BLASTX nr result

ID: Coptis24_contig00003451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003451
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT84460.1| cytochrome b5 isoform Cb5-C [Vernicia fordii]          107   3e-44
emb|CAA50575.1| cytochrome b5 [Nicotiana tabacum]                     108   1e-43
ref|XP_002521096.1| cytochrome B5 isoform 1, putative [Ricinus c...   109   2e-43
ref|XP_004133998.1| PREDICTED: cytochrome b5 isoform B-like [Cuc...   110   3e-43
sp|P49098.1|CYB5_TOBAC RecName: Full=Cytochrome b5                    108   3e-43

>gb|AAT84460.1| cytochrome b5 isoform Cb5-C [Vernicia fordii]
          Length = 136

 Score =  107 bits (267), Expect(2) = 3e-44
 Identities = 49/65 (75%), Positives = 55/65 (84%)
 Frame = -2

Query: 475 RAMMDEYYVGDFDTSTIPSTHTYTPPKQPHYNQDKTSEFLIKLLQFFVPLAILGLAFAVR 296
           RAMMDE+YVG+ D+STIPS   YTPPKQPHYNQDKT EF+IK LQF VPL ILGLA  +R
Sbjct: 69  RAMMDEFYVGEIDSSTIPSRMAYTPPKQPHYNQDKTMEFIIKFLQFVVPLLILGLAVGIR 128

Query: 295 FYTKA 281
           FYTK+
Sbjct: 129 FYTKS 133



 Score = 98.2 bits (243), Expect(2) = 3e-44
 Identities = 45/49 (91%), Positives = 47/49 (95%)
 Frame = -1

Query: 710 MGSEGKVFTLAEVSEHDNSKDCWLVIDGKVYDVTKFLEDHPGGDEVLLS 564
           MGS GKVFTLAEVSEH+N KDCWLVI+GKVYDVTKFLEDHPGGDEVLLS
Sbjct: 1   MGSSGKVFTLAEVSEHNNPKDCWLVIEGKVYDVTKFLEDHPGGDEVLLS 49


>emb|CAA50575.1| cytochrome b5 [Nicotiana tabacum]
          Length = 139

 Score =  108 bits (271), Expect(2) = 1e-43
 Identities = 48/64 (75%), Positives = 56/64 (87%)
 Frame = -2

Query: 475 RAMMDEYYVGDFDTSTIPSTHTYTPPKQPHYNQDKTSEFLIKLLQFFVPLAILGLAFAVR 296
           RAM+DEYYVGD D++TIP+   YTPP QPHYNQDKTSEF++KLLQF VPL ILG+AF +R
Sbjct: 72  RAMLDEYYVGDIDSATIPTKTKYTPPNQPHYNQDKTSEFVVKLLQFLVPLIILGVAFGIR 131

Query: 295 FYTK 284
           FYTK
Sbjct: 132 FYTK 135



 Score = 94.4 bits (233), Expect(2) = 1e-43
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = -1

Query: 713 VMGSEGKVFTLAEVSEHDNSKDCWLVIDGKVYDVTKFLEDHPGGDEVLLS 564
           +MG E KVFTLAEVS+H+N+KDCWLVI GKVYDVTKFL+DHPGGDEVLLS
Sbjct: 3   IMGGETKVFTLAEVSQHNNAKDCWLVISGKVYDVTKFLDDHPGGDEVLLS 52


>ref|XP_002521096.1| cytochrome B5 isoform 1, putative [Ricinus communis]
           gi|223539665|gb|EEF41247.1| cytochrome B5 isoform 1,
           putative [Ricinus communis]
          Length = 136

 Score =  109 bits (273), Expect(2) = 2e-43
 Identities = 50/65 (76%), Positives = 56/65 (86%)
 Frame = -2

Query: 475 RAMMDEYYVGDFDTSTIPSTHTYTPPKQPHYNQDKTSEFLIKLLQFFVPLAILGLAFAVR 296
           RAMMDE+YVG+ DTSTIP+   YTPPKQPHYNQDKT EF+IKLLQF VPL ILGLA  +R
Sbjct: 69  RAMMDEFYVGEIDTSTIPTKKAYTPPKQPHYNQDKTPEFIIKLLQFVVPLLILGLAVGIR 128

Query: 295 FYTKA 281
           FYTK+
Sbjct: 129 FYTKS 133



 Score = 93.2 bits (230), Expect(2) = 2e-43
 Identities = 41/49 (83%), Positives = 47/49 (95%)
 Frame = -1

Query: 710 MGSEGKVFTLAEVSEHDNSKDCWLVIDGKVYDVTKFLEDHPGGDEVLLS 564
           MG +GKV+TLA+VSEH++ KDCWLVI+GKVYDVTKFLEDHPGGDEVLLS
Sbjct: 1   MGGQGKVYTLADVSEHNSPKDCWLVIEGKVYDVTKFLEDHPGGDEVLLS 49


>ref|XP_004133998.1| PREDICTED: cytochrome b5 isoform B-like [Cucumis sativus]
           gi|449526187|ref|XP_004170095.1| PREDICTED: cytochrome
           b5 isoform B-like [Cucumis sativus]
          Length = 201

 Score =  110 bits (276), Expect(2) = 3e-43
 Identities = 51/64 (79%), Positives = 56/64 (87%)
 Frame = -2

Query: 475 RAMMDEYYVGDFDTSTIPSTHTYTPPKQPHYNQDKTSEFLIKLLQFFVPLAILGLAFAVR 296
           R MMD+YYVG+ D+STIP    YTPPKQPHYNQDKTSEF+IKLLQF VPLAILGLA A+R
Sbjct: 136 REMMDQYYVGEIDSSTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIR 195

Query: 295 FYTK 284
           FYTK
Sbjct: 196 FYTK 199



 Score = 91.3 bits (225), Expect(2) = 3e-43
 Identities = 42/53 (79%), Positives = 46/53 (86%)
 Frame = -1

Query: 722 QEQVMGSEGKVFTLAEVSEHDNSKDCWLVIDGKVYDVTKFLEDHPGGDEVLLS 564
           Q  VMGS  KVFTL EV+EH+N KDCWL+I GKVYDVTKFLEDHPGGD+VLLS
Sbjct: 64  QFHVMGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLS 116


>sp|P49098.1|CYB5_TOBAC RecName: Full=Cytochrome b5
          Length = 136

 Score =  108 bits (271), Expect(2) = 3e-43
 Identities = 48/64 (75%), Positives = 56/64 (87%)
 Frame = -2

Query: 475 RAMMDEYYVGDFDTSTIPSTHTYTPPKQPHYNQDKTSEFLIKLLQFFVPLAILGLAFAVR 296
           RAM+DEYYVGD D++TIP+   YTPP QPHYNQDKTSEF++KLLQF VPL ILG+AF +R
Sbjct: 69  RAMLDEYYVGDIDSATIPTKTKYTPPNQPHYNQDKTSEFVVKLLQFLVPLIILGVAFGIR 128

Query: 295 FYTK 284
           FYTK
Sbjct: 129 FYTK 132



 Score = 93.2 bits (230), Expect(2) = 3e-43
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = -1

Query: 710 MGSEGKVFTLAEVSEHDNSKDCWLVIDGKVYDVTKFLEDHPGGDEVLLS 564
           MG E KVFTLAEVS+H+N+KDCWLVI GKVYDVTKFL+DHPGGDEVLLS
Sbjct: 1   MGGETKVFTLAEVSQHNNAKDCWLVISGKVYDVTKFLDDHPGGDEVLLS 49


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