BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003443
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi...   162   5e-42
ref|XP_002310592.1| predicted protein [Populus trichocarpa] gi|2...   169   5e-42
emb|CBI15551.3| unnamed protein product [Vitis vinifera]              162   5e-42
ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266...   175   9e-42
emb|CBI35955.3| unnamed protein product [Vitis vinifera]              175   9e-42

>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 766

 Score =  162 bits (411), Expect(2) = 5e-42
 Identities = 87/211 (41%), Positives = 126/211 (59%), Gaps = 5/211 (2%)
 Frame = +3

Query: 3    LFKSVTNKNVVTWTTMIMGYGMHGLSREALRLFDEMTKFGIRPDSITFIALLSACSHGKL 182
            +F+ +  K VV+W TMI GY  HG  +EAL LF+ M K GI PD +T + +LSACSH  L
Sbjct: 451  VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 510

Query: 183  VEEGKKFYLSMQRDYNIDPEMKHFGCMVDLYGRAGLLEEAHNFIESMPVEPTEFIWAALL 362
            V++G +++ SM +DY I    KH+ CM+DL GRAG L++A N +++MP EP    W ALL
Sbjct: 511  VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570

Query: 363  SSCRIYKNLDLGEKAA-----IEALILNQHTLVTNIRRFRTTEGSE*GDRF*KIWV*TLK 527
             + RI+ N +LGEKAA     +E      + L++N+       G + G    ++    +K
Sbjct: 571  GASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWG-DVGRMRLRMRDRGVK 629

Query: 528  PATARSWVEVERTLYTFTVKHRVNS*ADKIY 620
                 SWVEV+  ++TFTV   V+   D+IY
Sbjct: 630  KVPGYSWVEVQNKIHTFTVGDSVHPERDRIY 660



 Score = 35.0 bits (79), Expect(2) = 5e-42
 Identities = 17/41 (41%), Positives = 29/41 (70%)
 Frame = +2

Query: 644 RMGKVGYVSNSSGVGHHISEEEKQNDVYGYTEKLALSFVLI 766
           +M K GYVS++  V H + EEEK + +  ++EKLA++F ++
Sbjct: 669 KMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGIL 709


>ref|XP_002310592.1| predicted protein [Populus trichocarpa] gi|222853495|gb|EEE91042.1|
            predicted protein [Populus trichocarpa]
          Length = 747

 Score =  169 bits (428), Expect(2) = 5e-42
 Identities = 83/214 (38%), Positives = 135/214 (63%), Gaps = 6/214 (2%)
 Frame = +3

Query: 21   NKNVVTWTTMIMGYGMHGLSREALRLFDEMTKFGIRPDSITFIALLSACSHGKLVEEGKK 200
            N++ V+WT+MIM    HGL  EA+ LF++M   GI+PD IT++ +LSAC+HG LVE+G+ 
Sbjct: 438  NRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRS 497

Query: 201  FYLSMQRDYNIDPEMKHFGCMVDLYGRAGLLEEAHNFIESMPVEPTEFIWAALLSSCRIY 380
            ++  M+  + IDP + H+ CMVDL+GRAGLL+EA+ F+E+MP+EP    W +LLSSC++Y
Sbjct: 498  YFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVY 557

Query: 381  KNLDLGEKAAIEALIL-----NQHTLVTNIRRFRTTEGSE*GDRF*KIW-V*TLKPATAR 542
            KN+DL + AA   L++       ++ + N+  + +    +   +  K+     +K     
Sbjct: 558  KNVDLAKVAAERLLLIEPNNSGAYSALANV--YSSCGKWDDAAKIRKLMKARGVKKEQGL 615

Query: 543  SWVEVERTLYTFTVKHRVNS*ADKIYGLSDPIKK 644
            SWV+++   + F V+  ++   D+IY + D I K
Sbjct: 616  SWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWK 649



 Score = 28.5 bits (62), Expect(2) = 5e-42
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +2

Query: 641 KRMGKVGYVSNSSGVGHHISEEEKQNDVYGYTEKLALSFVLIKCLTN 781
           K + K+G+  ++  V H +  E K   +  ++EKLA++F +I    N
Sbjct: 649 KEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPEN 695



 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
 Frame = +3

Query: 3   LFKSVTNKNVVTWTTMIMGYGMHGLSREALRLFDEMTKFGIRPDSITFIALLSACSHGKL 182
           +F S+ + +VV WT MI+GY  +GL+ +A+ +F  M   G RP+S T  A+LSA S    
Sbjct: 330 IFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTS 389

Query: 183 VEEGKKFYLSMQRDYN-IDPEMKHFGCMVDLYGRAGLLEEAHNFIESMPVEPTEFIWAAL 359
           +  GK+ + S  R    + P + +   +  +Y +AG +  A      +        W ++
Sbjct: 390 LNHGKQIHASAIRSGEALSPSVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSM 447

Query: 360 LSSCRIYKNLDLGEKA 407
           + +   +    LGE+A
Sbjct: 448 IMALAQH---GLGEEA 460


>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  162 bits (411), Expect(2) = 5e-42
 Identities = 87/211 (41%), Positives = 126/211 (59%), Gaps = 5/211 (2%)
 Frame = +3

Query: 3   LFKSVTNKNVVTWTTMIMGYGMHGLSREALRLFDEMTKFGIRPDSITFIALLSACSHGKL 182
           +F+ +  K VV+W TMI GY  HG  +EAL LF+ M K GI PD +T + +LSACSH  L
Sbjct: 370 VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 429

Query: 183 VEEGKKFYLSMQRDYNIDPEMKHFGCMVDLYGRAGLLEEAHNFIESMPVEPTEFIWAALL 362
           V++G +++ SM +DY I    KH+ CM+DL GRAG L++A N +++MP EP    W ALL
Sbjct: 430 VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 489

Query: 363 SSCRIYKNLDLGEKAA-----IEALILNQHTLVTNIRRFRTTEGSE*GDRF*KIWV*TLK 527
            + RI+ N +LGEKAA     +E      + L++N+       G + G    ++    +K
Sbjct: 490 GASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWG-DVGRMRLRMRDRGVK 548

Query: 528 PATARSWVEVERTLYTFTVKHRVNS*ADKIY 620
                SWVEV+  ++TFTV   V+   D+IY
Sbjct: 549 KVPGYSWVEVQNKIHTFTVGDSVHPERDRIY 579



 Score = 35.0 bits (79), Expect(2) = 5e-42
 Identities = 17/41 (41%), Positives = 29/41 (70%)
 Frame = +2

Query: 644 RMGKVGYVSNSSGVGHHISEEEKQNDVYGYTEKLALSFVLI 766
           +M K GYVS++  V H + EEEK + +  ++EKLA++F ++
Sbjct: 588 KMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGIL 628


>ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
          Length = 1753

 Score =  175 bits (444), Expect = 9e-42
 Identities = 84/213 (39%), Positives = 137/213 (64%), Gaps = 7/213 (3%)
 Frame = +3

Query: 3    LFKSVTNKNVVTWTTMIMGYGMHGLSREALRLFDEMTKFGIRPDSITFIALLSACSHGKL 182
            +F+ + NK++++W TM+ GYG+HGL   A+R FD+M K G  PD +TF+A+LSACSH  L
Sbjct: 1306 VFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGL 1365

Query: 183  VEEGKKFYLSMQRDYNIDPEMKHFGCMVDLYGRAGLLEEAHNFIESMPVEPTEFIWAALL 362
            V EG++ +  M +++ ++P+M+H+ CMVDL GRAGLL+EA   ++SMPVEP   +W ALL
Sbjct: 1366 VAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALL 1425

Query: 363  SSCRIYKNLDLGEKAAIEALILN-----QHTLVTNIRRFRTTEGSE*GDRF*KIWV*T-- 521
            +SCR++KN ++ E+ A +   LN      + L++NI       G        +I   T  
Sbjct: 1426 NSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNI---YAASGRWEDSAKVRISAKTKG 1482

Query: 522  LKPATARSWVEVERTLYTFTVKHRVNS*ADKIY 620
            LK    +SW++V++ +Y F+  +  ++  +++Y
Sbjct: 1483 LKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVY 1515


>emb|CBI35955.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  175 bits (444), Expect = 9e-42
 Identities = 84/213 (39%), Positives = 137/213 (64%), Gaps = 7/213 (3%)
 Frame = +3

Query: 3    LFKSVTNKNVVTWTTMIMGYGMHGLSREALRLFDEMTKFGIRPDSITFIALLSACSHGKL 182
            +F+ + NK++++W TM+ GYG+HGL   A+R FD+M K G  PD +TF+A+LSACSH  L
Sbjct: 468  VFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGL 527

Query: 183  VEEGKKFYLSMQRDYNIDPEMKHFGCMVDLYGRAGLLEEAHNFIESMPVEPTEFIWAALL 362
            V EG++ +  M +++ ++P+M+H+ CMVDL GRAGLL+EA   ++SMPVEP   +W ALL
Sbjct: 528  VAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALL 587

Query: 363  SSCRIYKNLDLGEKAAIEALILN-----QHTLVTNIRRFRTTEGSE*GDRF*KIWV*T-- 521
            +SCR++KN ++ E+ A +   LN      + L++NI       G        +I   T  
Sbjct: 588  NSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNI---YAASGRWEDSAKVRISAKTKG 644

Query: 522  LKPATARSWVEVERTLYTFTVKHRVNS*ADKIY 620
            LK    +SW++V++ +Y F+  +  ++  +++Y
Sbjct: 645  LKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVY 677