BLASTX nr result

ID: Coptis24_contig00003489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003489
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283288.1| PREDICTED: uncharacterized protein LOC100256...   179   4e-43
ref|XP_002517076.1| ice binding protein, putative [Ricinus commu...   171   7e-41
ref|XP_003556066.1| PREDICTED: uncharacterized protein LOC100814...   171   9e-41
ref|XP_002315753.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40
ref|XP_002311638.1| predicted protein [Populus trichocarpa] gi|2...   169   5e-40

>ref|XP_002283288.1| PREDICTED: uncharacterized protein LOC100256307 [Vitis vinifera]
          Length = 461

 Score =  179 bits (453), Expect = 4e-43
 Identities = 103/166 (62%), Positives = 117/166 (70%), Gaps = 4/166 (2%)
 Frame = -2

Query: 505 DIATADSWRPESVHITG-FRPPETPREPMEFLSRSWSASAFEVSKALTTTNNPHLMRSST 329
           D    D W+ +    TG FRPPETPREPMEFLSRSWS SA EVSKAL  T     M++ +
Sbjct: 2   DKTVGDPWKSD----TGLFRPPETPREPMEFLSRSWSVSALEVSKALAPTQ----MQALS 53

Query: 328 PPLSGCGTPVILEDIXXXXXXXXXALVSGNPFSFASSATSQLVMERILSQSQDVSPRTSG 149
             LSG G   I EDI           +SGNPFSFASS TSQLVMERI+SQSQ+VSPRTSG
Sbjct: 54  KTLSGGGGFAIPEDIAGEVEEAA---ISGNPFSFASSETSQLVMERIMSQSQEVSPRTSG 110

Query: 148 RLSHSSGPLT---AGGSLTDSPPISPNEMDDMKFCRMTNSVASQYR 20
           RLSHSSGPL    + GSLTDSPP+SP+E+DD+KFCR  N V +QYR
Sbjct: 111 RLSHSSGPLNGTQSCGSLTDSPPVSPSEIDDLKFCRSNNPVNTQYR 156


>ref|XP_002517076.1| ice binding protein, putative [Ricinus communis]
           gi|223543711|gb|EEF45239.1| ice binding protein,
           putative [Ricinus communis]
          Length = 477

 Score =  171 bits (434), Expect = 7e-41
 Identities = 103/191 (53%), Positives = 124/191 (64%), Gaps = 23/191 (12%)
 Frame = -2

Query: 505 DIATADSWRPESVHITGFRPPETPREPMEFLSRSWSASAFEVSKALTTTNNPHLMRSSTP 326
           D    + WRP+   +  FRPPETPREPMEFLSRSWS SA EVSKAL     P ++ S T 
Sbjct: 2   DKPITEPWRPD---LALFRPPETPREPMEFLSRSWSVSALEVSKALAP---PQMLLSKTS 55

Query: 325 PLSGCGTPVILEDIXXXXXXXXXA----------LVSGNPFSFASSATSQLVMERILSQS 176
             +GC   VI EDI         +           VSGNPFSFASS TSQ+VMERI+SQS
Sbjct: 56  --AGC---VIQEDIAGELEEINISNNINNNNNNATVSGNPFSFASSETSQMVMERIMSQS 110

Query: 175 QDVSPRTSGRLSHSSGPLTAGGSLTDSPPISPNEMDDMKFCRMTNSVASQYR-------- 20
           Q+VSPRTSGRLSHSSGPL   GSLTDSPP+SP+E+DD+K+ R  N++++Q+R        
Sbjct: 111 QEVSPRTSGRLSHSSGPL--NGSLTDSPPVSPSEIDDVKYSRPNNAISTQFRTPSATPGV 168

Query: 19  -----SGGGGG 2
                +GGGGG
Sbjct: 169 ASGFTAGGGGG 179


>ref|XP_003556066.1| PREDICTED: uncharacterized protein LOC100814874 [Glycine max]
          Length = 476

 Score =  171 bits (433), Expect = 9e-41
 Identities = 98/162 (60%), Positives = 116/162 (71%), Gaps = 3/162 (1%)
 Frame = -2

Query: 505 DIATADSWRPESVHITGFRPPETPREPMEFLSRSWSASAFEVSKALTTTNNPHLMRSSTP 326
           D A  + WRP+ +H   FRPPETPREPMEFLSRSWS SA EVSKAL+    P L + +  
Sbjct: 2   DKAQTEPWRPDPLHSGMFRPPETPREPMEFLSRSWSVSALEVSKALS----PALSKVTLS 57

Query: 325 PLSGCGTPVILEDIXXXXXXXXXALVSGNPFSFASSATSQLVMERILSQSQDVSPRTSGR 146
             +G     I EDI           VSGNPFSFASS TSQ+VMERI+SQSQ+VSPRTSGR
Sbjct: 58  --NGAAVVAIPEDIAGEAEEASAT-VSGNPFSFASSETSQMVMERIMSQSQEVSPRTSGR 114

Query: 145 LSHSSGPLT---AGGSLTDSPPISPNEMDDMKFCRMTNSVAS 29
           LSHSSGPL    + GSLTDSPP+SP+E+DD+K+ R TN++AS
Sbjct: 115 LSHSSGPLNGTQSCGSLTDSPPVSPSEIDDIKYTR-TNNIAS 155


>ref|XP_002315753.1| predicted protein [Populus trichocarpa] gi|222864793|gb|EEF01924.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  170 bits (431), Expect = 2e-40
 Identities = 102/188 (54%), Positives = 122/188 (64%), Gaps = 20/188 (10%)
 Frame = -2

Query: 505 DIATADSWRPESVHITGFRPPETPREPMEFLSRSWSASAFEVSKALTTTNNPHLMRSSTP 326
           D   A++WRPE  H   FRPPETPREPMEFLSRSWS SA EVSKAL     P ++ SS  
Sbjct: 2   DKPIAETWRPEPAH---FRPPETPREPMEFLSRSWSLSALEVSKALAP---PQMVFSSKT 55

Query: 325 PLSGCGTPVILEDIXXXXXXXXXALVSGNPFSFASSATSQLVMERILSQSQDVSPRTSGR 146
             + CG   ++++          A VSGNPFSFASS TSQ+V+ERI+SQSQ+VSPRTSGR
Sbjct: 56  --NPCGAGGMIQEDIIGELEESGATVSGNPFSFASSETSQMVLERIMSQSQEVSPRTSGR 113

Query: 145 LSHSSGPLTAGGSLTDSPPISPNEMDDMK-----FCRMTNSVASQYR------------- 20
           LSHSSGPL   GSLTDSPP+SP+EMDD+K     + R  N   +Q+R             
Sbjct: 114 LSHSSGPL--NGSLTDSPPVSPSEMDDVKVIFLRYSRSNNPHNTQFRAPAVTPGGNAITA 171

Query: 19  --SGGGGG 2
             +GGGGG
Sbjct: 172 AATGGGGG 179


>ref|XP_002311638.1| predicted protein [Populus trichocarpa] gi|222851458|gb|EEE89005.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  169 bits (427), Expect = 5e-40
 Identities = 98/162 (60%), Positives = 111/162 (68%)
 Frame = -2

Query: 505 DIATADSWRPESVHITGFRPPETPREPMEFLSRSWSASAFEVSKALTTTNNPHLMRSSTP 326
           D    + WRP+ V    FRPPETPREPMEFLSRSWS SA EVSK L     P ++ SS  
Sbjct: 2   DKPVTEIWRPDPVL---FRPPETPREPMEFLSRSWSVSALEVSKVLA----PQMVFSSKA 54

Query: 325 PLSGCGTPVILEDIXXXXXXXXXALVSGNPFSFASSATSQLVMERILSQSQDVSPRTSGR 146
              G G  +I EDI           VSGNPFSFASS TSQ+V+ERI+SQSQ+ SPRTSGR
Sbjct: 55  IPCGAGG-MIQEDIIGELEEGCAT-VSGNPFSFASSETSQMVLERIMSQSQEASPRTSGR 112

Query: 145 LSHSSGPLTAGGSLTDSPPISPNEMDDMKFCRMTNSVASQYR 20
           LSHSSGPL   GSLTDSPP+SP+EMDD+KFCR  N    Q+R
Sbjct: 113 LSHSSGPL--NGSLTDSPPVSPSEMDDVKFCRPNNPPNVQFR 152


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