BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003505
         (1083 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326739.1| predicted protein [Populus trichocarpa] gi|2...   526   e-147
emb|CBI33853.3| unnamed protein product [Vitis vinifera]              507   e-141
ref|XP_002277302.1| PREDICTED: cell cycle checkpoint protein RAD...   507   e-141
ref|XP_002527664.1| rad1 DNA damage checkpoint protein, putative...   504   e-140
ref|XP_004149108.1| PREDICTED: cell cycle checkpoint protein RAD...   491   e-136

>ref|XP_002326739.1| predicted protein [Populus trichocarpa] gi|222834061|gb|EEE72538.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  526 bits (1356), Expect = e-147
 Identities = 260/304 (85%), Positives = 278/304 (91%), Gaps = 2/304 (0%)
 Frame = +2

Query: 17  MSSS--EADVADLVCQLDNVQGMVDALSSVRWKRHQDSVVELSEHGIVLIVEESGCLQAK 190
           MSSS  EAD +DLVCQLDNVQG+VDALS+VRWKRHQD+VVELSEHGIVLIVEE+GCLQAK
Sbjct: 1   MSSSAIEADTSDLVCQLDNVQGIVDALSTVRWKRHQDAVVELSEHGIVLIVEETGCLQAK 60

Query: 191 VYLKKELFVSYEYRAEGRPRFGISLGLFVDCLNTFYVPGRASTTIEISYPGPDMQLLLKS 370
           VYL+KELF+ YEY A+GRPRFG+SLGLFVDCLNTF VPG +ST IEI YPGPDMQLL+KS
Sbjct: 61  VYLQKELFIRYEYTAQGRPRFGLSLGLFVDCLNTFSVPGHSST-IEIRYPGPDMQLLIKS 119

Query: 371 VDLPDPCIYAEIRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSSIQIV 550
            D  D CIYAEIRTRIP+TISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGS IQI+
Sbjct: 120 ADSLDDCIYAEIRTRIPETISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSCIQII 179

Query: 551 MQPDPPCVTFRGEGHGDLQIDFMYYANTDLLIGFQCDHMVSYRYKYKFLRATTSNIPSSV 730
           ++P PP VTFRGEGHGDLQIDFMYYANTDLLI F CDH VSYRYKYKFLRATTSN+PSSV
Sbjct: 180 LKPVPPSVTFRGEGHGDLQIDFMYYANTDLLIAFHCDHQVSYRYKYKFLRATTSNMPSSV 239

Query: 731 IKDNRGSKLTIGRGGMLKVQHLVSVARPSNQHSYIDSAAYQQPSRIAYIEFFVKPEVDEE 910
            KDNRGSKLTIGRGGMLKVQHLVSVARPS  H +IDSA YQQPSRIAYIEFFVKPE DE+
Sbjct: 240 TKDNRGSKLTIGRGGMLKVQHLVSVARPSTSHQHIDSAGYQQPSRIAYIEFFVKPEEDED 299

Query: 911 PVND 922
            VND
Sbjct: 300 TVND 303


>emb|CBI33853.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  507 bits (1306), Expect = e-141
 Identities = 249/293 (84%), Positives = 267/293 (91%)
 Frame = +2

Query: 44  DLVCQLDNVQGMVDALSSVRWKRHQDSVVELSEHGIVLIVEESGCLQAKVYLKKELFVSY 223
           DLVCQLDNVQGMVDAL++VRWKRHQD+V+ELSEHG+VLIVEE+ CLQAKVYL++ELFV Y
Sbjct: 7   DLVCQLDNVQGMVDALTAVRWKRHQDAVMELSEHGVVLIVEETRCLQAKVYLQRELFVQY 66

Query: 224 EYRAEGRPRFGISLGLFVDCLNTFYVPGRASTTIEISYPGPDMQLLLKSVDLPDPCIYAE 403
           EY A+GRPRFG+SL LFV+CLNTF VPGR S  IEI YPGPDMQLLLKSVD  D CIYAE
Sbjct: 67  EYSAQGRPRFGVSLSLFVNCLNTFSVPGR-SNMIEIRYPGPDMQLLLKSVDSMDACIYAE 125

Query: 404 IRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSSIQIVMQPDPPCVTFR 583
           IRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSSIQI ++P PP VTFR
Sbjct: 126 IRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSSIQITLEPVPPSVTFR 185

Query: 584 GEGHGDLQIDFMYYANTDLLIGFQCDHMVSYRYKYKFLRATTSNIPSSVIKDNRGSKLTI 763
           GEGHGDLQIDFMYYANTDLLI F CDH VSYRYKYKFLRATTSNIPSSVI+DNRGSKLTI
Sbjct: 186 GEGHGDLQIDFMYYANTDLLIAFHCDHRVSYRYKYKFLRATTSNIPSSVIRDNRGSKLTI 245

Query: 764 GRGGMLKVQHLVSVARPSNQHSYIDSAAYQQPSRIAYIEFFVKPEVDEEPVND 922
           GRGGMLKVQHLVSVARPS  H ++DSA YQQPSRIAYIEFFVKPE  EE + +
Sbjct: 246 GRGGMLKVQHLVSVARPSIPHPHVDSAGYQQPSRIAYIEFFVKPEEYEEDIQN 298


>ref|XP_002277302.1| PREDICTED: cell cycle checkpoint protein RAD1-like [Vitis vinifera]
          Length = 300

 Score =  507 bits (1306), Expect = e-141
 Identities = 249/293 (84%), Positives = 267/293 (91%)
 Frame = +2

Query: 44  DLVCQLDNVQGMVDALSSVRWKRHQDSVVELSEHGIVLIVEESGCLQAKVYLKKELFVSY 223
           DLVCQLDNVQGMVDAL++VRWKRHQD+V+ELSEHG+VLIVEE+ CLQAKVYL++ELFV Y
Sbjct: 7   DLVCQLDNVQGMVDALTAVRWKRHQDAVMELSEHGVVLIVEETRCLQAKVYLQRELFVQY 66

Query: 224 EYRAEGRPRFGISLGLFVDCLNTFYVPGRASTTIEISYPGPDMQLLLKSVDLPDPCIYAE 403
           EY A+GRPRFG+SL LFV+CLNTF VPGR S  IEI YPGPDMQLLLKSVD  D CIYAE
Sbjct: 67  EYSAQGRPRFGVSLSLFVNCLNTFSVPGR-SNMIEIRYPGPDMQLLLKSVDSMDACIYAE 125

Query: 404 IRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSSIQIVMQPDPPCVTFR 583
           IRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSSIQI ++P PP VTFR
Sbjct: 126 IRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSSIQITLEPVPPSVTFR 185

Query: 584 GEGHGDLQIDFMYYANTDLLIGFQCDHMVSYRYKYKFLRATTSNIPSSVIKDNRGSKLTI 763
           GEGHGDLQIDFMYYANTDLLI F CDH VSYRYKYKFLRATTSNIPSSVI+DNRGSKLTI
Sbjct: 186 GEGHGDLQIDFMYYANTDLLIAFHCDHRVSYRYKYKFLRATTSNIPSSVIRDNRGSKLTI 245

Query: 764 GRGGMLKVQHLVSVARPSNQHSYIDSAAYQQPSRIAYIEFFVKPEVDEEPVND 922
           GRGGMLKVQHLVSVARPS  H ++DSA YQQPSRIAYIEFFVKPE  EE + +
Sbjct: 246 GRGGMLKVQHLVSVARPSIPHPHVDSAGYQQPSRIAYIEFFVKPEEYEEDIQN 298


>ref|XP_002527664.1| rad1 DNA damage checkpoint protein, putative [Ricinus communis]
           gi|223532969|gb|EEF34735.1| rad1 DNA damage checkpoint
           protein, putative [Ricinus communis]
          Length = 302

 Score =  504 bits (1299), Expect = e-140
 Identities = 249/301 (82%), Positives = 268/301 (89%)
 Frame = +2

Query: 20  SSSEADVADLVCQLDNVQGMVDALSSVRWKRHQDSVVELSEHGIVLIVEESGCLQAKVYL 199
           S+++A+  DLVCQLDNVQGMVDALS+VRWKRHQD+VVELSEHG+VLIVEE+GCLQAKVYL
Sbjct: 4   SATDAEAPDLVCQLDNVQGMVDALSAVRWKRHQDAVVELSEHGVVLIVEETGCLQAKVYL 63

Query: 200 KKELFVSYEYRAEGRPRFGISLGLFVDCLNTFYVPGRASTTIEISYPGPDMQLLLKSVDL 379
           +KELF  YEY  EGRPRFG+SLGLFVDCLNTF VPG  S  IEI YPGPD+QLL+KSVD 
Sbjct: 64  QKELFSRYEYNGEGRPRFGVSLGLFVDCLNTFSVPGHQSA-IEIQYPGPDLQLLIKSVDS 122

Query: 380 PDPCIYAEIRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSSIQIVMQP 559
            D CIYAEIRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEA DDLEWPGSSIQI + P
Sbjct: 123 IDACIYAEIRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEAFDDLEWPGSSIQITLTP 182

Query: 560 DPPCVTFRGEGHGDLQIDFMYYANTDLLIGFQCDHMVSYRYKYKFLRATTSNIPSSVIKD 739
            PP VTFRGEGHGDLQIDFMYY NTDLLI FQCD+ VSYRYKYKFLRATTSNIPSSVIKD
Sbjct: 183 VPPSVTFRGEGHGDLQIDFMYYVNTDLLIAFQCDYPVSYRYKYKFLRATTSNIPSSVIKD 242

Query: 740 NRGSKLTIGRGGMLKVQHLVSVARPSNQHSYIDSAAYQQPSRIAYIEFFVKPEVDEEPVN 919
           NRGSKLTIGRGGMLKVQHLVSV RP + H+ IDS  YQQPSRIA+IEFFV+ E DE  +N
Sbjct: 243 NRGSKLTIGRGGMLKVQHLVSVGRPFS-HAQIDSVGYQQPSRIAFIEFFVRSEEDESTIN 301

Query: 920 D 922
           D
Sbjct: 302 D 302


>ref|XP_004149108.1| PREDICTED: cell cycle checkpoint protein RAD1-like [Cucumis
           sativus] gi|449526215|ref|XP_004170109.1| PREDICTED:
           cell cycle checkpoint protein RAD1-like [Cucumis
           sativus]
          Length = 301

 Score =  491 bits (1265), Expect = e-136
 Identities = 239/298 (80%), Positives = 264/298 (88%), Gaps = 2/298 (0%)
 Frame = +2

Query: 17  MSSSEADVA--DLVCQLDNVQGMVDALSSVRWKRHQDSVVELSEHGIVLIVEESGCLQAK 190
           MSSS  D    DL+C  DNVQG+VDA +SVRWKRHQD+V+ELSEHGIVLIVEESGCLQAK
Sbjct: 1   MSSSAVDTEAPDLLCHFDNVQGLVDAFTSVRWKRHQDAVIELSEHGIVLIVEESGCLQAK 60

Query: 191 VYLKKELFVSYEYRAEGRPRFGISLGLFVDCLNTFYVPGRASTTIEISYPGPDMQLLLKS 370
           VYL++ELF+ YEY A+ RPRFG+SLG+FVD LNTF VPGR ST IE+ YPGPDMQLLLK+
Sbjct: 61  VYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLST-IELKYPGPDMQLLLKT 119

Query: 371 VDLPDPCIYAEIRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSSIQIV 550
           VD  D CIYAEIRTRIPDTISWDYNFEPAGS+PLSFTVKSAALKEAIDDLEWPGSS+ I 
Sbjct: 120 VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIA 179

Query: 551 MQPDPPCVTFRGEGHGDLQIDFMYYANTDLLIGFQCDHMVSYRYKYKFLRATTSNIPSSV 730
           +QP PP VTF+ EGHGDLQ+DFMYYANTDLLI F CD  VSYRYKYKFLRATTSNIPSSV
Sbjct: 180 LQPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDQQVSYRYKYKFLRATTSNIPSSV 239

Query: 731 IKDNRGSKLTIGRGGMLKVQHLVSVARPSNQHSYIDSAAYQQPSRIAYIEFFVKPEVD 904
           I++NRGSKLTIGRGG+LKVQHLVSV +PS  H++IDSA YQQPSRIA+IEFFVKPE D
Sbjct: 240 IRENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAGYQQPSRIAFIEFFVKPEED 297