BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003548
         (1242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77350.1| hypothetical protein VITISV_007542 [Vitis vinifera]   394   e-107
ref|XP_002279513.1| PREDICTED: pre-mRNA-splicing factor syf2 iso...   391   e-106
ref|XP_002305528.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104
ref|XP_004147047.1| PREDICTED: pre-mRNA-splicing factor syf2-lik...   377   e-102
ref|NP_001142424.1| uncharacterized protein LOC100274600 [Zea ma...   366   6e-99

>emb|CAN77350.1| hypothetical protein VITISV_007542 [Vitis vinifera]
          Length = 295

 Score =  394 bits (1011), Expect = e-107
 Identities = 207/300 (69%), Positives = 228/300 (76%), Gaps = 4/300 (1%)
 Frame = -1

Query: 1050 EGRVHPKCINASNPYHECTDYCFLKIA----QQPSSAAGVQSPDHEEPHNNNNSLDEKDL 883
            E RVHP CINASNPYHEC +YCF KIA    Q     +GV   D + PH+     +E+  
Sbjct: 4    ERRVHPDCINASNPYHECVEYCFRKIAEAKAQMDKKESGVPDQD-KNPHDEGTDPEEQS- 61

Query: 882  HXXXXXXXXXXXXXXXXXXXDGSKLTGRQKKLFDLRLKMNEARKANQNAMVAEKKRIEAP 703
                                D ++LTGRQKKLF+LRLKMNEARKANQ AMVAEKK++EAP
Sbjct: 62   ------DDDNDQPVEEIEEVDFTQLTGRQKKLFELRLKMNEARKANQTAMVAEKKKMEAP 115

Query: 702  QETRGISKQKFNEERKKKIGRLLDANGLDMKKAYMLDTXXXXXXXXXXXXXXXXPFGWDV 523
             E+RGISKQK+ EERKKKIG+LLD NGLDMKKAYMLDT                PFGWDV
Sbjct: 116  PESRGISKQKWIEERKKKIGKLLDVNGLDMKKAYMLDTQEMAETKYKKWEKDPAPFGWDV 175

Query: 522  FNQKTLYDAYKKRTKNIVCDIEEYNKMKEADPEFYRDASSLQYGKSPKVSEAKIDKMVKE 343
            FNQKTLY+AYKKRTKNI  DI+EYNKMKEADPEFYR+ASSLQYGK+PK SE KIDKMVKE
Sbjct: 176  FNQKTLYNAYKKRTKNIEVDIDEYNKMKEADPEFYREASSLQYGKAPKCSEDKIDKMVKE 235

Query: 342  LHDRDDNRKAFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 163
            L DRD+ R++FSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
Sbjct: 236  LKDRDEKRQSFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 295


>ref|XP_002279513.1| PREDICTED: pre-mRNA-splicing factor syf2 isoform 2 [Vitis vinifera]
          Length = 295

 Score =  391 bits (1005), Expect = e-106
 Identities = 205/296 (69%), Positives = 227/296 (76%)
 Frame = -1

Query: 1050 EGRVHPKCINASNPYHECTDYCFLKIAQQPSSAAGVQSPDHEEPHNNNNSLDEKDLHXXX 871
            E RVHP CINASNPYHEC +YCF KIA+   + A +   +   P  + N+ DE       
Sbjct: 4    ERRVHPDCINASNPYHECVEYCFRKIAE---AKAQMDKKESGVPDQDKNTHDE-GTDPEE 59

Query: 870  XXXXXXXXXXXXXXXXDGSKLTGRQKKLFDLRLKMNEARKANQNAMVAEKKRIEAPQETR 691
                            D ++LTGRQKKLF+LRLKMNEARKANQ AMVAEKK++EAP E+R
Sbjct: 60   RSDDDNDQPVEEIEEVDFTQLTGRQKKLFELRLKMNEARKANQTAMVAEKKKMEAPPESR 119

Query: 690  GISKQKFNEERKKKIGRLLDANGLDMKKAYMLDTXXXXXXXXXXXXXXXXPFGWDVFNQK 511
            GISKQK+ EERKKKIG+LLD NGLDMKKAYMLDT                PFGWDVFNQK
Sbjct: 120  GISKQKWIEERKKKIGKLLDVNGLDMKKAYMLDTQEMAETKYKKWEKDPAPFGWDVFNQK 179

Query: 510  TLYDAYKKRTKNIVCDIEEYNKMKEADPEFYRDASSLQYGKSPKVSEAKIDKMVKELHDR 331
            TLY+AYKKRTKNI  DI+EYNKMKEADPEFYR+ASSLQYGK+PK SE KIDKMVKEL DR
Sbjct: 180  TLYNAYKKRTKNIEVDIDEYNKMKEADPEFYREASSLQYGKAPKCSEDKIDKMVKELKDR 239

Query: 330  DDNRKAFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 163
            D+ R++FSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
Sbjct: 240  DEKRQSFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 295


>ref|XP_002305528.1| predicted protein [Populus trichocarpa] gi|222848492|gb|EEE86039.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  384 bits (985), Expect = e-104
 Identities = 197/308 (63%), Positives = 228/308 (74%), Gaps = 11/308 (3%)
 Frame = -1

Query: 1053 EEGRVHPKCINASNPYHECTDYCFLKIAQQPSSA-----------AGVQSPDHEEPHNNN 907
            +E RVHP CINASNPYHEC +YCF+KIA+  + A            G+     + P    
Sbjct: 3    DERRVHPDCINASNPYHECVEYCFIKIAEAKARAEIKETEVVQAKGGIGWSSSQAPEQGE 62

Query: 906  NSLDEKDLHXXXXXXXXXXXXXXXXXXXDGSKLTGRQKKLFDLRLKMNEARKANQNAMVA 727
               +E+  H                     ++LTGR+KKLF+LRLKMNEARKANQ AMV+
Sbjct: 63   ELDEERPDHEHSEDDDDRAVLDNVEGDV--TQLTGRKKKLFELRLKMNEARKANQTAMVS 120

Query: 726  EKKRIEAPQETRGISKQKFNEERKKKIGRLLDANGLDMKKAYMLDTXXXXXXXXXXXXXX 547
            EKK++EAP E+RGISKQK+ E+RKKKIG+LLDANGLDM KAYMLDT              
Sbjct: 121  EKKKMEAPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEVKYKKWEKD 180

Query: 546  XXPFGWDVFNQKTLYDAYKKRTKNIVCDIEEYNKMKEADPEFYRDASSLQYGKSPKVSEA 367
              PFGWDVFNQKTLY+AYKKRTKN+  D+EEYNKMKEADPEFYR+ASSLQYGK+PK SE 
Sbjct: 181  PAPFGWDVFNQKTLYNAYKKRTKNVDVDLEEYNKMKEADPEFYREASSLQYGKAPKTSEE 240

Query: 366  KIDKMVKELHDRDDNRKAFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNL 187
            KI++MVKEL DRD+NRK+FSRRR+F +EKDIDSINDRNEHFNKKIERAFGKYTLEIKNNL
Sbjct: 241  KIERMVKELKDRDENRKSFSRRRRFRDEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNL 300

Query: 186  ERGTALPD 163
            ERGTALPD
Sbjct: 301  ERGTALPD 308


>ref|XP_004147047.1| PREDICTED: pre-mRNA-splicing factor syf2-like [Cucumis sativus]
            gi|449489629|ref|XP_004158369.1| PREDICTED:
            pre-mRNA-splicing factor syf2-like [Cucumis sativus]
          Length = 310

 Score =  377 bits (969), Expect = e-102
 Identities = 197/308 (63%), Positives = 225/308 (73%), Gaps = 11/308 (3%)
 Frame = -1

Query: 1053 EEGRVHPKCINASNPYHECTDYCF-----LKIAQQPSSAAGVQ------SPDHEEPHNNN 907
            +EGRVHP C NASNPYHEC++YCF     LK   Q +    VQ      S     P    
Sbjct: 3    DEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPETVQAGRSSGSSSFVPPDEYE 62

Query: 906  NSLDEKDLHXXXXXXXXXXXXXXXXXXXDGSKLTGRQKKLFDLRLKMNEARKANQNAMVA 727
            +  DEK                      D +KLTGR+KKLF++RLKMNEARKANQ A+ A
Sbjct: 63   DLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKANQTAIAA 122

Query: 726  EKKRIEAPQETRGISKQKFNEERKKKIGRLLDANGLDMKKAYMLDTXXXXXXXXXXXXXX 547
            EKK++E P E+RGISKQK+ E+RKKKIG+LLDANGLDM KAYMLDT              
Sbjct: 123  EKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKD 182

Query: 546  XXPFGWDVFNQKTLYDAYKKRTKNIVCDIEEYNKMKEADPEFYRDASSLQYGKSPKVSEA 367
              P+GWDVFNQKTLY+AYKKRTKN+  D+EEYNKMKE+DPEFYR+ASSLQYGK+PK+SE 
Sbjct: 183  PAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISED 242

Query: 366  KIDKMVKELHDRDDNRKAFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNL 187
            KID MVKEL DRD+ RK+FSRRRKFHE+KDIDSINDRNEHFNKKIERAFG+YTLEIKNNL
Sbjct: 243  KIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNL 302

Query: 186  ERGTALPD 163
            ERGTALPD
Sbjct: 303  ERGTALPD 310


>ref|NP_001142424.1| uncharacterized protein LOC100274600 [Zea mays]
            gi|194688472|gb|ACF78320.1| unknown [Zea mays]
            gi|194690672|gb|ACF79420.1| unknown [Zea mays]
            gi|194708756|gb|ACF88462.1| unknown [Zea mays]
            gi|413934897|gb|AFW69448.1| hypothetical protein
            ZEAMMB73_419782 [Zea mays]
          Length = 356

 Score =  366 bits (940), Expect = 6e-99
 Identities = 189/298 (63%), Positives = 219/298 (73%), Gaps = 1/298 (0%)
 Frame = -1

Query: 1053 EEGRVHPKCINASNPYHECTDYCFLKIAQQPSSAAGVQSPDHEEPHNNNNSLDEKDLHXX 874
            E+  VHP CINASNPYHEC+DYCF +IA   S A G++  + + P +   +    D    
Sbjct: 59   EQRTVHPDCINASNPYHECSDYCFKRIADAKSPACGLEREERQPPADVFAAAGMSDAVEQ 118

Query: 873  XXXXXXXXXXXXXXXXXDG-SKLTGRQKKLFDLRLKMNEARKANQNAMVAEKKRIEAPQE 697
                             DG  ++T +QKKLF+LRLKMNEARKANQ AMVAEKKR+E   E
Sbjct: 119  HRPIDNDSDEQEGAGPDDGYPQMTEKQKKLFELRLKMNEARKANQQAMVAEKKRMEPRGE 178

Query: 696  TRGISKQKFNEERKKKIGRLLDANGLDMKKAYMLDTXXXXXXXXXXXXXXXXPFGWDVFN 517
            +RG+SKQK+ ++RKKKIG+LLD+NGLDMK AYMLDT                P+GWDVFN
Sbjct: 179  SRGVSKQKWLDDRKKKIGKLLDSNGLDMKMAYMLDTQETAEAKYKKWEKEPAPYGWDVFN 238

Query: 516  QKTLYDAYKKRTKNIVCDIEEYNKMKEADPEFYRDASSLQYGKSPKVSEAKIDKMVKELH 337
            QKTLYDAYKKRTKNI  D+E YNK KEADPEFYRDASSLQYGK   V E  IDKMVKEL 
Sbjct: 239  QKTLYDAYKKRTKNIEVDMESYNKAKEADPEFYRDASSLQYGKVSNVPEENIDKMVKELR 298

Query: 336  DRDDNRKAFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 163
            +R++ RK+FSRRRKF+E+KDIDSINDRNEHFNKK+ERAFGKYTLEIKNNLERGTALPD
Sbjct: 299  EREEKRKSFSRRRKFNEDKDIDSINDRNEHFNKKVERAFGKYTLEIKNNLERGTALPD 356