BLASTX nr result

ID: Coptis24_contig00003500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003500
         (1338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271955.1| PREDICTED: uncharacterized membrane protein ...   401   e-109
ref|XP_002325990.1| predicted protein [Populus trichocarpa] gi|2...   399   e-109
ref|XP_002327243.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107
ref|NP_001241089.1| uncharacterized protein LOC100789661 [Glycin...   392   e-106
ref|XP_003556197.1| PREDICTED: uncharacterized membrane protein ...   391   e-106

>ref|XP_002271955.1| PREDICTED: uncharacterized membrane protein At4g09580 [Vitis
            vinifera] gi|296081147|emb|CBI18173.3| unnamed protein
            product [Vitis vinifera]
          Length = 279

 Score =  401 bits (1031), Expect = e-109
 Identities = 204/283 (72%), Positives = 231/283 (81%), Gaps = 6/283 (2%)
 Frame = -2

Query: 1208 MIGPRNIASDIXXXXNKMDEENLKED---SPKKP---KLDGGKFPLSRWELIAAITVFFV 1047
            M  PRN+ +D        DEEN  ED   + KKP   K+DG +FPL+RWE   A+ VF  
Sbjct: 1    MAAPRNLGND---GGRLRDEENANEDDSPTTKKPAGVKIDG-RFPLTRWEFTVALGVFVF 56

Query: 1046 FSTGLLSVYATMPSADYGNIKLPRSISDIRLLKDHLALYASDYPAQFILGYCSTYIFMQT 867
            FS GL  +Y TMP+A+YG I+LPR+ISD+R+LKD LA YA+DYPAQFI+GYCSTYIFMQT
Sbjct: 57   FSIGLFCIYLTMPAAEYGRIRLPRTISDLRMLKDQLATYANDYPAQFIMGYCSTYIFMQT 116

Query: 866  FMIPGTIFMSLLAGALFGVIKGLILVVLNATAGASSCYFLSKMIGRPMVSWLWPEKLKMF 687
            FMIPGTIFMSLLAGALFGV++GL LVV NATAGASSCYFLSK+IGRP+V+WLWPEKL++F
Sbjct: 117  FMIPGTIFMSLLAGALFGVVRGLFLVVFNATAGASSCYFLSKLIGRPLVNWLWPEKLRLF 176

Query: 686  HAEIGKRRDKLLNYMLFLRITPTLPNTFINLASPIVDIPFHVFFLATLVGLIPASYITVR 507
             AEI KRR+KLLNYMLFLRITPTLPN FINLASPIVDIPFHVFFLATLVGLIPASYITVR
Sbjct: 177  QAEISKRREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLVGLIPASYITVR 236

Query: 506  AGLALGDLKSVRDLYDFKTXXXXXXXXXXXXIPTFLKKKRTYE 378
            AGLALGDLKSV+DLYDFKT            +PT LK+KRTYE
Sbjct: 237  AGLALGDLKSVKDLYDFKTLSVLFLIGFISILPTLLKRKRTYE 279


>ref|XP_002325990.1| predicted protein [Populus trichocarpa] gi|222862865|gb|EEF00372.1|
            predicted protein [Populus trichocarpa]
          Length = 262

 Score =  399 bits (1025), Expect = e-109
 Identities = 195/260 (75%), Positives = 222/260 (85%), Gaps = 1/260 (0%)
 Frame = -2

Query: 1154 DEENLKED-SPKKPKLDGGKFPLSRWELIAAITVFFVFSTGLLSVYATMPSADYGNIKLP 978
            DEE  KED SP   +    +FPL+RWEL AA+ VFFVFSTGL  +Y TMP+A+YG +KLP
Sbjct: 3    DEEKAKEDDSPSAKRAKFERFPLTRWELAAALGVFFVFSTGLFCIYLTMPAAEYGKLKLP 62

Query: 977  RSISDIRLLKDHLALYASDYPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIKGL 798
            R+ISD+RLLKD+LA YA++YPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGV++G+
Sbjct: 63   RTISDLRLLKDNLATYANEYPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVVRGI 122

Query: 797  ILVVLNATAGASSCYFLSKMIGRPMVSWLWPEKLKMFHAEIGKRRDKLLNYMLFLRITPT 618
             LVV NATAGASSC+FLSK+IGRP+V+WLWPEKL+ F AEI KRRDKLLNYMLFLR+TPT
Sbjct: 123  FLVVFNATAGASSCFFLSKLIGRPLVNWLWPEKLRFFQAEIAKRRDKLLNYMLFLRVTPT 182

Query: 617  LPNTFINLASPIVDIPFHVFFLATLVGLIPASYITVRAGLALGDLKSVRDLYDFKTXXXX 438
            LPN FINLASPIVDIPFH+FFLATL+GLIPASYITVRAGLALGDLKSV+DLYD+KT    
Sbjct: 183  LPNLFINLASPIVDIPFHIFFLATLLGLIPASYITVRAGLALGDLKSVKDLYDYKTLSVL 242

Query: 437  XXXXXXXXIPTFLKKKRTYE 378
                     PT LK+KR YE
Sbjct: 243  FIIGSISIFPTLLKRKRIYE 262


>ref|XP_002327243.1| predicted protein [Populus trichocarpa] gi|222835613|gb|EEE74048.1|
            predicted protein [Populus trichocarpa]
          Length = 262

 Score =  394 bits (1013), Expect = e-107
 Identities = 192/260 (73%), Positives = 220/260 (84%), Gaps = 1/260 (0%)
 Frame = -2

Query: 1154 DEENLKED-SPKKPKLDGGKFPLSRWELIAAITVFFVFSTGLLSVYATMPSADYGNIKLP 978
            DEE  KED SP   +    +FPL+RWEL AA+ VF VFSTGL  +Y TMP+ADYG +KLP
Sbjct: 3    DEEKAKEDDSPSAKRSKFERFPLTRWELAAALGVFLVFSTGLFCIYLTMPAADYGKLKLP 62

Query: 977  RSISDIRLLKDHLALYASDYPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIKGL 798
            RSISD+RLLKD+LA Y S+YPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFG+++GL
Sbjct: 63   RSISDLRLLKDNLATYVSEYPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGIVRGL 122

Query: 797  ILVVLNATAGASSCYFLSKMIGRPMVSWLWPEKLKMFHAEIGKRRDKLLNYMLFLRITPT 618
             LVV NATAGASSC+FLSK+IGRP+V+WLWPEK++ F +EI KR++KLLNYMLFLR+TPT
Sbjct: 123  FLVVFNATAGASSCFFLSKLIGRPLVNWLWPEKMRFFQSEIAKRKEKLLNYMLFLRVTPT 182

Query: 617  LPNTFINLASPIVDIPFHVFFLATLVGLIPASYITVRAGLALGDLKSVRDLYDFKTXXXX 438
            LPN FINLASPIVDIPFH+FFLATL+GLIPASYITV+AGLALGDLKSV+DLYDFKT    
Sbjct: 183  LPNLFINLASPIVDIPFHIFFLATLLGLIPASYITVKAGLALGDLKSVKDLYDFKTLSVL 242

Query: 437  XXXXXXXXIPTFLKKKRTYE 378
                     PT LK+KR YE
Sbjct: 243  FLIGSISIFPTLLKRKRIYE 262


>ref|NP_001241089.1| uncharacterized protein LOC100789661 [Glycine max]
            gi|255639798|gb|ACU20192.1| unknown [Glycine max]
          Length = 271

 Score =  392 bits (1006), Expect = e-106
 Identities = 189/277 (68%), Positives = 225/277 (81%)
 Frame = -2

Query: 1208 MIGPRNIASDIXXXXNKMDEENLKEDSPKKPKLDGGKFPLSRWELIAAITVFFVFSTGLL 1029
            M  PRN+ +       + +E+  ++DSP   K    +FPL+ WE   A+ VFFVFSTGL 
Sbjct: 1    MAAPRNVTAT------RDEEKGEEDDSPSAKKPKSERFPLNTWEFAVAVAVFFVFSTGLF 54

Query: 1028 SVYATMPSADYGNIKLPRSISDIRLLKDHLALYASDYPAQFILGYCSTYIFMQTFMIPGT 849
             VY ++PSA Y N+KLPR++SD+RLLK+HL+ YAS++PAQFILGYCSTYIFMQTFMIPGT
Sbjct: 55   CVYLSLPSAAYTNLKLPRTLSDLRLLKEHLSAYASNHPAQFILGYCSTYIFMQTFMIPGT 114

Query: 848  IFMSLLAGALFGVIKGLILVVLNATAGASSCYFLSKMIGRPMVSWLWPEKLKMFHAEIGK 669
            IFMSLLAGALFGV++G++LVV NATAGASSC+FLSK+IGRP+VSWLWPEKL+ F AEI K
Sbjct: 115  IFMSLLAGALFGVVRGILLVVFNATAGASSCFFLSKLIGRPLVSWLWPEKLRFFQAEIAK 174

Query: 668  RRDKLLNYMLFLRITPTLPNTFINLASPIVDIPFHVFFLATLVGLIPASYITVRAGLALG 489
            RRD+LLNYMLFLRITPTLPN FINLASPIVD+PFH+FF ATL+GL+PASYITVRAGLALG
Sbjct: 175  RRDRLLNYMLFLRITPTLPNLFINLASPIVDVPFHIFFSATLIGLVPASYITVRAGLALG 234

Query: 488  DLKSVRDLYDFKTXXXXXXXXXXXXIPTFLKKKRTYE 378
            DLKS++DLYDFKT             PT LK+KR YE
Sbjct: 235  DLKSIKDLYDFKTLSVLFLIGFVSIAPTLLKRKRVYE 271


>ref|XP_003556197.1| PREDICTED: uncharacterized membrane protein At4g09580-like [Glycine
            max]
          Length = 271

 Score =  391 bits (1004), Expect = e-106
 Identities = 189/277 (68%), Positives = 223/277 (80%)
 Frame = -2

Query: 1208 MIGPRNIASDIXXXXNKMDEENLKEDSPKKPKLDGGKFPLSRWELIAAITVFFVFSTGLL 1029
            M  PRN+ +       + +E+   +DSP   K    +FPL+ WE   A+ VF VFSTGL 
Sbjct: 1    MAAPRNVTAT------RDEEKGEDDDSPSAKKPKSERFPLNTWEFAVAVAVFLVFSTGLF 54

Query: 1028 SVYATMPSADYGNIKLPRSISDIRLLKDHLALYASDYPAQFILGYCSTYIFMQTFMIPGT 849
             +Y TMPSA Y N+KLPR++SD+RLLK+HL+ YAS++PAQFILGYCSTYIFMQTFMIPGT
Sbjct: 55   CIYLTMPSAAYTNLKLPRTLSDLRLLKEHLSTYASNHPAQFILGYCSTYIFMQTFMIPGT 114

Query: 848  IFMSLLAGALFGVIKGLILVVLNATAGASSCYFLSKMIGRPMVSWLWPEKLKMFHAEIGK 669
            IFMSLLAGALFGV++G++LVV NATAGASSC+FLSK+IGRP+VSWLWPEKL+ F AEI K
Sbjct: 115  IFMSLLAGALFGVVRGILLVVFNATAGASSCFFLSKLIGRPLVSWLWPEKLRFFQAEIAK 174

Query: 668  RRDKLLNYMLFLRITPTLPNTFINLASPIVDIPFHVFFLATLVGLIPASYITVRAGLALG 489
            RRD+LLNYMLFLRITPTLPN FINLASPIVD+PFH+FF ATL+GL+PASYITVRAGLALG
Sbjct: 175  RRDRLLNYMLFLRITPTLPNLFINLASPIVDVPFHIFFSATLIGLVPASYITVRAGLALG 234

Query: 488  DLKSVRDLYDFKTXXXXXXXXXXXXIPTFLKKKRTYE 378
            DLKS++DLYDFKT             PT LK+KR YE
Sbjct: 235  DLKSIKDLYDFKTLSVLFLIGFVSIAPTLLKRKRVYE 271


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