BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003442
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316240.1| predicted protein [Populus trichocarpa] gi|1...   217   2e-54
ref|XP_002277272.1| PREDICTED: 60S ribosomal protein L35a-1-like...   217   2e-54
gb|ADR71255.1| 60S ribosomal protein L35aA [Hevea brasiliensis]       216   3e-54
gb|ACJ02349.1| 60S ribosomal protein L35a [Vernicia fordii]           216   5e-54
ref|XP_002312115.1| predicted protein [Populus trichocarpa] gi|1...   215   8e-54

>ref|XP_002316240.1| predicted protein [Populus trichocarpa] gi|118482276|gb|ABK93065.1|
           unknown [Populus trichocarpa]
           gi|222865280|gb|EEF02411.1| predicted protein [Populus
           trichocarpa]
          Length = 112

 Score =  217 bits (553), Expect = 2e-54
 Identities = 100/111 (90%), Positives = 106/111 (95%)
 Frame = -2

Query: 676 MKSRQGERIRLYTRGTVLGYKRSKSNQYPNTSLVQIEGVNTKEEVAWYCGKRLGYIYKAK 497
           +K RQGER+RLY RGT+LGYKRSKSNQYPNTSLVQ+EGVNTKEEVAWY GKR+ YIYKAK
Sbjct: 2   VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTKEEVAWYAGKRMAYIYKAK 61

Query: 496 VKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 344
           VKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 62  VKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112


>ref|XP_002277272.1| PREDICTED: 60S ribosomal protein L35a-1-like isoform 1 [Vitis
           vinifera] gi|225449234|ref|XP_002280039.1| PREDICTED:
           60S ribosomal protein L35a-1 [Vitis vinifera]
           gi|359481695|ref|XP_003632660.1| PREDICTED: 60S
           ribosomal protein L35a-1-like isoform 2 [Vitis vinifera]
           gi|147823354|emb|CAN64195.1| hypothetical protein
           VITISV_014336 [Vitis vinifera]
           gi|296086107|emb|CBI31548.3| unnamed protein product
           [Vitis vinifera] gi|297740261|emb|CBI30443.3| unnamed
           protein product [Vitis vinifera]
          Length = 112

 Score =  217 bits (553), Expect = 2e-54
 Identities = 99/111 (89%), Positives = 107/111 (96%)
 Frame = -2

Query: 676 MKSRQGERIRLYTRGTVLGYKRSKSNQYPNTSLVQIEGVNTKEEVAWYCGKRLGYIYKAK 497
           +K RQGER+RLY RGT+LGYKRSKSNQYPNTSL+QIEGVNTKEEVAWYCGKR+ YIYKAK
Sbjct: 2   VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKAK 61

Query: 496 VKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 344
           VKK+GSH+RCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 62  VKKDGSHFRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112


>gb|ADR71255.1| 60S ribosomal protein L35aA [Hevea brasiliensis]
          Length = 112

 Score =  216 bits (551), Expect = 3e-54
 Identities = 100/111 (90%), Positives = 106/111 (95%)
 Frame = -2

Query: 676 MKSRQGERIRLYTRGTVLGYKRSKSNQYPNTSLVQIEGVNTKEEVAWYCGKRLGYIYKAK 497
           +K RQGER+RLY RGT+LGYKRSKSNQYPNTSL+QIEGVNTKEEVAWY GKR+ YIYKAK
Sbjct: 2   VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKAK 61

Query: 496 VKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 344
           VKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 62  VKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112


>gb|ACJ02349.1| 60S ribosomal protein L35a [Vernicia fordii]
          Length = 112

 Score =  216 bits (549), Expect = 5e-54
 Identities = 99/111 (89%), Positives = 105/111 (94%)
 Frame = -2

Query: 676 MKSRQGERIRLYTRGTVLGYKRSKSNQYPNTSLVQIEGVNTKEEVAWYCGKRLGYIYKAK 497
           +K RQGER+RLY RGT+LGYKRSKSNQYPNTSL+QIEGVNTKEEV WY GKR+ YIYKAK
Sbjct: 2   VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVGWYAGKRMAYIYKAK 61

Query: 496 VKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 344
           VKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 62  VKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112


>ref|XP_002312115.1| predicted protein [Populus trichocarpa] gi|118488215|gb|ABK95927.1|
           unknown [Populus trichocarpa]
           gi|222851935|gb|EEE89482.1| predicted protein [Populus
           trichocarpa]
          Length = 112

 Score =  215 bits (547), Expect = 8e-54
 Identities = 99/111 (89%), Positives = 105/111 (94%)
 Frame = -2

Query: 676 MKSRQGERIRLYTRGTVLGYKRSKSNQYPNTSLVQIEGVNTKEEVAWYCGKRLGYIYKAK 497
           +K RQGER+RLY RGT+LGYKRSKSNQYPNTSL+QIEGVNTKEEVAWY GKR+ YIYKAK
Sbjct: 2   VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKAK 61

Query: 496 VKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 344
           VKK GSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 62  VKKQGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGTRVRVFMYPSNI 112