254

Query: 886  XXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPVWCSILVSSVVFALAH 1065
                 ARDP              P+WEEIVFRGFLLPSLTKYMPVW +ILVSS+ FALAH
Sbjct: 255  EQSIVARDPVAMALYAVVVSVCAPIWEEIVFRGFLLPSLTKYMPVWSAILVSSIAFALAH 314

Query: 1066 FNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLMK 1203
            FN QRMLPL+FLGMVMG VF RSRNLF  MLLHSLWNAFVFL+LMK
Sbjct: 315  FNIQRMLPLVFLGMVMGTVFVRSRNLFPSMLLHSLWNAFVFLDLMK 360


>ref|XP_003556136.1| PREDICTED: uncharacterized protein LOC100808097 isoform 2 [Glycine
            max]
          Length = 359

 Score =  325 bits (833), Expect = 1e-86
 Identities = 159/226 (70%), Positives = 177/226 (78%)
 Frame = +1

Query: 526  TIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLLTDVAEGLAGIAILH 705
            TI QV+LLWIASFWFVGSWIVPFL + AGF K+SLTYRGQAL SLLTDVAEG+ GIAIL 
Sbjct: 134  TIVQVMLLWIASFWFVGSWIVPFLAYTAGFRKESLTYRGQALCSLLTDVAEGVVGIAILR 193

Query: 706  RCLYRFRPLPSDWFQFSLRGKWQLDVGLGCLMFPLVNRLSQVNLNLVPHLXXXXXXXXXX 885
             CL +F+PL SDWF+F ++GKWQ DVGLGCLMFPL+N+LSQ+NLNL+P L          
Sbjct: 194  HCLAKFQPLSSDWFKFEVKGKWQFDVGLGCLMFPLINQLSQMNLNLLPVLQYTPVTISSV 253

Query: 886  XXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPVWCSILVSSVVFALAH 1065
                 ARDP              P+WEEIVFRGFLLPSLTKYMPVW +ILVSS+ FALAH
Sbjct: 254  EQSIVARDPVAMALYAVVVSVCAPIWEEIVFRGFLLPSLTKYMPVWSAILVSSIAFALAH 313

Query: 1066 FNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLMK 1203
            FN QRMLPL+FLGMVMG VF RSRNLF  MLLHSLWNAFVFL+LMK
Sbjct: 314  FNIQRMLPLVFLGMVMGTVFVRSRNLFPSMLLHSLWNAFVFLDLMK 359


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