BLASTX nr result
ID: Coptis24_contig00003437
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003437
(1975 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316445.1| predicted protein [Populus trichocarpa] gi|2... 533 e-149
ref|XP_002528288.1| conserved hypothetical protein [Ricinus comm... 524 e-146
ref|XP_002275416.1| PREDICTED: uncharacterized protein LOC100250... 520 e-145
gb|ABK93128.1| unknown [Populus trichocarpa] 516 e-144
ref|XP_002266604.1| PREDICTED: DUF246 domain-containing protein ... 499 e-139
>ref|XP_002316445.1| predicted protein [Populus trichocarpa] gi|222865485|gb|EEF02616.1|
predicted protein [Populus trichocarpa]
Length = 420
Score = 533 bits (1374), Expect = e-149
Identities = 268/421 (63%), Positives = 326/421 (77%), Gaps = 3/421 (0%)
Frame = +2
Query: 359 MAMDAKQVLGAFLTLTMFTMLINMIKKDHFDSVEVVRIPDFSAVQFDAIKVTEKSLVSLP 538
M +D +QV+ LTLTMF ML NMIK+DHFDSVE + P V+FD KV+E+ LV+
Sbjct: 1 MGVDLRQVVAGVLTLTMFVMLGNMIKRDHFDSVEG-KFPGARDVEFDGEKVSEQGLVTFS 59
Query: 539 RFSKE-PWKEDGLKLKSCWTRPGHKAKSSKGFIIFSLTNGPEYHISQIANTVVIARHLGA 715
+ S PW E GL+LK CW SKGF+ FSLTNGPEYH+SQIA+ VV+AR++GA
Sbjct: 60 KKSTNGPWVEGGLELKPCWKESNFDDVESKGFVTFSLTNGPEYHVSQIADAVVVARYIGA 119
Query: 716 TLVLPDIRGSNPGETRYFQEIYDLEKFVKSLDGVVELVKHWPEELSNQEIAVVRVPNRIT 895
TLVLPDIRG+ PG+ R F+EIYD+EKFVKSL GVV++VK PE++S ++ AVV+VPNR++
Sbjct: 120 TLVLPDIRGNKPGDERKFEEIYDVEKFVKSLVGVVKVVKRLPEDVSIRDFAVVKVPNRVS 179
Query: 896 ENHIVEHVEPIFREKGSLRLATYFPSINMRQTEKKRV-DSIACLATYGSLELQPEVHEVV 1072
E+HI E +EP+FR ++RLAT+FPS+NMR+T K DS+ACLA +G+LELQPEV+EVV
Sbjct: 180 EDHIAEQIEPVFRTNSNIRLATFFPSVNMRKTTKTSASDSVACLAMFGTLELQPEVNEVV 239
Query: 1073 DSMIERLRTLSRKSDGQFIAVDLRMDILEKKGCQREGGTGTKSCYGPLEIGVFLRNIGFG 1252
DSMIERLRTLSRKSDG+FIAVDLR++IL+KKGC TGTKSC+ EI +FLR IGFG
Sbjct: 240 DSMIERLRTLSRKSDGRFIAVDLRVEILDKKGCHGSSATGTKSCFSAQEIAIFLRKIGFG 299
Query: 1253 RDTTIYLTQSRWHSSLDALKGIFPKTFTKEGIMPADKKGKFLKSGSSDFEKALDFHICSH 1432
+DTTIYLTQ RW SLD LK IFPKT+TKE I+PADKK KFL+S S+FEK +DF++CS
Sbjct: 300 KDTTIYLTQPRWDESLDVLKDIFPKTYTKESILPADKKAKFLESEDSEFEKVIDFYMCSQ 359
Query: 1433 SDVFVPAISGLFYANVAGKRIASGKTQIFVPAAVT-XXXXXXXXXXXXXXKKNHLAHSCF 1609
SDVFVPAISGLFYANVAGKRIASGKTQI VPA + KKNH+AHSCF
Sbjct: 360 SDVFVPAISGLFYANVAGKRIASGKTQILVPADIPGTSSSVTNHFSPYISKKNHMAHSCF 419
Query: 1610 C 1612
C
Sbjct: 420 C 420
>ref|XP_002528288.1| conserved hypothetical protein [Ricinus communis]
gi|223532288|gb|EEF34090.1| conserved hypothetical
protein [Ricinus communis]
Length = 421
Score = 524 bits (1349), Expect = e-146
Identities = 262/421 (62%), Positives = 328/421 (77%), Gaps = 3/421 (0%)
Frame = +2
Query: 359 MAMDAKQVLGAFLTLTMFTMLINMIKKDHFDSVEVVRIPDFSAVQFDAIKVTEKSLVSLP 538
M +D +QV+ LTLTMF ML NMIK+DHFDSVE + V+FD+ KVTE LV+
Sbjct: 1 MGVDLRQVIAGILTLTMFVMLGNMIKRDHFDSVEEKFPGGATDVEFDSGKVTEHGLVTFA 60
Query: 539 RFSKEPWKEDGLKLKSCWTRPGH-KAKSSKGFIIFSLTNGPEYHISQIANTVVIARHLGA 715
+ + PW ED +LK CW++ + + SKGF+ FSLTNGPEYHISQIA+ VV+AR+LGA
Sbjct: 61 KSTNGPWIEDAQELKPCWSKSNFDEVEQSKGFVTFSLTNGPEYHISQIADAVVVARYLGA 120
Query: 716 TLVLPDIRGSNPGETRYFQEIYDLEKFVKSLDGVVELVKHWPEELSNQEIAVVRVPNRIT 895
T+VLPDIRG+ PG+ R F+EIYD+EKFV+SLDGVV++VK+ P+++S ++ AVV+VPNR+T
Sbjct: 121 TIVLPDIRGNKPGDERKFEEIYDVEKFVQSLDGVVKVVKYLPDDISIRDFAVVKVPNRVT 180
Query: 896 ENHIVEHVEPIFREKGSLRLATYFPSINMRQT-EKKRVDSIACLATYGSLELQPEVHEVV 1072
E+HI + +E IF+ KG++RLATYFPS+NMR+T +K DS+ACLA +GSLELQP+++EVV
Sbjct: 181 EDHISKSIEQIFKRKGNIRLATYFPSVNMRKTAQKSSSDSVACLAMFGSLELQPDINEVV 240
Query: 1073 DSMIERLRTLSRKSDGQFIAVDLRMDILEKKGCQREGGTGTKSCYGPLEIGVFLRNIGFG 1252
DSMIERLRTLSRKS G+FI+VDLR++ILEKK C GG G K+CY EI +FLR IGF
Sbjct: 241 DSMIERLRTLSRKSGGRFISVDLRVEILEKKSCHGSGGGGAKTCYSAQEIALFLRKIGFD 300
Query: 1253 RDTTIYLTQSRWHSSLDALKGIFPKTFTKEGIMPADKKGKFLKSGSSDFEKALDFHICSH 1432
+DT IYLTQSRW SL+ LK IFPKT+TKE IMP DKK KFL+S S+FEK +DF++CS
Sbjct: 301 KDTAIYLTQSRWDDSLNVLKDIFPKTYTKESIMPEDKKTKFLQSEDSEFEKVIDFYMCSQ 360
Query: 1433 SDVFVPAISGLFYANVAGKRIASGKTQIFVPAAVT-XXXXXXXXXXXXXXKKNHLAHSCF 1609
SDVFVPAISGLFYANVAGKRIA+GKTQI VPA + KKNHLA+SCF
Sbjct: 361 SDVFVPAISGLFYANVAGKRIAAGKTQILVPADIPGSSASVTNHFSPYISKKNHLAYSCF 420
Query: 1610 C 1612
C
Sbjct: 421 C 421
>ref|XP_002275416.1| PREDICTED: uncharacterized protein LOC100250173 [Vitis vinifera]
gi|298204801|emb|CBI25299.3| unnamed protein product
[Vitis vinifera]
Length = 417
Score = 520 bits (1340), Expect = e-145
Identities = 266/423 (62%), Positives = 325/423 (76%), Gaps = 5/423 (1%)
Frame = +2
Query: 359 MAMDAKQVLGAFLTLTMFTMLINMIKKDHFDSVEVVRIPDFSAVQFDAIKVTEKSLVSLP 538
M +D +Q+L FLT+TMF ML NMIK++HFDSV+ P + ++ D E+SL LP
Sbjct: 1 MGVDPRQILAGFLTVTMFVMLANMIKREHFDSVKT---PAAANIRLDENPAVEQSLAKLP 57
Query: 539 RFSKE-PWKEDGLK-LKSCWTRP--GHKAKSSKGFIIFSLTNGPEYHISQIANTVVIARH 706
+ PWKED + LK CW +P G+ KS+ GF+ FSLTNGPEYH+SQIA+ VV+AR+
Sbjct: 58 GGTTTGPWKEDEWQELKPCWAKPDLGNSEKST-GFVTFSLTNGPEYHVSQIADAVVVARY 116
Query: 707 LGATLVLPDIRGSNPGETRYFQEIYDLEKFVKSLDGVVELVKHWPEELSNQEIAVVRVPN 886
LGATLV+PDIRGS G+ R F+EIYD+EKF+KSL+GVV + K P ELS Q IAVVRVPN
Sbjct: 117 LGATLVVPDIRGSKRGDKRDFEEIYDVEKFMKSLEGVVRVTKDQPAELSAQNIAVVRVPN 176
Query: 887 RITENHIVEHVEPIFREKGSLRLATYFPSINMRQTEKKRVDSIACLATYGSLELQPEVHE 1066
R+TE H+ E++ PIFR KG++RLATYFPS+NM++ K + DS+ACLA +G+LELQPEV E
Sbjct: 177 RVTEEHVEEYIAPIFRTKGNVRLATYFPSVNMKEITKSKADSVACLAMFGALELQPEVRE 236
Query: 1067 VVDSMIERLRTLSRKSDGQFIAVDLRMDILEKKGCQREGGTGTKSCYGPLEIGVFLRNIG 1246
VVDSM+ERLRTLSRKSDGQFIAVDLR++ILEKKGC GG GTK+CYGP EI FL+ IG
Sbjct: 237 VVDSMVERLRTLSRKSDGQFIAVDLRVEILEKKGCL--GGDGTKTCYGPDEISAFLQKIG 294
Query: 1247 FGRDTTIYLTQSRWHSSLDALKGIFPKTFTKEGIMPADKKGKFLKSGSSDFEKALDFHIC 1426
F +D T+YLTQ+RWH SLD+LK FPKT+ KE IMPADKK KFL S +S+F K +DF+IC
Sbjct: 295 FDKDATVYLTQTRWHGSLDSLKESFPKTYIKENIMPADKKPKFLDSETSEFMKVIDFYIC 354
Query: 1427 SHSDVFVPAISGLFYANVAGKRIASGKTQIFVPAAVT-XXXXXXXXXXXXXXKKNHLAHS 1603
S SDVFVPAISGLFYANVAGKRIA+GK QI VPA ++ KKNHLA+S
Sbjct: 355 SQSDVFVPAISGLFYANVAGKRIATGKNQILVPATISEATASASDFISSYISKKNHLAYS 414
Query: 1604 CFC 1612
CFC
Sbjct: 415 CFC 417
>gb|ABK93128.1| unknown [Populus trichocarpa]
Length = 421
Score = 516 bits (1329), Expect = e-144
Identities = 258/421 (61%), Positives = 323/421 (76%), Gaps = 3/421 (0%)
Frame = +2
Query: 359 MAMDAKQVLGAFLTLTMFTMLINMIKKDHFDSVEVVRIPDFSAVQFDAIKVTEKSLVSLP 538
M +D +QV+ LTLTMF ML NMIK+DHFDSVE + P V+FD+ KV+++ LV+
Sbjct: 1 MGVDLRQVVAGVLTLTMFVMLGNMIKRDHFDSVEG-KFPGVRDVEFDSEKVSDQGLVTFS 59
Query: 539 RFSKE-PWKEDGLKLKSCWTRPGHKAKSSKGFIIFSLTNGPEYHISQIANTVVIARHLGA 715
+ S PW E G +LK CW KGF+ SLTNGPEYH+SQIA+ VV+AR++GA
Sbjct: 60 KKSTNGPWIESGQELKPCWKESTLDEVEPKGFVTLSLTNGPEYHVSQIADAVVVARYIGA 119
Query: 716 TLVLPDIRGSNPGETRYFQEIYDLEKFVKSLDGVVELVKHWPEELSNQEIAVVRVPNRIT 895
TLVLPDIRGS PG+ R F+EIYD++KFVKSLDGVV++VK P+++S ++ AVV+VPNRI+
Sbjct: 120 TLVLPDIRGSKPGDERKFEEIYDVDKFVKSLDGVVKVVKGLPDDVSIRDFAVVKVPNRIS 179
Query: 896 ENHIVEHVEPIFREKGSLRLATYFPSINMRQTEKKRV-DSIACLATYGSLELQPEVHEVV 1072
++HI E ++P+F+ ++RLAT+FPS+NMR+T K DS+ACLA +G+L+LQPEV+EVV
Sbjct: 180 DDHIAEQIKPVFKTNSNIRLATFFPSVNMRKTTKTSASDSVACLAMFGTLQLQPEVNEVV 239
Query: 1073 DSMIERLRTLSRKSDGQFIAVDLRMDILEKKGCQREGGTGTKSCYGPLEIGVFLRNIGFG 1252
DSMIERLRTLSRKS+GQFIAVDLR++ILEKKGC GTKSC+ EI +FLR +GF
Sbjct: 240 DSMIERLRTLSRKSNGQFIAVDLRVEILEKKGCHGSSSAGTKSCFSAQEIAIFLRKMGFD 299
Query: 1253 RDTTIYLTQSRWHSSLDALKGIFPKTFTKEGIMPADKKGKFLKSGSSDFEKALDFHICSH 1432
+DTTIYLTQ RW SLD LK IFPKT+TKE IMPADKK KFL+S S+FEK +DF++CS
Sbjct: 300 KDTTIYLTQPRWDESLDVLKDIFPKTYTKESIMPADKKAKFLESEDSEFEKVIDFYMCSQ 359
Query: 1433 SDVFVPAISGLFYANVAGKRIASGKTQIFVPAAVT-XXXXXXXXXXXXXXKKNHLAHSCF 1609
SDVFVPAISGLFYANVAGKRIASGKTQI VP+ + KKNH+AHSC+
Sbjct: 360 SDVFVPAISGLFYANVAGKRIASGKTQILVPSDIPGSSAAVTSHFSPYISKKNHMAHSCY 419
Query: 1610 C 1612
C
Sbjct: 420 C 420
>ref|XP_002266604.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
vinifera]
Length = 418
Score = 499 bits (1286), Expect = e-139
Identities = 252/420 (60%), Positives = 315/420 (75%), Gaps = 2/420 (0%)
Frame = +2
Query: 359 MAMDAKQVLGAFLTLTMFTMLINMIKKDHFDSVEVVRIPDFSAVQFDAIKVTEKSLVSLP 538
MAMDA+QV+ A LTL+MF ML NMIKKDHFD+ ++ + P S VQ+D IK+ EK+++ LP
Sbjct: 1 MAMDARQVIAAILTLSMFAMLGNMIKKDHFDTFQM-KFPATSHVQYDTIKIAEKNIIDLP 59
Query: 539 RFSKEPWKEDGLKLKSCWTRPGHKAKSSKGFIIFSLTNGPEYHISQIANTVVIARHLGAT 718
+ PWK D LK CW +P + S GFI FS +NGPEYH+SQ+A+ VVIAR+LGAT
Sbjct: 60 TIRRGPWKNDSEALKPCWNKPALGIEQSTGFITFSFSNGPEYHVSQLADAVVIARYLGAT 119
Query: 719 LVLPDIRGSNPGETRYFQEIYDLEKFVKSLDGVVELVKHWPEELSNQEIAVVRVPNRITE 898
LVLPDIR S G+ R F+EIYD +K VK+L VV + P + S ++ VVRVPNR++E
Sbjct: 120 LVLPDIRKSERGQKRKFEEIYDAKKCVKNLGSVVRVALDQPSQASTGKLTVVRVPNRVSE 179
Query: 899 NHIVEHVEPIFREKGSLRLATYFPSINMRQTEK-KRVDSIACLATYGSLELQPEVHEVVD 1075
+I +EP+FR KG+LRL+TYFPS++MR+ E+ K +DS ACLA +G+L+LQPE+ EVVD
Sbjct: 180 EYIAAKIEPVFRTKGNLRLSTYFPSLDMRRAEETKYLDSFACLAMFGTLQLQPELQEVVD 239
Query: 1076 SMIERLRTLSRKSDGQFIAVDLRMDILEKKGCQREGGTGTKSCYGPLEIGVFLRNIGFGR 1255
SM+ RLR SRKS+GQF+AVDLR +LE++ C+R G K+CY EIGVFL+ IGF R
Sbjct: 240 SMVGRLRNSSRKSNGQFVAVDLRFKVLERE-CRRREAKGKKNCYNAEEIGVFLKKIGFDR 298
Query: 1256 DTTIYLTQSRWHSSLDALKGIFPKTFTKEGIMPADKKGKFLKSGSSDFEKALDFHICSHS 1435
DT IYLTQS+WH SLDAL+ IFPKTFTKEGIM A+KK KFL S SS+FEKA+DF+ICS S
Sbjct: 299 DTAIYLTQSKWHHSLDALREIFPKTFTKEGIMLAEKKAKFLSSESSEFEKAIDFYICSES 358
Query: 1436 DVFVPAISGLFYANVAGKRIASGKTQIFVPAAVT-XXXXXXXXXXXXXXKKNHLAHSCFC 1612
DVFVP+ISGLFYANV GKRIASGK+QI VPA VT K+NH A+SCFC
Sbjct: 359 DVFVPSISGLFYANVVGKRIASGKSQILVPAQVTVSSTSVSSYISRYISKRNHFAYSCFC 418