BLASTX nr result

ID: Coptis24_contig00003478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003478
         (1837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546175.1| PREDICTED: uncharacterized membrane protein ...   550   e-154
ref|XP_004134786.1| PREDICTED: uncharacterized membrane protein ...   547   e-153
ref|XP_003534726.1| PREDICTED: uncharacterized membrane protein ...   544   e-152
ref|XP_004172178.1| PREDICTED: uncharacterized membrane protein ...   540   e-151
ref|XP_003594168.1| Membrane protein, putative [Medicago truncat...   538   e-150

>ref|XP_003546175.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Glycine
            max]
          Length = 417

 Score =  550 bits (1416), Expect = e-154
 Identities = 288/426 (67%), Positives = 327/426 (76%), Gaps = 9/426 (2%)
 Frame = -3

Query: 1754 MGTRIPSHQLSSGLYVSGGRPEQFKERQPSMGSRPVPYTGGDVKKSGELGKMFDIPMLDP 1575
            MGTRIPSHQLSSGLYVSG RPEQ KER P+M SR VPYTGGD KKSGELGKM +IP ++P
Sbjct: 1    MGTRIPSHQLSSGLYVSG-RPEQVKERPPTMTSRSVPYTGGDPKKSGELGKMLEIPGVEP 59

Query: 1574 CXXXXXXXXXXXXXXXXXXSTSNSGQLAK--TNSGPLKKSTSGSIP--LHPTGLI-SGSG 1410
                               S  NSG      + SGP+ + +SGS P  L PTGLI SG  
Sbjct: 60   --------KPSRPSSGSVRSGPNSGPAGGRLSGSGPMSRKSSGSGPIALQPTGLITSGPV 111

Query: 1409 EVRRSGQLEQSV----GKTVYGAAVTSVGEDLKFGFRLSKVIMWXXXXXXXXXXXXXXXX 1242
              RRSGQLEQ      GK VYG+AVTS+ E+++ GFR+S+ ++W                
Sbjct: 112  GSRRSGQLEQPAATAGGKMVYGSAVTSLSEEVRVGFRVSRAVVWVFMVVVAMSLLVGVFL 171

Query: 1241 MATVKNPFILVVVGAIFVPVMAVVMWNCFWRKRGLLGFVNRYPDAELRSARDGQFVKVTG 1062
            M  VK   ILV +GA+ VPV+ ++ WNC W +RGLLGFV RYPDAELR A DGQ+VKVTG
Sbjct: 172  MVAVKKAVILVALGAVIVPVVVLIAWNCVWGRRGLLGFVKRYPDAELRGAIDGQYVKVTG 231

Query: 1061 VVTCGSIPLESSYQRLPRCAYVSTELYEYKGWGGKSANSKHWSFTWGLRYSEKHVADFYV 882
            VVTCGSIPLESSYQR+PRC YVSTELYEYKG GGKSANSKH  FTWG RYSEK+VADFYV
Sbjct: 232  VVTCGSIPLESSYQRVPRCVYVSTELYEYKGLGGKSANSKHRCFTWGSRYSEKYVADFYV 291

Query: 881  SDFQSGLRALVKAGYGAKVAPFVKPTAVVEITKENRELSPSFLRWLADRNLSSDDRIMRL 702
            SDFQSGLRALVKAGYGAKVAPFV+PT VV+ITK+NRELSP+FL WLADR LSSDDRIMRL
Sbjct: 292  SDFQSGLRALVKAGYGAKVAPFVEPTTVVDITKDNRELSPNFLGWLADRKLSSDDRIMRL 351

Query: 701  EEGYIKEGSTVSVMGIVQRHENVLMIIPSPIPASSGCQWLRCLLPTYIEGLILKCDESQN 522
            +EGYIKEGSTVSVMG+VQRH+NVLMI+P+  P S+GCQW+RCLLPTY+EGLIL CD+SQN
Sbjct: 352  KEGYIKEGSTVSVMGVVQRHDNVLMIVPAAEPVSTGCQWIRCLLPTYVEGLILTCDDSQN 411

Query: 521  ADVIPV 504
            ADVIPV
Sbjct: 412  ADVIPV 417


>ref|XP_004134786.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis
            sativus]
          Length = 439

 Score =  547 bits (1409), Expect = e-153
 Identities = 279/440 (63%), Positives = 330/440 (75%), Gaps = 23/440 (5%)
 Frame = -3

Query: 1754 MGTRIPSHQLSSGLYVSGGRPEQFKERQPSMGSRPVPYTGGDVKKSGELGKMFDIPMLD- 1578
            MG+RIPSHQLSSGLYVSG RPEQ KER P+MGSR VPYTGGD+KKSGELGKMFD+ ++D 
Sbjct: 1    MGSRIPSHQLSSGLYVSG-RPEQLKERPPTMGSRAVPYTGGDIKKSGELGKMFDLHLVDS 59

Query: 1577 -----PCXXXXXXXXXXXXXXXXXXSTSNSGQLAK-TNSGPLKKSTSGSIPLHPTGLIS- 1419
                 P                   S  NSG + K +NSGP+ K +SG I L PTGLI+ 
Sbjct: 60   PTSAPPPSKSSRPSSSSQHNSGSVRSGPNSGPVTKHSNSGPISKKSSGPISLQPTGLITS 119

Query: 1418 ----GSGEV---------RRSGQLEQ--SVGKTVYGAAVTSVGEDLKFGFRLSKVIMWXX 1284
                GSG +         RRSG LEQ  S GKT+YG+AVTS+ ED+K GF++SK ++W  
Sbjct: 120  GPMMGSGSLGSSGSVGGGRRSGPLEQTASSGKTMYGSAVTSLSEDVKIGFKVSKAVVWAF 179

Query: 1283 XXXXXXXXXXXXXXMATVKNPFILVVVGAIFVPVMAVVMWNCFWRKRGLLGFVNRYPDAE 1104
                          M  VK P ILV    + VP + VV+WN  W K+GL+GFV RYPDAE
Sbjct: 180  LVILVTGLLVGGFLMVAVKKPIILVAAAGLLVPAVVVVLWNIAWGKKGLIGFVGRYPDAE 239

Query: 1103 LRSARDGQFVKVTGVVTCGSIPLESSYQRLPRCAYVSTELYEYKGWGGKSANSKHWSFTW 924
            LR A DGQ+VKVTGVVTCGSIPLESSYQ++ RC YVSTELYEYKGWGGK AN KH  F+W
Sbjct: 240  LRGAIDGQYVKVTGVVTCGSIPLESSYQKVGRCVYVSTELYEYKGWGGKPANPKHRCFSW 299

Query: 923  GLRYSEKHVADFYVSDFQSGLRALVKAGYGAKVAPFVKPTAVVEITKENRELSPSFLRWL 744
            G RYSE++VADFY+SDFQSGLRALVKAGYGAKVAPFVKP+ VV++TKENR+LSP+FLRWL
Sbjct: 300  GSRYSERYVADFYISDFQSGLRALVKAGYGAKVAPFVKPSTVVDVTKENRDLSPTFLRWL 359

Query: 743  ADRNLSSDDRIMRLEEGYIKEGSTVSVMGIVQRHENVLMIIPSPIPASSGCQWLRCLLPT 564
            ADR LSSDDR+MRL+EGYIKEGSTVSVMG+V+R +N+LM++PS  P S+GCQW RCLLPT
Sbjct: 360  ADRKLSSDDRVMRLKEGYIKEGSTVSVMGVVRRQDNILMVVPSTEPVSTGCQWARCLLPT 419

Query: 563  YIEGLILKCDESQNADVIPV 504
            Y+EGLI+ CD++QNADV+PV
Sbjct: 420  YVEGLIVTCDDNQNADVVPV 439


>ref|XP_003534726.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Glycine
            max]
          Length = 420

 Score =  544 bits (1401), Expect = e-152
 Identities = 286/429 (66%), Positives = 324/429 (75%), Gaps = 12/429 (2%)
 Frame = -3

Query: 1754 MGTRIPSHQLSSGLYVSGGRPEQFKERQPSMGSRPVPYTGGDVKKSGELGKMFDIPMLDP 1575
            MGTRIPSHQLSSGLYVSG RPEQ KER P+M SR VPYTGGD KKSGELGKM +IP ++P
Sbjct: 1    MGTRIPSHQLSSGLYVSG-RPEQVKERPPTMTSRSVPYTGGDPKKSGELGKMLEIPGVEP 59

Query: 1574 CXXXXXXXXXXXXXXXXXXSTSNSGQLAK--TNSGPLKKSTSGSIP--LHPTGLI-SGSG 1410
                               S  NSG      + SGP+ + +SGS P  L PTGLI SG  
Sbjct: 60   --------KPSRPSSGSVRSGPNSGPAGGRLSGSGPMSRKSSGSGPIALQPTGLITSGPV 111

Query: 1409 EVRRSGQLEQSV-------GKTVYGAAVTSVGEDLKFGFRLSKVIMWXXXXXXXXXXXXX 1251
              RRSGQLEQ         GK VYG+AVTS+ E++K GFR+S+ ++W             
Sbjct: 112  GSRRSGQLEQPTAAAPTAGGKMVYGSAVTSLSEEVKVGFRVSRAVVWVFMVVVAMSLLVG 171

Query: 1250 XXXMATVKNPFILVVVGAIFVPVMAVVMWNCFWRKRGLLGFVNRYPDAELRSARDGQFVK 1071
               M  VK   ILV +GA+ VPV+ ++ WNC W +RGLLGFV RYPDAELR A DGQ+VK
Sbjct: 172  VFLMVAVKKAMILVALGAVIVPVVVLIAWNCVWGRRGLLGFVKRYPDAELRGAIDGQYVK 231

Query: 1070 VTGVVTCGSIPLESSYQRLPRCAYVSTELYEYKGWGGKSANSKHWSFTWGLRYSEKHVAD 891
            VTGVVTCGSIPLESSYQR+PRC YVSTELYEYKG G KSAN KH  FTWG RYSEK++AD
Sbjct: 232  VTGVVTCGSIPLESSYQRVPRCVYVSTELYEYKGLGEKSANPKHRCFTWGSRYSEKYIAD 291

Query: 890  FYVSDFQSGLRALVKAGYGAKVAPFVKPTAVVEITKENRELSPSFLRWLADRNLSSDDRI 711
            FYVSDFQSGLRALVKAGYGAKVAPFV+PT VV+ITK+NRELSP+FL WLAD  LSSDDRI
Sbjct: 292  FYVSDFQSGLRALVKAGYGAKVAPFVEPTTVVDITKDNRELSPNFLGWLADHKLSSDDRI 351

Query: 710  MRLEEGYIKEGSTVSVMGIVQRHENVLMIIPSPIPASSGCQWLRCLLPTYIEGLILKCDE 531
            MRL+EGYIKEGSTVSVMG+VQRHENVLMI+P+  P S+GCQW+RCLLPTY+EGLIL CD+
Sbjct: 352  MRLKEGYIKEGSTVSVMGVVQRHENVLMIVPASEPVSTGCQWIRCLLPTYVEGLILTCDD 411

Query: 530  SQNADVIPV 504
            SQNADVIPV
Sbjct: 412  SQNADVIPV 420


>ref|XP_004172178.1| PREDICTED: uncharacterized membrane protein At1g16860-like, partial
            [Cucumis sativus]
          Length = 435

 Score =  540 bits (1392), Expect = e-151
 Identities = 276/436 (63%), Positives = 326/436 (74%), Gaps = 23/436 (5%)
 Frame = -3

Query: 1742 IPSHQLSSGLYVSGGRPEQFKERQPSMGSRPVPYTGGDVKKSGELGKMFDIPMLD----- 1578
            IPSHQLSSGLYVSG RPEQ KER P+MGSR VPYTGGD+KKSGELGKMFD+ ++D     
Sbjct: 1    IPSHQLSSGLYVSG-RPEQLKERPPTMGSRAVPYTGGDIKKSGELGKMFDLHLVDSPTSA 59

Query: 1577 -PCXXXXXXXXXXXXXXXXXXSTSNSGQLAK-TNSGPLKKSTSGSIPLHPTGLIS----- 1419
             P                   S  NSG + K +NSGP+ K +SG I L PTGLI+     
Sbjct: 60   PPPSKSSRPSSSSQHNSGSVRSGPNSGPVTKHSNSGPISKKSSGPISLQPTGLITSGPMM 119

Query: 1418 GSGEV---------RRSGQLEQ--SVGKTVYGAAVTSVGEDLKFGFRLSKVIMWXXXXXX 1272
            GSG +         RRSG LEQ  S GKT+YG+AVTS+ ED+K GF++SK ++W      
Sbjct: 120  GSGSLGSSGSVGGGRRSGPLEQTASSGKTMYGSAVTSLSEDVKIGFKVSKAVVWAFLVIL 179

Query: 1271 XXXXXXXXXXMATVKNPFILVVVGAIFVPVMAVVMWNCFWRKRGLLGFVNRYPDAELRSA 1092
                      M  VK P ILV    + VP + VV+WN  W K+GL+GFV RYPDAELR A
Sbjct: 180  VTGLLVGGFLMVAVKKPIILVAAAGLLVPAVVVVLWNIAWGKKGLIGFVGRYPDAELRGA 239

Query: 1091 RDGQFVKVTGVVTCGSIPLESSYQRLPRCAYVSTELYEYKGWGGKSANSKHWSFTWGLRY 912
             DGQ+VKVTGVVTCGSIPLESSYQ++ RC YVSTELYEYKGWGGK AN KH  F+WG RY
Sbjct: 240  IDGQYVKVTGVVTCGSIPLESSYQKVGRCVYVSTELYEYKGWGGKPANPKHRCFSWGSRY 299

Query: 911  SEKHVADFYVSDFQSGLRALVKAGYGAKVAPFVKPTAVVEITKENRELSPSFLRWLADRN 732
            SE++VADFY+SDFQSGLRALVKAGYGAKVAPFVKP+ VV++TKENR+LSP+FLRWLADR 
Sbjct: 300  SERYVADFYISDFQSGLRALVKAGYGAKVAPFVKPSTVVDVTKENRDLSPTFLRWLADRK 359

Query: 731  LSSDDRIMRLEEGYIKEGSTVSVMGIVQRHENVLMIIPSPIPASSGCQWLRCLLPTYIEG 552
            LSSDDR+MRL+EGYIKEGSTVSVMG+V+R +N+LM++PS  P S+GCQW RCLLPTY+EG
Sbjct: 360  LSSDDRVMRLKEGYIKEGSTVSVMGVVRRQDNILMVVPSTEPVSTGCQWARCLLPTYVEG 419

Query: 551  LILKCDESQNADVIPV 504
            LI+ CD++QNADV+PV
Sbjct: 420  LIVTCDDNQNADVVPV 435


>ref|XP_003594168.1| Membrane protein, putative [Medicago truncatula]
            gi|355483216|gb|AES64419.1| Membrane protein, putative
            [Medicago truncatula]
          Length = 428

 Score =  538 bits (1386), Expect = e-150
 Identities = 283/431 (65%), Positives = 331/431 (76%), Gaps = 14/431 (3%)
 Frame = -3

Query: 1754 MGTRIPSHQLSSGLYVSGGRPEQFKERQP-SMGSRPVPYTGGDVKKSGELGKMFDIPMLD 1578
            MGTRIPSHQLSSGLYVSG RPEQ KERQP +M SR VPYTGGD KKSGELGKM DIP+LD
Sbjct: 1    MGTRIPSHQLSSGLYVSG-RPEQPKERQPPTMASRSVPYTGGDPKKSGELGKMLDIPVLD 59

Query: 1577 PCXXXXXXXXXXXXXXXXXXSTSNSGQLAK--TNSGPLKKSTSGSIP--LHPTGLIS--- 1419
            P                   S  NSGQ+ K  T SG L + ++GS P  L PTGLI+   
Sbjct: 60   P--KSHPSSSSSQLSTGPARSRPNSGQVGKNITGSGTLSRKSTGSGPIALQPTGLITSGP 117

Query: 1418 -GSGEV---RRSGQLEQS--VGKTVYGAAVTSVGEDLKFGFRLSKVIMWXXXXXXXXXXX 1257
             GSG V   RRSGQLEQS  +GK VYG+AVTS+GE++K GFR+S+ ++W           
Sbjct: 118  VGSGPVGASRRSGQLEQSGSMGKAVYGSAVTSLGEEVKVGFRVSRSVVWVFMVVVAMCLL 177

Query: 1256 XXXXXMATVKNPFILVVVGAIFVPVMAVVMWNCFWRKRGLLGFVNRYPDAELRSARDGQF 1077
                 M  VK   IL  +G + VPV+ +++WNC   ++GLLGFV RYPDAELR A DGQ+
Sbjct: 178  VGVFLMVAVKKNVILFALGGVIVPVLVLIIWNCVLGRKGLLGFVKRYPDAELRGAIDGQY 237

Query: 1076 VKVTGVVTCGSIPLESSYQRLPRCAYVSTELYEYKGWGGKSANSKHWSFTWGLRYSEKHV 897
            VKVTGVVTCGSIPLESSYQR+PRC YVS+ELYEYKGWGGKSA+ KH  FTWG RYSEK++
Sbjct: 238  VKVTGVVTCGSIPLESSYQRIPRCVYVSSELYEYKGWGGKSAHPKHRCFTWGSRYSEKYI 297

Query: 896  ADFYVSDFQSGLRALVKAGYGAKVAPFVKPTAVVEITKENRELSPSFLRWLADRNLSSDD 717
            ADFY+SDFQ+GLRALVKAGYG KVAPFVKPT VV++TKENRELSP+FL WLADR LS+DD
Sbjct: 298  ADFYISDFQTGLRALVKAGYGNKVAPFVKPTTVVDVTKENRELSPNFLGWLADRKLSTDD 357

Query: 716  RIMRLEEGYIKEGSTVSVMGIVQRHENVLMIIPSPIPASSGCQWLRCLLPTYIEGLILKC 537
            RIMRL+EG+IKEGSTVSVMG+V+RHENVLMI+P   P S+GCQW+RCLLPT +EGLI+ C
Sbjct: 358  RIMRLKEGHIKEGSTVSVMGVVRRHENVLMIVPPTEPVSTGCQWMRCLLPTGVEGLIITC 417

Query: 536  DESQNADVIPV 504
            +++QNADVI V
Sbjct: 418  EDNQNADVIAV 428


Top