BLASTX nr result

ID: Coptis24_contig00003461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003461
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635047.1| PREDICTED: uncharacterized protein LOC100853...    90   4e-16
ref|XP_002274430.1| PREDICTED: uncharacterized protein LOC100261...    90   4e-16
ref|XP_002530699.1| conserved hypothetical protein [Ricinus comm...    90   6e-16
ref|NP_001063416.1| Os09g0465800 [Oryza sativa Japonica Group] g...    85   1e-14
ref|XP_003578258.1| PREDICTED: uncharacterized protein LOC100828...    84   3e-14

>ref|XP_003635047.1| PREDICTED: uncharacterized protein LOC100853187 isoform 1 [Vitis
           vinifera] gi|359495655|ref|XP_003635048.1| PREDICTED:
           uncharacterized protein LOC100853187 isoform 2 [Vitis
           vinifera] gi|297735931|emb|CBI18707.3| unnamed protein
           product [Vitis vinifera]
          Length = 204

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 41/81 (50%), Positives = 55/81 (67%)
 Frame = +1

Query: 340 DSENAYPILIYXXXXXXXXXXXXXXXXXIDSIPVVPKLLELVGLAFTIWFASRYLIFKEN 519
           DSE+ Y I +Y                 IDSIP+ PKL+E+VGL +T+WF++RYLIFK+N
Sbjct: 124 DSEDPYSIFLYGTGALTALWFASAIVGAIDSIPIFPKLMEIVGLGYTLWFSARYLIFKQN 183

Query: 520 RDELSTKFEELKQQIIGLTDD 582
           RDEL+ K EELKQQ++G  D+
Sbjct: 184 RDELAAKIEELKQQVLGSEDE 204


>ref|XP_002274430.1| PREDICTED: uncharacterized protein LOC100261101 [Vitis vinifera]
           gi|297735928|emb|CBI18704.3| unnamed protein product
           [Vitis vinifera]
          Length = 204

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 41/81 (50%), Positives = 55/81 (67%)
 Frame = +1

Query: 340 DSENAYPILIYXXXXXXXXXXXXXXXXXIDSIPVVPKLLELVGLAFTIWFASRYLIFKEN 519
           DSE+ Y I +Y                 IDSIP+ PKL+E+VGL +T+WF++RYLIFK+N
Sbjct: 124 DSEDPYSIFLYGTGALTALWFASAIVGAIDSIPIFPKLMEIVGLGYTLWFSARYLIFKQN 183

Query: 520 RDELSTKFEELKQQIIGLTDD 582
           RDEL+ K EELKQQ++G  D+
Sbjct: 184 RDELAAKIEELKQQVLGSEDE 204


>ref|XP_002530699.1| conserved hypothetical protein [Ricinus communis]
           gi|223529755|gb|EEF31694.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 94

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 41/81 (50%), Positives = 55/81 (67%)
 Frame = +1

Query: 340 DSENAYPILIYXXXXXXXXXXXXXXXXXIDSIPVVPKLLELVGLAFTIWFASRYLIFKEN 519
           DSE+ Y +L Y                 IDSIP++PKL+E+VGL ++IWF +RYL+FKEN
Sbjct: 14  DSEDTYSVLFYGGSAVVALWLGSAVVGAIDSIPLIPKLMEVVGLGYSIWFTTRYLLFKEN 73

Query: 520 RDELSTKFEELKQQIIGLTDD 582
           RDE  TK EELKQQ++G ++D
Sbjct: 74  RDEFVTKVEELKQQVLGSSND 94


>ref|NP_001063416.1| Os09g0465800 [Oryza sativa Japonica Group]
           gi|46806318|dbj|BAD17510.1| unknown protein [Oryza
           sativa Japonica Group] gi|113631649|dbj|BAF25330.1|
           Os09g0465800 [Oryza sativa Japonica Group]
           gi|215693022|dbj|BAG88442.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218202295|gb|EEC84722.1| hypothetical protein
           OsI_31690 [Oryza sativa Indica Group]
           gi|222641735|gb|EEE69867.1| hypothetical protein
           OsJ_29675 [Oryza sativa Japonica Group]
          Length = 181

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 39/81 (48%), Positives = 53/81 (65%)
 Frame = +1

Query: 340 DSENAYPILIYXXXXXXXXXXXXXXXXXIDSIPVVPKLLELVGLAFTIWFASRYLIFKEN 519
           DSEN+Y  L+Y                 +DS+P+VP+++E+VGL FT+WF SRYLIFKEN
Sbjct: 101 DSENSYTALVYGTSALVTIWISSIVVSALDSVPLVPQVMEVVGLGFTVWFTSRYLIFKEN 160

Query: 520 RDELSTKFEELKQQIIGLTDD 582
           RDEL T+   +K+QI+G   D
Sbjct: 161 RDELITRIGSIKKQILGSRGD 181


>ref|XP_003578258.1| PREDICTED: uncharacterized protein LOC100828540 [Brachypodium
           distachyon]
          Length = 182

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 37/81 (45%), Positives = 54/81 (66%)
 Frame = +1

Query: 340 DSENAYPILIYXXXXXXXXXXXXXXXXXIDSIPVVPKLLELVGLAFTIWFASRYLIFKEN 519
           DS+++Y  L+Y                 +DS+PVVP+++E+VGL FT+WF SRYLIFKEN
Sbjct: 102 DSDSSYTALVYGTSALVAVWISSIVVSALDSVPVVPQVMEVVGLGFTVWFTSRYLIFKEN 161

Query: 520 RDELSTKFEELKQQIIGLTDD 582
           RDEL T+   +K+Q++G  D+
Sbjct: 162 RDELITRIGSIKKQVLGSRDE 182


Top