BLASTX nr result

ID: Coptis24_contig00003546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003546
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168143.1| PREDICTED: uncharacterized protein At2g29880...    63   2e-08
ref|XP_004136161.1| PREDICTED: uncharacterized protein LOC101220...    62   4e-08
gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]      62   4e-08
tpg|DAA63923.1| TPA: hypothetical protein ZEAMMB73_270569, parti...    61   1e-07
ref|XP_002301492.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_004168143.1| PREDICTED: uncharacterized protein At2g29880-like [Cucumis sativus]
          Length = 353

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/90 (36%), Positives = 52/90 (57%)
 Frame = +2

Query: 11  RMKTLKRDYIAVKELLESTEFGFSYNQQTKCIDADRQAWDAYFRAHPAARHLKGRMFTYF 190
           R+KTL+R Y A+ E+   +  GF +N   KCI A+++ +D + R+HPAA+ L  + F Y+
Sbjct: 120 RIKTLQRSYQAIAEMRGPSCSGFGWNDDAKCIVAEKEFFDNWVRSHPAAKGLLNKPFPYY 179

Query: 191 AEACVIFGNDYSLHTPNVCESFGPVVGDTP 280
            E   +FG D +  T    E+F  V  + P
Sbjct: 180 DEFAYVFGKDRA--TGAHVETFADVGSNVP 207


>ref|XP_004136161.1| PREDICTED: uncharacterized protein LOC101220968 [Cucumis sativus]
           gi|449505362|ref|XP_004162446.1| PREDICTED:
           uncharacterized protein LOC101224559 [Cucumis sativus]
          Length = 553

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/78 (37%), Positives = 47/78 (60%)
 Frame = +2

Query: 2   VRSRMKTLKRDYIAVKELLESTEFGFSYNQQTKCIDADRQAWDAYFRAHPAARHLKGRMF 181
           +++R KTL+  Y AVK LL+    GFS+++  + + AD   WD Y +AHP A   + +  
Sbjct: 136 LKNRHKTLRNLYKAVKNLLDQR--GFSWDEVRQMVTADNNVWDEYVKAHPEAGSFRIKTI 193

Query: 182 TYFAEACVIFGNDYSLHT 235
            Y+ + C+I+GN  S H+
Sbjct: 194 PYYNDLCIIYGNATSSHS 211


>gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 623

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/90 (36%), Positives = 51/90 (56%)
 Frame = +2

Query: 11  RMKTLKRDYIAVKELLESTEFGFSYNQQTKCIDADRQAWDAYFRAHPAARHLKGRMFTYF 190
           R+KTLKR + A+ E+L     GF +N + KCI A+++ +D + R+ PAA+ L    F Y+
Sbjct: 387 RIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYY 446

Query: 191 AEACVIFGNDYSLHTPNVCESFGPVVGDTP 280
            E   +FG D +  T    E+F  V  + P
Sbjct: 447 DELTYVFGRDRA--TGRFAETFADVGSNEP 474


>tpg|DAA63923.1| TPA: hypothetical protein ZEAMMB73_270569, partial [Zea mays]
          Length = 245

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/75 (41%), Positives = 45/75 (60%)
 Frame = +2

Query: 2   VRSRMKTLKRDYIAVKELLESTEFGFSYNQQTKCIDADRQAWDAYFRAHPAARHLKGRMF 181
           V SR+K +KR Y ++K+++ ST  GFS++   K I  ++Q +D Y R HP A+ L G  F
Sbjct: 75  VDSRLKVMKRKYYSIKDMIAST--GFSWDDTRKMIQCEKQRYDEYCRDHPRAKGLYGVPF 132

Query: 182 TYFAEACVIFGNDYS 226
            YF     I+G D S
Sbjct: 133 VYFDTFDAIYGKDSS 147


>ref|XP_002301492.1| predicted protein [Populus trichocarpa] gi|222843218|gb|EEE80765.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/72 (37%), Positives = 46/72 (63%)
 Frame = +2

Query: 2   VRSRMKTLKRDYIAVKELLESTEFGFSYNQQTKCIDADRQAWDAYFRAHPAARHLKGRMF 181
           +++R KTL+  Y AVK+LLE    GFS+++  + + AD   WD Y + HP AR  + +  
Sbjct: 49  LKNRHKTLRNLYKAVKKLLEYK--GFSWDENRQMVTADNNDWDEYIKIHPDARAFRIKTI 106

Query: 182 TYFAEACVIFGN 217
            Y+++ C+I+G+
Sbjct: 107 PYYSDLCLIYGD 118


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