BLASTX nr result
ID: Coptis24_contig00003460
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003460
(1768 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis ... 544 e-152
emb|CBI31221.3| unnamed protein product [Vitis vinifera] 544 e-152
ref|XP_002319182.1| predicted protein [Populus trichocarpa] gi|2... 541 e-151
ref|XP_003551099.1| PREDICTED: exosome component 10-like [Glycin... 540 e-151
ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycin... 536 e-150
>ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis vinifera]
Length = 931
Score = 544 bits (1401), Expect = e-152
Identities = 312/613 (50%), Positives = 396/613 (64%), Gaps = 32/613 (5%)
Frame = +3
Query: 3 PFEHVWLQRTDDGTRPVHPLENLSGSDFVDKNVGSIEPVKSLPLENTPFKLVEEVRELKH 182
PF+HVWLQR+DDG R +HPLE LS DFVDKN+G + PV +E+TPFKLVEEVR+LK
Sbjct: 198 PFQHVWLQRSDDGLRFIHPLEKLSLLDFVDKNIGDLMPVMPPSIEDTPFKLVEEVRDLKE 257
Query: 183 LAAKLRSVDEFAVDLEHNQYRSFQGLTCLMQISTRTEDYVIDTLKLRVHIGPYLRDVFKD 362
LAAKL V+EFAVDLEHNQYRSFQGLTCLMQISTRTED+V+DTLKLR+H+GPYLR+VFKD
Sbjct: 258 LAAKLCCVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKD 317
Query: 363 PSKRKVMHGADRDIVWLQRDFGIYVCNLFDTHQASRVLDLERNSLEYLLLYFCGVIVNKD 542
P+K+KVMHGADRDI+WLQRDFGIY+CN+FDT QASRVL LERNSLE+LL ++CGV NK+
Sbjct: 318 PTKKKVMHGADRDIIWLQRDFGIYICNMFDTGQASRVLKLERNSLEHLLHHYCGVTANKE 377
Query: 543 YQNADWRLRPLPDDMLKYAREDTHXXXXXXXXXXXXXFSASIGSKEGNDLLLEVYRRSYD 722
YQN DWRLRPLP +ML+YAREDTH S + + N LLLEVY+RS+D
Sbjct: 378 YQNGDWRLRPLPHEMLRYAREDTHYLLHIYDLMRTQLLSMA-ELENSNALLLEVYKRSFD 436
Query: 723 VCLQLYEKELLTNMSYLYIYGVQEANFSSHQLSIVAGLCEWRDAVARAEDESTGYILPNK 902
+C+QLYEKELLT+ SYLY YG+Q A+F++ QL+IVAGL EWRD VARAEDESTGYILPNK
Sbjct: 437 ICMQLYEKELLTDSSYLYTYGLQGAHFNAQQLAIVAGLFEWRDVVARAEDESTGYILPNK 496
Query: 903 TILEIARQMPVTVSKLRRLVKSKHPYVEVNLDSIVDIIKSSIRNGAAFESVAQQLQERRQ 1082
T+LEIA+QMPVT SKLRRL+KSKHPYVE NL +V II+ SI N AAFE+ AQ L+E
Sbjct: 497 TLLEIAKQMPVTTSKLRRLLKSKHPYVERNLGPVVSIIRHSILNAAAFEAAAQHLKEGHI 556
Query: 1083 EIVTEHNVELTSTVLSQPEK----------------VDGVGGNRANEKTIKCLSTSGCVK 1214
+E N T+ + P + D V +K +S
Sbjct: 557 GTASEDNTVDTTGFEALPSESPTSIRAADARAESFDTDNVINGGKTDKLQTFVSAKEYHM 616
Query: 1215 EENSKLEGGIVQRSRAREGSYLTLSHEGGENKNDQVALLAEVQVESISISGQEREKAESY 1394
E S ++G S+ + GS E E K+++ + + EV E+ + SGQ R+ +++
Sbjct: 617 EPGSTIDG---PGSKGQGGS-SEPPGESKEVKDEKDSFIPEVARETPASSGQSRD-TDTH 671
Query: 1395 SAKAVSGATVEVLNETSHVPGREY------LDSELKFDAVSKG----KVEQIKSSV-FPC 1541
++ + S EV + P R + S+ K ++ KG K+EQIKSSV P
Sbjct: 672 TSVSQSEKVTEVTVQLLKKPNRAFGSLLGNSASKRKLNSDPKGKEDIKLEQIKSSVNLPF 731
Query: 1542 -NLSMSNSEQLKPLGINNQ----EIPSPKISNAMPTGISNLEDIASLGADLADQEPLQSF 1706
+ S N E+L L E + A+P ++LE+I + E +
Sbjct: 732 HSFSGGNREELSKLDTEEHTKVLETQGSEEPLAVPASRNDLEEIIMFEENSGSDESVNGN 791
Query: 1707 PAAVNSCFSRRHD 1745
A N + D
Sbjct: 792 SGAANEQLEGKED 804
>emb|CBI31221.3| unnamed protein product [Vitis vinifera]
Length = 901
Score = 544 bits (1401), Expect = e-152
Identities = 312/613 (50%), Positives = 396/613 (64%), Gaps = 32/613 (5%)
Frame = +3
Query: 3 PFEHVWLQRTDDGTRPVHPLENLSGSDFVDKNVGSIEPVKSLPLENTPFKLVEEVRELKH 182
PF+HVWLQR+DDG R +HPLE LS DFVDKN+G + PV +E+TPFKLVEEVR+LK
Sbjct: 168 PFQHVWLQRSDDGLRFIHPLEKLSLLDFVDKNIGDLMPVMPPSIEDTPFKLVEEVRDLKE 227
Query: 183 LAAKLRSVDEFAVDLEHNQYRSFQGLTCLMQISTRTEDYVIDTLKLRVHIGPYLRDVFKD 362
LAAKL V+EFAVDLEHNQYRSFQGLTCLMQISTRTED+V+DTLKLR+H+GPYLR+VFKD
Sbjct: 228 LAAKLCCVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKD 287
Query: 363 PSKRKVMHGADRDIVWLQRDFGIYVCNLFDTHQASRVLDLERNSLEYLLLYFCGVIVNKD 542
P+K+KVMHGADRDI+WLQRDFGIY+CN+FDT QASRVL LERNSLE+LL ++CGV NK+
Sbjct: 288 PTKKKVMHGADRDIIWLQRDFGIYICNMFDTGQASRVLKLERNSLEHLLHHYCGVTANKE 347
Query: 543 YQNADWRLRPLPDDMLKYAREDTHXXXXXXXXXXXXXFSASIGSKEGNDLLLEVYRRSYD 722
YQN DWRLRPLP +ML+YAREDTH S + + N LLLEVY+RS+D
Sbjct: 348 YQNGDWRLRPLPHEMLRYAREDTHYLLHIYDLMRTQLLSMA-ELENSNALLLEVYKRSFD 406
Query: 723 VCLQLYEKELLTNMSYLYIYGVQEANFSSHQLSIVAGLCEWRDAVARAEDESTGYILPNK 902
+C+QLYEKELLT+ SYLY YG+Q A+F++ QL+IVAGL EWRD VARAEDESTGYILPNK
Sbjct: 407 ICMQLYEKELLTDSSYLYTYGLQGAHFNAQQLAIVAGLFEWRDVVARAEDESTGYILPNK 466
Query: 903 TILEIARQMPVTVSKLRRLVKSKHPYVEVNLDSIVDIIKSSIRNGAAFESVAQQLQERRQ 1082
T+LEIA+QMPVT SKLRRL+KSKHPYVE NL +V II+ SI N AAFE+ AQ L+E
Sbjct: 467 TLLEIAKQMPVTTSKLRRLLKSKHPYVERNLGPVVSIIRHSILNAAAFEAAAQHLKEGHI 526
Query: 1083 EIVTEHNVELTSTVLSQPEK----------------VDGVGGNRANEKTIKCLSTSGCVK 1214
+E N T+ + P + D V +K +S
Sbjct: 527 GTASEDNTVDTTGFEALPSESPTSIRAADARAESFDTDNVINGGKTDKLQTFVSAKEYHM 586
Query: 1215 EENSKLEGGIVQRSRAREGSYLTLSHEGGENKNDQVALLAEVQVESISISGQEREKAESY 1394
E S ++G S+ + GS E E K+++ + + EV E+ + SGQ R+ +++
Sbjct: 587 EPGSTIDG---PGSKGQGGS-SEPPGESKEVKDEKDSFIPEVARETPASSGQSRD-TDTH 641
Query: 1395 SAKAVSGATVEVLNETSHVPGREY------LDSELKFDAVSKG----KVEQIKSSV-FPC 1541
++ + S EV + P R + S+ K ++ KG K+EQIKSSV P
Sbjct: 642 TSVSQSEKVTEVTVQLLKKPNRAFGSLLGNSASKRKLNSDPKGKEDIKLEQIKSSVNLPF 701
Query: 1542 -NLSMSNSEQLKPLGINNQ----EIPSPKISNAMPTGISNLEDIASLGADLADQEPLQSF 1706
+ S N E+L L E + A+P ++LE+I + E +
Sbjct: 702 HSFSGGNREELSKLDTEEHTKVLETQGSEEPLAVPASRNDLEEIIMFEENSGSDESVNGN 761
Query: 1707 PAAVNSCFSRRHD 1745
A N + D
Sbjct: 762 SGAANEQLEGKED 774
>ref|XP_002319182.1| predicted protein [Populus trichocarpa] gi|222857558|gb|EEE95105.1|
predicted protein [Populus trichocarpa]
Length = 858
Score = 541 bits (1395), Expect = e-151
Identities = 301/565 (53%), Positives = 380/565 (67%), Gaps = 8/565 (1%)
Frame = +3
Query: 6 FEHVWLQRTDDGTRPVHPLENLSGSDFVDKNVGSIEPVKSLPLENTPFKLVEEVRELKHL 185
F+HVWL+R++DG R +HPLE LS DF+DK+ G +EP LP+E+T FKLVEEV++LK L
Sbjct: 186 FDHVWLERSEDGLRVIHPLERLSVLDFMDKSTGDVEPAPPLPIESTSFKLVEEVKDLKEL 245
Query: 186 AAKLRSVDEFAVDLEHNQYRSFQGLTCLMQISTRTEDYVIDTLKLRVHIGPYLRDVFKDP 365
AAKLR V+EFAVDLEHNQYRSFQGLTCLMQISTRTED+++DTLKLR+H+GPYLR+VFKDP
Sbjct: 246 AAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFIVDTLKLRIHVGPYLREVFKDP 305
Query: 366 SKRKVMHGADRDIVWLQRDFGIYVCNLFDTHQASRVLDLERNSLEYLLLYFCGVIVNKDY 545
+KRKVMHGADRD+VWLQRDFGIY+CNLFDT QASRVL LERNSLE+LL +FCGV NK+Y
Sbjct: 306 AKRKVMHGADRDVVWLQRDFGIYICNLFDTGQASRVLKLERNSLEHLLHHFCGVTANKEY 365
Query: 546 QNADWRLRPLPDDMLKYAREDTHXXXXXXXXXXXXXFSASIGSKEGNDLLLEVYRRSYDV 725
QNADWRLRPLPD+M++YAREDTH S I ++ + LLEVY+RSYDV
Sbjct: 366 QNADWRLRPLPDEMIRYAREDTHYLLHIYDLMRALLLSKPIDNENADPPLLEVYKRSYDV 425
Query: 726 CLQLYEKELLTNMSYLYIYGVQEANFSSHQLSIVAGLCEWRDAVARAEDESTGYILPNKT 905
C+QLYEKEL T SYL +YG+ A F++ QL+IVAGL EWRDA+ARAEDESTGYILPNKT
Sbjct: 426 CMQLYEKELFTENSYLNMYGLPSAGFNAQQLAIVAGLYEWRDAIARAEDESTGYILPNKT 485
Query: 906 ILEIARQMPVTVSKLRRLVKSKHPYVEVNLDSIVDIIKSSIRNGAAFESVAQQLQERRQE 1085
+LEIA++MPVT+SKLR+L+KSKH Y+E +L S+V II+ S++ AAFE+ Q L+ER E
Sbjct: 486 LLEIAKEMPVTISKLRQLLKSKHSYIERHLSSVVSIIRHSMQTSAAFEAAVQHLKERHME 545
Query: 1086 IVTEHNVELT--STVLSQPEKVDGVGGNRANEKTIKCLSTSGCVKEENSKLEGGIVQRSR 1259
I ++ E S S P GGN N C TS +++ K IV+ R
Sbjct: 546 IASQEETEANDGSEARSIP------GGNGMNSGVAACHETSAQLEKGLLKQGSSIVELGR 599
Query: 1260 AREGSYLTLSHEGGENKNDQVALLAEVQVESISISGQEREKAESYSAKAVSGATVEVLNE 1439
+GS + H A VQV K + + A+ G V
Sbjct: 600 GGQGS--SAKHH------------ATVQV----------LKKPTGAFGALLGGAV----- 630
Query: 1440 TSHVPGREYLDSELKFDAVSKGKVEQIKSSV-FPCNLSMSNSEQLK-----PLGINNQEI 1601
+ LD++ K K K+E+I+SSV P + M +E K P+G++ EI
Sbjct: 631 -----AKRKLDTDKK--VKEKIKLEKIRSSVNLPFHSFMGINEPPKVVVEEPIGVS--EI 681
Query: 1602 PSPKISNAMPTGISNLEDIASLGAD 1676
P+ S +P S+L+DI L D
Sbjct: 682 SHPEESLDVPATGSSLQDIILLDND 706
>ref|XP_003551099.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 889
Score = 540 bits (1390), Expect = e-151
Identities = 299/565 (52%), Positives = 387/565 (68%), Gaps = 11/565 (1%)
Frame = +3
Query: 3 PFEHVWLQRTDDGTRPVHPLENLSGSDFVDKNVGSIEPVKSLPLENTPFKLVEEVRELKH 182
PFEHVWLQR+DDG +HPLE LS +FVD N+G + PVK +E+TPFKLVEEV++LK
Sbjct: 208 PFEHVWLQRSDDGLSFIHPLEKLSVLNFVDTNLGDVVPVKPPSIESTPFKLVEEVKDLKE 267
Query: 183 LAAKLRSVDEFAVDLEHNQYRSFQGLTCLMQISTRTEDYVIDTLKLRVHIGPYLRDVFKD 362
LAAKLRSV+EFAVDLEHNQYRSFQGLTCLMQISTRTED+++DTLKLR+HIGPYLR++FKD
Sbjct: 268 LAAKLRSVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFIVDTLKLRIHIGPYLREIFKD 327
Query: 363 PSKRKVMHGADRDIVWLQRDFGIYVCNLFDTHQASRVLDLERNSLEYLLLYFCGVIVNKD 542
P+KRKVMHGADRDI WLQRDFGIY+CNLFDTHQAS++L+LERNSLE++L +FC V NK+
Sbjct: 328 PAKRKVMHGADRDIAWLQRDFGIYICNLFDTHQASKLLNLERNSLEHILHHFCEVTANKE 387
Query: 543 YQNADWRLRPLPDDMLKYAREDTHXXXXXXXXXXXXXFSAS--IGSKEGNDL-LLEVYRR 713
YQNADWRLRPLPD+M++YAREDTH F+ S S E +D L+EVY+R
Sbjct: 388 YQNADWRLRPLPDEMIRYAREDTHYLLYIYDLMRIKLFALSKESESSESSDTPLVEVYKR 447
Query: 714 SYDVCLQLYEKELLTNMSYLYIYGVQEANFSSHQLSIVAGLCEWRDAVARAEDESTGYIL 893
SYDVC+QLYEKELLT SYL+IYG+Q A F++ QL+IV+GLCEWRD VARAEDESTGY+L
Sbjct: 448 SYDVCIQLYEKELLTENSYLHIYGLQGAGFNAQQLAIVSGLCEWRDIVARAEDESTGYVL 507
Query: 894 PNKTILEIARQMPVTVSKLRRLVKSKHPYVEVNLDSIVDIIKSSIRNGAAFESVAQQLQE 1073
PNK++LEIA+QMP+T SKLRRLVKSKHPYVE NLD++V II+ SI+N A+FE AQQL+E
Sbjct: 508 PNKSVLEIAKQMPLTTSKLRRLVKSKHPYVEHNLDTVVSIIRHSIQNAASFEEAAQQLKE 567
Query: 1074 RRQEIVTEHNVELTSTVLSQPEKVDGVGGNRANEKTIKCLSTSGCVKEENSKLEGGIVQR 1253
Q + V +T P R ++++ + +TS +K +++
Sbjct: 568 -AQAVTASDVVPVTDGTEDPPSH------TRHSKESSQHQATSVPIKIKSN--------- 611
Query: 1254 SRAREGSYLTLSHEGGENKNDQVALLAEVQVESISISGQERE-KAESYSAKAVSGATVEV 1430
+L+ E +S++I+ Q R+ + S +GA V+V
Sbjct: 612 -----------------------SLIFEPPKDSLTIAEQNRDANVGALSTAKGNGAAVQV 648
Query: 1431 LNETSHVPGREYLDSELKFDAVSKG------KVEQIKSSV-FPCNLSMSNSEQLKPLGIN 1589
L + + G L S + G K+EQI+SSV P + + +SE+ +P
Sbjct: 649 LKKPTGAFG-ALLGSSASKRKLGPGKGKEEIKLEQIRSSVSLPFHSFLGSSEKSEP---- 703
Query: 1590 NQEIPSPKISNAMPTGISNLEDIAS 1664
+EIPS +++ M + D+ S
Sbjct: 704 TEEIPS--VASEMSEPQKPVSDVVS 726
>ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 877
Score = 536 bits (1380), Expect = e-150
Identities = 301/585 (51%), Positives = 385/585 (65%), Gaps = 18/585 (3%)
Frame = +3
Query: 3 PFEHVWLQRTDDGTRPVHPLENLSGSDFVDKNVGSIEPVKSLPLENTPFKLVEEVRELKH 182
PFEHVWLQR+DDG R +HPLE LS DFVD N+ + PVK +E+TPFKLV+EV++LK
Sbjct: 204 PFEHVWLQRSDDGLRFIHPLEKLSVLDFVDTNLEDVVPVKPPSIESTPFKLVQEVKDLKE 263
Query: 183 LAAKLRSVDEFAVDLEHNQYRSFQGLTCLMQISTRTEDYVIDTLKLRVHIGPYLRDVFKD 362
L AKLRSV+EFAVDLEHNQYRSFQGLTCLMQISTRTED+V+DTLKLR+HIGPYLR++FKD
Sbjct: 264 LVAKLRSVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHIGPYLREIFKD 323
Query: 363 PSKRKVMHGADRDIVWLQRDFGIYVCNLFDTHQASRVLDLERNSLEYLLLYFCGVIVNKD 542
P+KRKVMHGADRDIVWLQRDFGIY+CNLFDTHQAS++L+LERNSLE++L +FC V NK+
Sbjct: 324 PAKRKVMHGADRDIVWLQRDFGIYICNLFDTHQASKLLNLERNSLEHILHHFCEVTANKE 383
Query: 543 YQNADWRLRPLPDDMLKYAREDTHXXXXXXXXXXXXXFSAS--IGSKEGNDL-LLEVYRR 713
YQNADWRLRPLP++ML+YAREDTH F+ S S E +D +EVY+R
Sbjct: 384 YQNADWRLRPLPNEMLRYAREDTHYLLYIYDLMRIRLFALSKESESSESSDTPPVEVYKR 443
Query: 714 SYDVCLQLYEKELLTNMSYLYIYGVQEANFSSHQLSIVAGLCEWRDAVARAEDESTGYIL 893
SYDVC+QLYEKE LT SYL+IYG+Q A F++ QL+IV+GLCEWRD VARAEDESTGY+L
Sbjct: 444 SYDVCMQLYEKEFLTENSYLHIYGLQGAGFNAQQLAIVSGLCEWRDIVARAEDESTGYVL 503
Query: 894 PNKTILEIARQMPVTVSKLRRLVKSKHPYVEVNLDSIVDIIKSSIRNGAAFESVAQQLQE 1073
PNK++LEIA+QMP+T SKLRRLVKSKHPYVE NLD++V II+ SI+N AAFE AQQL+E
Sbjct: 504 PNKSVLEIAKQMPLTTSKLRRLVKSKHPYVEHNLDTVVSIIRHSIQNSAAFEEAAQQLKE 563
Query: 1074 RRQEIVTEHNVELTSTVLSQPEKVDGVGGNRANEKTIKCLSTSGCVKEENSKLEGGIVQR 1253
+ ++ T Q D + + + S ++ E K
Sbjct: 564 AQAGTASDVVPFTDGTEDPQSHTQDSKESSNHQDTNVPINLKSNSLRSEPPK-------- 615
Query: 1254 SRAREGSYLTLSHEGGENKNDQVALLAEVQVESISISGQERE-KAESYSAKAVSGATVEV 1430
+S++I+ Q R+ + S +GATV+V
Sbjct: 616 -------------------------------DSLTIADQNRDANVGALSTTKGNGATVQV 644
Query: 1431 LNETSHVPGREYLDSELKFD-AVSKG----KVEQIKSSV-FPCNLSMSNSEQLKPLGINN 1592
L + + G +S K KG K+EQI+SSV P + + +SE+ +P +
Sbjct: 645 LKKPTGAFGALLGNSASKRKLGPDKGKEDSKLEQIRSSVSLPFHSFLGSSEKSEPT-VET 703
Query: 1593 QEIPSPKISNAMP----TGISNLEDIASL----GADLADQEPLQS 1703
+ S + + P +S L++I L GA+ +Q L+S
Sbjct: 704 HTVASEMLESQRPVSDVVSVSPLDEIIMLESGTGAENMEQNNLES 748