BLASTX nr result
ID: Coptis24_contig00003546
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00003546 (314 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004168143.1| PREDICTED: uncharacterized protein At2g29880... 63 2e-08 ref|XP_004136161.1| PREDICTED: uncharacterized protein LOC101220... 62 4e-08 gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo] 62 4e-08 tpg|DAA63923.1| TPA: hypothetical protein ZEAMMB73_270569, parti... 61 1e-07 ref|XP_002301492.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 >ref|XP_004168143.1| PREDICTED: uncharacterized protein At2g29880-like [Cucumis sativus] Length = 353 Score = 63.2 bits (152), Expect = 2e-08 Identities = 33/90 (36%), Positives = 52/90 (57%) Frame = +2 Query: 11 RMKTLKRDYIAVKELLESTEFGFSYNQQTKCIDADRQAWDAYFRAHPAARHLKGRMFTYF 190 R+KTL+R Y A+ E+ + GF +N KCI A+++ +D + R+HPAA+ L + F Y+ Sbjct: 120 RIKTLQRSYQAIAEMRGPSCSGFGWNDDAKCIVAEKEFFDNWVRSHPAAKGLLNKPFPYY 179 Query: 191 AEACVIFGNDYSLHTPNVCESFGPVVGDTP 280 E +FG D + T E+F V + P Sbjct: 180 DEFAYVFGKDRA--TGAHVETFADVGSNVP 207 >ref|XP_004136161.1| PREDICTED: uncharacterized protein LOC101220968 [Cucumis sativus] gi|449505362|ref|XP_004162446.1| PREDICTED: uncharacterized protein LOC101224559 [Cucumis sativus] Length = 553 Score = 62.4 bits (150), Expect = 4e-08 Identities = 29/78 (37%), Positives = 47/78 (60%) Frame = +2 Query: 2 VRSRMKTLKRDYIAVKELLESTEFGFSYNQQTKCIDADRQAWDAYFRAHPAARHLKGRMF 181 +++R KTL+ Y AVK LL+ GFS+++ + + AD WD Y +AHP A + + Sbjct: 136 LKNRHKTLRNLYKAVKNLLDQR--GFSWDEVRQMVTADNNVWDEYVKAHPEAGSFRIKTI 193 Query: 182 TYFAEACVIFGNDYSLHT 235 Y+ + C+I+GN S H+ Sbjct: 194 PYYNDLCIIYGNATSSHS 211 >gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo] Length = 623 Score = 62.4 bits (150), Expect = 4e-08 Identities = 33/90 (36%), Positives = 51/90 (56%) Frame = +2 Query: 11 RMKTLKRDYIAVKELLESTEFGFSYNQQTKCIDADRQAWDAYFRAHPAARHLKGRMFTYF 190 R+KTLKR + A+ E+L GF +N + KCI A+++ +D + R+ PAA+ L F Y+ Sbjct: 387 RIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYY 446 Query: 191 AEACVIFGNDYSLHTPNVCESFGPVVGDTP 280 E +FG D + T E+F V + P Sbjct: 447 DELTYVFGRDRA--TGRFAETFADVGSNEP 474 >tpg|DAA63923.1| TPA: hypothetical protein ZEAMMB73_270569, partial [Zea mays] Length = 245 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/75 (41%), Positives = 45/75 (60%) Frame = +2 Query: 2 VRSRMKTLKRDYIAVKELLESTEFGFSYNQQTKCIDADRQAWDAYFRAHPAARHLKGRMF 181 V SR+K +KR Y ++K+++ ST GFS++ K I ++Q +D Y R HP A+ L G F Sbjct: 75 VDSRLKVMKRKYYSIKDMIAST--GFSWDDTRKMIQCEKQRYDEYCRDHPRAKGLYGVPF 132 Query: 182 TYFAEACVIFGNDYS 226 YF I+G D S Sbjct: 133 VYFDTFDAIYGKDSS 147 >ref|XP_002301492.1| predicted protein [Populus trichocarpa] gi|222843218|gb|EEE80765.1| predicted protein [Populus trichocarpa] Length = 423 Score = 59.3 bits (142), Expect = 3e-07 Identities = 27/72 (37%), Positives = 46/72 (63%) Frame = +2 Query: 2 VRSRMKTLKRDYIAVKELLESTEFGFSYNQQTKCIDADRQAWDAYFRAHPAARHLKGRMF 181 +++R KTL+ Y AVK+LLE GFS+++ + + AD WD Y + HP AR + + Sbjct: 49 LKNRHKTLRNLYKAVKKLLEYK--GFSWDENRQMVTADNNDWDEYIKIHPDARAFRIKTI 106 Query: 182 TYFAEACVIFGN 217 Y+++ C+I+G+ Sbjct: 107 PYYSDLCLIYGD 118