BLASTX nr result
ID: Coptis24_contig00003481
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003481
(1068 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI18893.3| unnamed protein product [Vitis vinifera] 282 9e-74
ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synth... 278 2e-72
ref|XP_002510624.1| conserved hypothetical protein [Ricinus comm... 258 2e-66
ref|XP_002307763.1| predicted protein [Populus trichocarpa] gi|2... 235 1e-59
emb|CAH67165.1| H0211B05.2 [Oryza sativa Indica Group] gi|218195... 228 3e-57
>emb|CBI18893.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 282 bits (722), Expect = 9e-74
Identities = 162/349 (46%), Positives = 209/349 (59%), Gaps = 16/349 (4%)
Frame = -1
Query: 999 DEEAQIIEHAVRSLPSHAAAIDLLSSGVCVRCILRLFGVSGRVXXXXXXXXXXXXXXXXX 820
+++ +I+ AV + HA DLLS G+C+ CI RL GV G +
Sbjct: 64 EDDMRILNDAVSKVSPHAVK-DLLSLGICIGCIFRLSGVRGHIFSCPSLLLSILHPVIDS 122
Query: 819 XXXSHDYSDTWRPSIEAESLYYCSVCLGILQFCHTDGKV----KDQVSEFTLSISEMVKK 652
P I CS+CLG+LQF + D K KD E +SI+ +VKK
Sbjct: 123 GAAHSSQESECEPVI-------CSICLGVLQFTYFDDKKMLVKKDSADELAVSIANLVKK 175
Query: 651 EGHEIESFCFEISVPPIISANENAIWLCMKNKYGSELWCQEEKLLAEHVSLKDALKMSVT 472
EGHE ++F E+S+PP+I+ NE+ + L MK KYGSELW QE K L+E +S KDALK+S+
Sbjct: 176 EGHEFDNFSLEVSIPPVIAENEHVVLLYMKKKYGSELWFQE-KFLSERISAKDALKLSLC 234
Query: 471 DSLETLLAGKYALGS-FHICLTYTQTKASSWLLGCQDRNQDFKRRKTETVDS-------- 319
+ LE LL K + S F I LTY Q +AS +R+Q KRR+T T +
Sbjct: 235 NPLEKLLDVKSSGSSTFRIRLTYAQPRASGKNQNITERSQGCKRRRTGTENIFSTVHGSV 294
Query: 318 VQGLECSEDASGEVGSAMDTSLNGLQDSES---FNSAPEKVKEPCCLTCHCYRTPIYVGG 148
V G+ECS+ ++ E + + +GLQD+E+ F EKV +PC L CYRT IY+GG
Sbjct: 295 VDGIECSDISTSEADAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAFLCYRTHIYIGG 354
Query: 147 RYLKYSRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAG 1
RYLKYSRNVSQTRWIIDDERMGEASVEEIIG I+P+C GD YKFHAAG
Sbjct: 355 RYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAG 403
>ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Vitis
vinifera]
Length = 578
Score = 278 bits (711), Expect = 2e-72
Identities = 167/360 (46%), Positives = 215/360 (59%), Gaps = 27/360 (7%)
Frame = -1
Query: 999 DEEAQIIEHAVRSLPSHAAAIDLLSSGVCVRCILRLFGVSGRVXXXXXXXXXXXXXXXXX 820
+++ +I+ AV + HA DLLS G+C+ CI RL GV G +
Sbjct: 33 EDDMRILNDAVSKVSPHAVK-DLLSLGICIGCIFRLSGVRGHIFSCPSLLLSILHPVIGE 91
Query: 819 XXXS--HDY--------SDTWRPSIEAE-SLYYCSVCLGILQFCHTDGKV----KDQVSE 685
S H Y S S E+E CS+CLG+LQF + D K KD E
Sbjct: 92 PTDSSTHRYTGIGGNEDSGAAHSSQESECEPVICSICLGVLQFTYFDDKKMLVKKDSADE 151
Query: 684 FTLSISEMVKKEGHEIESFCFEISVPPIISANENAIWLCMKNKYGSELWCQEEKLLAEHV 505
+SI+ +VKKEGHE ++F E+S+PP+I+ NE+ + L MK KYGSELW QE K L+E +
Sbjct: 152 LAVSIANLVKKEGHEFDNFSLEVSIPPVIAENEHVVLLYMKKKYGSELWFQE-KFLSERI 210
Query: 504 SLKDALKMSVTDSLETLLAGKYALGS-FHICLTYTQTKASSWLLGCQDRNQDFKRRKTET 328
S KDALK+S+ + LE LL K + S F I LTY Q +AS +R+Q KRR+T T
Sbjct: 211 SAKDALKLSLCNPLEKLLDVKSSGSSTFRIRLTYAQPRASGKNQNITERSQGCKRRRTGT 270
Query: 327 VDS--------VQGLECSEDASGEVGSAMDTSLNGLQDSES---FNSAPEKVKEPCCLTC 181
+ V G+ECS+ ++ E + + +GLQD+E+ F EKV +PC L
Sbjct: 271 ENIFSTVHGSVVDGIECSDISTSEADAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAF 330
Query: 180 HCYRTPIYVGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAG 1
CYRT IY+GGRYLKYSRNVSQTRWIIDDERMGEASVEEIIG I+P+C GD YKFHAAG
Sbjct: 331 LCYRTHIYIGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAG 390
>ref|XP_002510624.1| conserved hypothetical protein [Ricinus communis]
gi|223551325|gb|EEF52811.1| conserved hypothetical
protein [Ricinus communis]
Length = 565
Score = 258 bits (658), Expect = 2e-66
Identities = 156/351 (44%), Positives = 200/351 (56%), Gaps = 18/351 (5%)
Frame = -1
Query: 999 DEEAQIIEHAVRSLPSHAAAIDLLSSGVCVRCILRLFGVSGRVXXXXXXXXXXXXXXXXX 820
DE+ ++ AVRSLPSHA LL +G+C+RCI RL GV G +
Sbjct: 32 DEDMRLFNEAVRSLPSHAVK-GLLRNGICMRCIFRLLGVQGHI--FFTYPLSRSLMHNIL 88
Query: 819 XXXSHDYSDTWRPSIEAES---LYYCSVCLGILQFCHTDGK----VKDQVSEFTLSISEM 661
D D S ES C+VCLGILQF H D K K +SI+E+
Sbjct: 89 GESWKDDEDMKGCSTYNESGVDQEICNVCLGILQFIHRDDKGVLVKKHNAVNLCVSIAEL 148
Query: 660 VKKEGHEIESFCFEISVPPIISANENAIWLCMKNKYGSELWCQEEKLLAEHVSLKDALKM 481
+K+EGH+I+SF E+S+ PII NE I L M+ KY SELW QE +++ + K+ALK
Sbjct: 149 IKQEGHQIDSFSLEVSIAPIIQENERVIRLYMERKYRSELWFQES--VSKCICTKEALKF 206
Query: 480 SVTDSLETLLAGKYALGSFHICLTYTQTKASSWLLGCQDRNQDFKRRKTETVDSVQGLE- 304
++ + LE +L K S I LTYTQ K S + KRRKT D+ + +
Sbjct: 207 AIANPLERMLDVKSGPSSCRIRLTYTQAKPSGIAPNSVPGGEGCKRRKTGITDAPESVNN 266
Query: 303 --------CSEDASGEVGSAMDTSLNGLQDSESFNS--APEKVKEPCCLTCHCYRTPIYV 154
C + + + + ++S GL++ ES EKVKEPC L CYRTPIY
Sbjct: 267 ELINARNGCFDSSMYKGIDSSESSFCGLENHESSECIFPKEKVKEPCNLLFLCYRTPIYF 326
Query: 153 GGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAG 1
GGRYLK+SRNVSQTRWIIDDERMGEAS+EEIIG +I P+C+GD YKFHAAG
Sbjct: 327 GGRYLKFSRNVSQTRWIIDDERMGEASIEEIIGGSIFPMCQGDSYKFHAAG 377
>ref|XP_002307763.1| predicted protein [Populus trichocarpa] gi|222857212|gb|EEE94759.1|
predicted protein [Populus trichocarpa]
Length = 520
Score = 235 bits (600), Expect = 1e-59
Identities = 150/342 (43%), Positives = 188/342 (54%), Gaps = 9/342 (2%)
Frame = -1
Query: 999 DEEAQIIEHAVRSLPSHAAAIDLLSSGVCVRCILRLFGVSGRVXXXXXXXXXXXXXXXXX 820
D+E + + AVRSLPSHA DLLS+G
Sbjct: 32 DDERRHLNDAVRSLPSHAVK-DLLSAG--------------------------------- 57
Query: 819 XXXSHDYSDTWRPSIEAESLYYCSVCLGILQFCHTDGKV----KDQVSEFTLSISEMVKK 652
S++ ++ E C +CLGILQF + D K + E SI+E+ ++
Sbjct: 58 --GDSSSSESMESELKPE---VCRICLGILQFIYRDEKEMLVKRKNGDELAASIAELTRQ 112
Query: 651 EGHEIESFCFEISVPPIISANENAIWLCMKNKYGSELWCQEEKLLAEHVSLKDALKMSVT 472
EGH+I+ F E+S+PPII NE A+ L MK KYGSELW QE L+E +S KDALK ++
Sbjct: 113 EGHQIDGFSLEVSIPPIIFENEQAVRLYMKKKYGSELWFQER--LSECISTKDALKFAIV 170
Query: 471 DSLETLLAGKYALGSFHICLTYTQTKASSWLLGCQDRNQDFKRR-KTETVDSV-QGLECS 298
+ LE +L K I LTYT+TK S DRN T V+ V G C
Sbjct: 171 NPLEIILDVKSGPSYVRIRLTYTETKPSIIPSKSVDRNGGTNNGLDTVHVELVGNGTGCC 230
Query: 297 EDASGEVGSAMDTSLNGL---QDSESFNSAPEKVKEPCCLTCHCYRTPIYVGGRYLKYSR 127
+ + G+ A S GL + SE N E+V EPC L CYRTPIY GGRYLK+SR
Sbjct: 231 DLSLGQGSPASGRSSTGLAEHESSECSNFPLERVNEPCHLVFLCYRTPIYFGGRYLKFSR 290
Query: 126 NVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAG 1
NVSQTRWIIDDERMGEAS+EEIIG I+P+C+GD YKFHAAG
Sbjct: 291 NVSQTRWIIDDERMGEASIEEIIGGNILPMCQGDSYKFHAAG 332
>emb|CAH67165.1| H0211B05.2 [Oryza sativa Indica Group] gi|218195372|gb|EEC77799.1|
hypothetical protein OsI_16978 [Oryza sativa Indica
Group]
Length = 536
Score = 228 bits (580), Expect = 3e-57
Identities = 142/345 (41%), Positives = 190/345 (55%), Gaps = 13/345 (3%)
Frame = -1
Query: 996 EEAQIIEHAVRS-LPSHAAAIDLLSSGVCVRCILRLFGVSGRVXXXXXXXXXXXXXXXXX 820
E I+E A S P A LLS GVCVRCI R FG
Sbjct: 10 EARSILERAAASSFPPLHAIHHLLSVGVCVRCIFRFFGAFSYAAPCLSLTASVLHSFLEE 69
Query: 819 XXXSHDYSDTWRPSIEAESLYYCSVCLGIL-QFCHTDGKVK-----DQVSEFTLSISEMV 658
D++ + S ++ YCS+C G+L C+ D V+ + T ISE V
Sbjct: 70 HD---DFAKSGSCSCLSKDEAYCSICFGVLLPTCYQDDGVEPLRSVSPIDNVTSIISEAV 126
Query: 657 KKEGHEIESFCFEISVPPIISANENAIWLCMKNKYGSELWCQEEKLLAEHVSLKDALKMS 478
++EGH+++ F EIS+P +I+AN+ AI L MK KYGS W E+ + +S+K+AL++
Sbjct: 127 QREGHQVDEFSLEISLPAVIAANDRAIRLYMKEKYGSANWFDEKIFSQQTMSVKEALRIL 186
Query: 477 VTDSLETLLAGKYALGSFHICLTYTQTKASSWLLGCQDRNQDFKRRKTETVDSVQGLECS 298
+ S+E + K+ SF I LTYT + S LL N ++RKTE+ D +
Sbjct: 187 LVPSVEKQMNVKHGNNSFRIRLTYTHDEGSQKLLRLLP-NDHGRKRKTESRDGSSKRGST 245
Query: 297 EDAS---GEVGSAMDTSLNGLQDSES---FNSAPEKVKEPCCLTCHCYRTPIYVGGRYLK 136
+D E + ++ +L G+QD + F PEKV EPC L C R+PIY+GGRYLK
Sbjct: 246 DDDKQILSESDAFINKTLEGIQDQDFRSLFQLPPEKVLEPCHLVISCQRSPIYIGGRYLK 305
Query: 135 YSRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAG 1
SRNVSQ+ WIIDDERMGEASVEEIIG + IC+GD YKFHAAG
Sbjct: 306 LSRNVSQSCWIIDDERMGEASVEEIIGENVRAICKGDGYKFHAAG 350