BLASTX nr result

ID: Coptis24_contig00003562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003562
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280089.1| PREDICTED: GA-binding protein subunit beta-2...   214   1e-53
ref|XP_002313998.1| predicted protein [Populus trichocarpa] gi|2...   212   1e-52
ref|XP_002530899.1| ankyrin repeat-containing protein, putative ...   211   2e-52
gb|ABK93753.1| unknown [Populus trichocarpa]                          209   6e-52
ref|NP_001237580.1| uncharacterized protein LOC100306615 [Glycin...   205   9e-51

>ref|XP_002280089.1| PREDICTED: GA-binding protein subunit beta-2 [Vitis vinifera]
           gi|296083850|emb|CBI24238.3| unnamed protein product
           [Vitis vinifera]
          Length = 150

 Score =  214 bits (546), Expect = 1e-53
 Identities = 107/137 (78%), Positives = 122/137 (89%)
 Frame = +1

Query: 193 SGEGVDALLEAARYDDIDDLTSLASSGVPLDSKDSEGRTALHMAAANGHLNVVEFLIQNG 372
           S E V+ALLEAARYDDIDD+  +AS+GV LDSKDS+GRTALHMAAANGHL+VVEFLI +G
Sbjct: 12  SQENVEALLEAARYDDIDDVKIIASAGVSLDSKDSQGRTALHMAAANGHLDVVEFLISSG 71

Query: 373 VDLNAYNVEKNTALHWACLNGHIEVVKNLIMAGADLSILNSHERSPVDEAVSHGKMEVID 552
           VDLNA NVEKNT LHWACLNGHIEVVKNLI+AGA+++ LNSHER+P+DEAVS GKM+VID
Sbjct: 72  VDLNASNVEKNTPLHWACLNGHIEVVKNLILAGANVTALNSHERTPMDEAVSRGKMDVID 131

Query: 553 AINEAVAHAELNGVRVS 603
           AIN AVA  EL G+ VS
Sbjct: 132 AINAAVAQVELTGIGVS 148


>ref|XP_002313998.1| predicted protein [Populus trichocarpa] gi|222850406|gb|EEE87953.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score =  212 bits (539), Expect = 1e-52
 Identities = 106/135 (78%), Positives = 119/135 (88%)
 Frame = +1

Query: 199 EGVDALLEAARYDDIDDLTSLASSGVPLDSKDSEGRTALHMAAANGHLNVVEFLIQNGVD 378
           E VDALLEAARYDD +D+TSLASSGV LDSKDS+GRTALHMAAANGHL++VE+LI  GVD
Sbjct: 19  EIVDALLEAARYDDFEDITSLASSGVSLDSKDSQGRTALHMAAANGHLDIVEYLINQGVD 78

Query: 379 LNAYNVEKNTALHWACLNGHIEVVKNLIMAGADLSILNSHERSPVDEAVSHGKMEVIDAI 558
           LNA N EKNT LHWACLNGHIEVVK LI+AGA L ILNSHER+P+DEAV+ GK++VIDAI
Sbjct: 79  LNASNEEKNTPLHWACLNGHIEVVKKLILAGASLGILNSHERTPMDEAVTRGKLDVIDAI 138

Query: 559 NEAVAHAELNGVRVS 603
           N AVA  EL+GV VS
Sbjct: 139 NAAVAQQELSGVTVS 153


>ref|XP_002530899.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223529521|gb|EEF31475.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 156

 Score =  211 bits (537), Expect = 2e-52
 Identities = 109/148 (73%), Positives = 122/148 (82%), Gaps = 1/148 (0%)
 Frame = +1

Query: 157 MGVEEGNPVQ-QPSGEGVDALLEAARYDDIDDLTSLASSGVPLDSKDSEGRTALHMAAAN 333
           MG  E    Q + + E VDALLEAARYDDIDD+ SLASSG+ LDSKDS GRTALHMAAAN
Sbjct: 1   MGTAENQSEQLEATSESVDALLEAARYDDIDDIKSLASSGISLDSKDSFGRTALHMAAAN 60

Query: 334 GHLNVVEFLIQNGVDLNAYNVEKNTALHWACLNGHIEVVKNLIMAGADLSILNSHERSPV 513
           GHL++VE+LI  GVDLNA N EKNTALHWACLNGHIEVVK LI+AGA LS+LN HER+PV
Sbjct: 61  GHLDIVEYLISQGVDLNASNEEKNTALHWACLNGHIEVVKKLILAGASLSLLNCHERTPV 120

Query: 514 DEAVSHGKMEVIDAINEAVAHAELNGVR 597
           DEAV+  KM+VIDAIN AVA  EL GV+
Sbjct: 121 DEAVTREKMDVIDAINAAVAQLELAGVQ 148


>gb|ABK93753.1| unknown [Populus trichocarpa]
          Length = 153

 Score =  209 bits (532), Expect = 6e-52
 Identities = 105/135 (77%), Positives = 118/135 (87%)
 Frame = +1

Query: 199 EGVDALLEAARYDDIDDLTSLASSGVPLDSKDSEGRTALHMAAANGHLNVVEFLIQNGVD 378
           E VDALLEAARYDD +D+TSLASSGV LDSKDS+GRTALHMAAANGHL++VE+LI  GVD
Sbjct: 19  EIVDALLEAARYDDFEDITSLASSGVSLDSKDSQGRTALHMAAANGHLDIVEYLINQGVD 78

Query: 379 LNAYNVEKNTALHWACLNGHIEVVKNLIMAGADLSILNSHERSPVDEAVSHGKMEVIDAI 558
           LNA N EKNT LHWACLNGHIEVVK LI+AGA L ILNSHER+P+DEAV+ GK++VI AI
Sbjct: 79  LNASNEEKNTPLHWACLNGHIEVVKKLILAGASLGILNSHERTPMDEAVTRGKLDVIGAI 138

Query: 559 NEAVAHAELNGVRVS 603
           N AVA  EL+GV VS
Sbjct: 139 NAAVAQQELSGVTVS 153


>ref|NP_001237580.1| uncharacterized protein LOC100306615 [Glycine max]
           gi|255629083|gb|ACU14886.1| unknown [Glycine max]
          Length = 157

 Score =  205 bits (522), Expect = 9e-51
 Identities = 102/152 (67%), Positives = 122/152 (80%), Gaps = 4/152 (2%)
 Frame = +1

Query: 157 MGVEEGNPVQQP----SGEGVDALLEAARYDDIDDLTSLASSGVPLDSKDSEGRTALHMA 324
           MG  E N   Q     + E ++ALL+AARYDD+DD+ SL +SGVPLDSKD +GRTALHMA
Sbjct: 1   MGATEANTTLQARPETTSENIEALLDAARYDDMDDVKSLEASGVPLDSKDEQGRTALHMA 60

Query: 325 AANGHLNVVEFLIQNGVDLNAYNVEKNTALHWACLNGHIEVVKNLIMAGADLSILNSHER 504
           AANGH+++VE+LI  GVDLN+ N EKNT LHWACLNGH+E VK LIMAGA++S+LNSHER
Sbjct: 61  AANGHIDIVEYLISRGVDLNSPNEEKNTPLHWACLNGHVEAVKKLIMAGANVSVLNSHER 120

Query: 505 SPVDEAVSHGKMEVIDAINEAVAHAELNGVRV 600
           +P+DEAVS GK EV+DAINEAVA  EL G  V
Sbjct: 121 TPMDEAVSGGKPEVMDAINEAVALVELRGAMV 152


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