BLASTX nr result

ID: Coptis24_contig00003499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003499
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136629.1| PREDICTED: uncharacterized protein LOC101216...    60   2e-07
gb|AFK42112.1| unknown [Medicago truncatula]                           60   2e-07
ref|XP_003622485.1| NF-kappa-B-activating protein [Medicago trun...    60   2e-07
emb|CBI28704.3| unnamed protein product [Vitis vinifera]               58   9e-07
ref|XP_003632332.1| PREDICTED: uncharacterized protein LOC100853...    58   9e-07

>ref|XP_004136629.1| PREDICTED: uncharacterized protein LOC101216782 [Cucumis sativus]
           gi|449517926|ref|XP_004165995.1| PREDICTED:
           uncharacterized protein LOC101231705 [Cucumis sativus]
          Length = 531

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/43 (62%), Positives = 36/43 (83%)
 Frame = +2

Query: 2   ELKGLSYEEYRTTKRIKLRKNIRNCIYRITPSPPRSEWDLQEE 130
           ELKGL+YEEYR  KR KLRK++++CI+R+TPSPPR+  +  EE
Sbjct: 106 ELKGLNYEEYRRLKRQKLRKSLKHCIWRVTPSPPRNGNEEYEE 148


>gb|AFK42112.1| unknown [Medicago truncatula]
          Length = 486

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = +2

Query: 2   ELKGLSYEEYRTTKRIKLRKNIRNCIYRITPSPPRSEWDLQEE 130
           ELKGLSYEEYR  KR K+RK++++CI+ +TPSPPR E D  E+
Sbjct: 105 ELKGLSYEEYRRLKRQKMRKSLKHCIWNVTPSPPRRENDDLED 147


>ref|XP_003622485.1| NF-kappa-B-activating protein [Medicago truncatula]
           gi|355497500|gb|AES78703.1| NF-kappa-B-activating
           protein [Medicago truncatula]
          Length = 488

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = +2

Query: 2   ELKGLSYEEYRTTKRIKLRKNIRNCIYRITPSPPRSEWDLQEE 130
           ELKGLSYEEYR  KR K+RK++++CI+ +TPSPPR E D  E+
Sbjct: 105 ELKGLSYEEYRRLKRQKMRKSLKHCIWNVTPSPPRRENDDLED 147


>emb|CBI28704.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = +2

Query: 2   ELKGLSYEEYRTTKRIKLRKNIRNCIYRITPSPPRS 109
           ELKGLS+EEYR  KR KLR+ +RNCI+ +TPSPPR+
Sbjct: 104 ELKGLSFEEYRRLKRQKLRRMLRNCIWNVTPSPPRN 139


>ref|XP_003632332.1| PREDICTED: uncharacterized protein LOC100853496 [Vitis vinifera]
          Length = 540

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = +2

Query: 2   ELKGLSYEEYRTTKRIKLRKNIRNCIYRITPSPPRS 109
           ELKGLS+EEYR  KR KLR+ +RNCI+ +TPSPPR+
Sbjct: 104 ELKGLSFEEYRRLKRQKLRRMLRNCIWNVTPSPPRN 139


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