BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003480
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC83464.1| eIF3c [Arabidopsis thaliana]                            62   7e-08
ref|NP_191174.1| translation initiation factor eIF-3 subunit 8 [...    62   7e-08
tpg|DAA62033.1| TPA: hypothetical protein ZEAMMB73_638605 [Zea m...    62   7e-08
ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arab...    62   7e-08
ref|XP_004159873.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...    62   9e-08

>gb|AAC83464.1| eIF3c [Arabidopsis thaliana]
          Length = 900

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = +1

Query: 439 SSFHGKTRKQEIMERRRQMPYHMHINLELLDAVHLI 546
           S +H KT +QE MERRRQMPYHMH+NLELL+AVHLI
Sbjct: 584 SRYHEKTPEQERMERRRQMPYHMHLNLELLEAVHLI 619


>ref|NP_191174.1| translation initiation factor eIF-3 subunit 8 [Arabidopsis
           thaliana] gi|334186011|ref|NP_001190102.1| translation
           initiation factor eIF-3 subunit 8 [Arabidopsis thaliana]
           gi|23503063|sp|O49160.2|EIF3C_ARATH RecName:
           Full=Eukaryotic translation initiation factor 3 subunit
           C; Short=eIF3c; AltName: Full=Eukaryotic translation
           initiation factor 3 subunit 8; AltName: Full=eIF3 p110;
           AltName: Full=p105 gi|7572913|emb|CAB87414.1| PROBABLE
           EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 8
           [Arabidopsis thaliana] gi|17381100|gb|AAL36362.1|
           putative eukaryotic translation initiation factor 3
           subunit 8 [Arabidopsis thaliana]
           gi|25054977|gb|AAN71960.1| putative eukaryotic
           translation initiation factor 3 subunit 8 [Arabidopsis
           thaliana] gi|332645965|gb|AEE79486.1| translation
           initiation factor eIF-3 subunit 8 [Arabidopsis thaliana]
           gi|332645966|gb|AEE79487.1| translation initiation
           factor eIF-3 subunit 8 [Arabidopsis thaliana]
          Length = 900

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = +1

Query: 439 SSFHGKTRKQEIMERRRQMPYHMHINLELLDAVHLI 546
           S +H KT +QE MERRRQMPYHMH+NLELL+AVHLI
Sbjct: 584 SRYHEKTPEQERMERRRQMPYHMHLNLELLEAVHLI 619


>tpg|DAA62033.1| TPA: hypothetical protein ZEAMMB73_638605 [Zea mays]
          Length = 915

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = +1

Query: 433 QISSFHGKTRKQEIMERRRQMPYHMHINLELLDAVHLI 546
           Q S FH KT +QE +ERRRQMPYHMHINLELL+A HLI
Sbjct: 696 QQSRFHEKTPEQERLERRRQMPYHMHINLELLEATHLI 733


>ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arabidopsis lyrata subsp.
           lyrata] gi|297323908|gb|EFH54329.1| hypothetical protein
           ARALYDRAFT_486056 [Arabidopsis lyrata subsp. lyrata]
          Length = 888

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = +1

Query: 439 SSFHGKTRKQEIMERRRQMPYHMHINLELLDAVHLI 546
           S +H KT +QE MERRRQMPYHMH+NLELL+AVHLI
Sbjct: 572 SRYHEKTPEQERMERRRQMPYHMHLNLELLEAVHLI 607


>ref|XP_004159873.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit C-like [Cucumis sativus]
          Length = 939

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = +1

Query: 439 SSFHGKTRKQEIMERRRQMPYHMHINLELLDAVHLI 546
           S +H KT +QE +ERRRQMPYHMHINLELL+AVHLI
Sbjct: 600 SRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLI 635