BLASTX nr result

ID: Coptis24_contig00003496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003496
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272922.1| PREDICTED: uncharacterized protein LOC100265...   175   9e-42
ref|XP_002522585.1| conserved hypothetical protein [Ricinus comm...   174   2e-41
ref|XP_002316823.1| predicted protein [Populus trichocarpa] gi|2...   170   3e-40
ref|XP_003546030.1| PREDICTED: uncharacterized protein LOC100775...   169   6e-40
ref|XP_003542998.1| PREDICTED: uncharacterized protein LOC100778...   165   1e-38

>ref|XP_002272922.1| PREDICTED: uncharacterized protein LOC100265230 [Vitis vinifera]
          Length = 182

 Score =  175 bits (444), Expect = 9e-42
 Identities = 99/174 (56%), Positives = 117/174 (67%), Gaps = 14/174 (8%)
 Frame = -2

Query: 683 MKNSIKCCISCILPCGILDVIRIVHSNGRVEELSHTVQASEILKANPKHVLRKASS---D 513
           MKN+I+CCISCILPCG LDV+RIVHSNG VEE+S T+ ASEI+KA+PKHVL+K SS   +
Sbjct: 10  MKNTIRCCISCILPCGALDVVRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSSSEE 69

Query: 512 GVVPKIVMVPPEAELQRGKIYFLMPVSSQPQXXXXXXXXXXXXXXXXXXXGSS------- 354
           GVVPKIV+VPP+AELQRGKIYFLMP+   P+                    ++       
Sbjct: 70  GVVPKIVVVPPDAELQRGKIYFLMPIPPPPEKTRSRSSTRKKRRDSESNNTNTHHHHSNT 129

Query: 353 ----VDMTTRLLISDQYLTEILSEKISTQXXXXXXXXXXXRPHLESISETQSDL 204
               + MT  LLISD+YL+EILSEKISTQ           RPHLESISET SDL
Sbjct: 130 ANNTISMTN-LLISDRYLSEILSEKISTQRDRRRGRVGVWRPHLESISETPSDL 182


>ref|XP_002522585.1| conserved hypothetical protein [Ricinus communis]
           gi|223538276|gb|EEF39885.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 197

 Score =  174 bits (441), Expect = 2e-41
 Identities = 101/194 (52%), Positives = 118/194 (60%), Gaps = 35/194 (18%)
 Frame = -2

Query: 683 MKNSIKCCISCILPCGILDVIRIVHSNGRVEELSHTVQASEILKANPKHVLRKASS---- 516
           +KN+I+CCISCI PCG LDVIRIVHSNGRVEE+S T++ASEI+KA PKHVL+K SS    
Sbjct: 3   LKNTIRCCISCIFPCGALDVIRIVHSNGRVEEISGTIRASEIMKAYPKHVLKKPSSSPSD 62

Query: 515 DGVVPKIVMVPPEAELQRGKIYFLMPVSSQP----------------------------- 423
           DGVVPKIV+VPP+AELQRGKIYFLMP+ S P                             
Sbjct: 63  DGVVPKIVVVPPDAELQRGKIYFLMPMPSTPPEKQIKTKTKSKTTTATTMTTHRSRTSSH 122

Query: 422 --QXXXXXXXXXXXXXXXXXXXGSSVDMTTRLLISDQYLTEILSEKISTQXXXXXXXXXX 249
             +                    +S+ MTT LLISD+YL+EILSEKISTQ          
Sbjct: 123 SRRKRRENYSHESNSNLDSSNVSNSISMTTNLLISDRYLSEILSEKISTQRDRRRGRVGV 182

Query: 248 XRPHLESISETQSD 207
            RPHLESISET +D
Sbjct: 183 WRPHLESISETSND 196


>ref|XP_002316823.1| predicted protein [Populus trichocarpa] gi|222859888|gb|EEE97435.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  170 bits (431), Expect = 3e-40
 Identities = 98/174 (56%), Positives = 114/174 (65%), Gaps = 19/174 (10%)
 Frame = -2

Query: 683 MKNSIKCCISCILPCGILDVIRIVHSNGRVEELSHTVQASEILKANPKHVLRKASS---D 513
           MKN+I+CCISCILPCG LDVIRIVHSNGRVEE+S T++ASEI+KA PKH+L+K SS   D
Sbjct: 1   MKNTIRCCISCILPCGALDVIRIVHSNGRVEEISGTIRASEIMKAYPKHILKKPSSPSDD 60

Query: 512 GVVPKIVMVPPEAELQRGKIYFLMPV-------SSQPQXXXXXXXXXXXXXXXXXXXGS- 357
           G VPKIV+VPP+AELQRGKIYFLMP        SS+                      S 
Sbjct: 61  GFVPKIVIVPPDAELQRGKIYFLMPAPPTQETKSSRSSKGSGMRKKRREISINNRSTESN 120

Query: 356 --------SVDMTTRLLISDQYLTEILSEKISTQXXXXXXXXXXXRPHLESISE 219
                   S+ +TT LLISDQYL+EILSEK+STQ           RPHLESI+E
Sbjct: 121 NSSHIVTNSISLTTNLLISDQYLSEILSEKLSTQRDRRRGRAGVWRPHLESITE 174


>ref|XP_003546030.1| PREDICTED: uncharacterized protein LOC100775708 [Glycine max]
          Length = 176

 Score =  169 bits (428), Expect = 6e-40
 Identities = 93/172 (54%), Positives = 114/172 (66%), Gaps = 14/172 (8%)
 Frame = -2

Query: 683 MKNSIKCCISCILPCGILDVIRIVHSNGRVEELSHTVQASEILKANPKHVLRKASS---- 516
           M+NSI+CCISCILPCG LDVIRIVHSNGRVEE+S T++AS+++KA+PKHVL+K SS    
Sbjct: 1   MRNSIRCCISCILPCGALDVIRIVHSNGRVEEISGTIKASDVMKAHPKHVLKKPSSPSTQ 60

Query: 515 DGVVPKIVMVPPEAELQRGKIYFLMPVSSQPQXXXXXXXXXXXXXXXXXXXGSS------ 354
           DGVVPKIV+VPP+AELQRGKIYFLMP+ S P                      S      
Sbjct: 61  DGVVPKIVVVPPDAELQRGKIYFLMPLPSPPSEKNNHLQRSSSSGKKKRKEHHSDNRNIN 120

Query: 353 ----VDMTTRLLISDQYLTEILSEKISTQXXXXXXXXXXXRPHLESISETQS 210
               + +   L+ +++YLTEILSEK+STQ           RPHLESISE+ S
Sbjct: 121 NNNAISVANLLVSNERYLTEILSEKVSTQRDRRRGRVAVWRPHLESISESPS 172


>ref|XP_003542998.1| PREDICTED: uncharacterized protein LOC100778347 [Glycine max]
          Length = 195

 Score =  165 bits (417), Expect = 1e-38
 Identities = 92/178 (51%), Positives = 115/178 (64%), Gaps = 18/178 (10%)
 Frame = -2

Query: 689 EIMKNSIKCCISCILPCGILDVIRIVHSNGRVEELSHTVQASEILKANPKHVLRKASS-- 516
           E M+NSI+CCISCILPCG LDVIRIVHSNGRVEE+S T++ASEI+KA+PKHVL+K SS  
Sbjct: 13  EGMRNSIRCCISCILPCGALDVIRIVHSNGRVEEISGTIKASEIMKAHPKHVLKKPSSPS 72

Query: 515 --DGVVPKIVMVPPEAELQRGKIYFLMPVSSQP--------------QXXXXXXXXXXXX 384
             DGVVPKIV+VPP+A+LQRGKIYFLMP+ S P              +            
Sbjct: 73  TQDGVVPKIVVVPPDADLQRGKIYFLMPLPSPPSEKNSSHRQRSSSGKKKRKEHHNDNRN 132

Query: 383 XXXXXXXGSSVDMTTRLLISDQYLTEILSEKISTQXXXXXXXXXXXRPHLESISETQS 210
                   ++  +   L  +++YLTE+LS+K+STQ           RPHLESISE+ S
Sbjct: 133 NNNNNNNNNATSVANLLASNERYLTEVLSDKVSTQRDRTRGRVAVWRPHLESISESPS 190


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