BLASTX nr result

ID: Coptis24_contig00003425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003425
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565570.1| selenium binding protein [Arabidopsis thaliana]...   130   5e-28
ref|XP_002869331.1| hypothetical protein ARALYDRAFT_913334 [Arab...   128   2e-27
ref|XP_002878754.1| hypothetical protein ARALYDRAFT_481300 [Arab...   127   5e-27
ref|XP_002282811.1| PREDICTED: uncharacterized protein LOC100261...   126   9e-27
emb|CAN66162.1| hypothetical protein VITISV_008125 [Vitis vinifera]   126   1e-26

>ref|NP_565570.1| selenium binding protein [Arabidopsis thaliana]
           gi|4337201|gb|AAD18115.1| expressed protein [Arabidopsis
           thaliana] gi|21553632|gb|AAM62725.1| unknown
           [Arabidopsis thaliana] gi|21805670|gb|AAM76749.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|50058859|gb|AAT69174.1| hypothetical protein
           At2g24440 [Arabidopsis thaliana]
           gi|330252484|gb|AEC07578.1| selenium binding protein
           [Arabidopsis thaliana]
          Length = 183

 Score =  130 bits (328), Expect = 5e-28
 Identities = 61/96 (63%), Positives = 75/96 (78%)
 Frame = -1

Query: 588 ASSAEFASADAKKIIIEHCKSCQSFKVRATRVKDGLENTFPGIKVLLNPEKPRRGCFEVR 409
           A   E   +D KKI+IEHCK C+SFK RA  VK+GLE   PGI V +NP+KPRRGCFE+R
Sbjct: 87  AEKEEDDDSDKKKIVIEHCKQCKSFKERANEVKEGLEEAVPGIIVTVNPDKPRRGCFEIR 146

Query: 408 EEGAEPLFSLLDLKRPFTPMKDLDMEEVISNIVKKL 301
           EEG E   SLL +KRPFTPMK+L+MEEVI++IV+K+
Sbjct: 147 EEGGETFISLLAMKRPFTPMKELNMEEVIADIVEKI 182


>ref|XP_002869331.1| hypothetical protein ARALYDRAFT_913334 [Arabidopsis lyrata subsp.
           lyrata] gi|297315167|gb|EFH45590.1| hypothetical protein
           ARALYDRAFT_913334 [Arabidopsis lyrata subsp. lyrata]
          Length = 179

 Score =  128 bits (322), Expect = 2e-27
 Identities = 57/84 (67%), Positives = 68/84 (80%)
 Frame = -1

Query: 552 KIIIEHCKSCQSFKVRATRVKDGLENTFPGIKVLLNPEKPRRGCFEVREEGAEPLFSLLD 373
           KI+IEHCK C +FK RA +VK+GLE   PG+ V LNPEKPRRGCFE+REEG E   SLL+
Sbjct: 95  KIVIEHCKQCNAFKTRAIQVKEGLEGAVPGVNVTLNPEKPRRGCFEIREEGGETFISLLE 154

Query: 372 LKRPFTPMKDLDMEEVISNIVKKL 301
           +KRPF PMK LDMEEVI +I+KK+
Sbjct: 155 MKRPFAPMKALDMEEVIEDIIKKI 178


>ref|XP_002878754.1| hypothetical protein ARALYDRAFT_481300 [Arabidopsis lyrata subsp.
           lyrata] gi|297324593|gb|EFH55013.1| hypothetical protein
           ARALYDRAFT_481300 [Arabidopsis lyrata subsp. lyrata]
          Length = 197

 Score =  127 bits (319), Expect = 5e-27
 Identities = 57/88 (64%), Positives = 73/88 (82%)
 Frame = -1

Query: 564 ADAKKIIIEHCKSCQSFKVRATRVKDGLENTFPGIKVLLNPEKPRRGCFEVREEGAEPLF 385
           ++ KKI+IEHCK C+SF+ RA  VK+GLE   PGI V +NP+KPRRGCFE+REEG E   
Sbjct: 109 SEKKKIVIEHCKQCKSFRERANEVKEGLEEAVPGIIVTVNPDKPRRGCFEIREEGGETFI 168

Query: 384 SLLDLKRPFTPMKDLDMEEVISNIVKKL 301
           SLL +KRPFTPMK+L+MEEVI++IV+K+
Sbjct: 169 SLLGMKRPFTPMKELNMEEVITDIVEKI 196


>ref|XP_002282811.1| PREDICTED: uncharacterized protein LOC100261165 [Vitis vinifera]
           gi|296081772|emb|CBI20777.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score =  126 bits (317), Expect = 9e-27
 Identities = 58/86 (67%), Positives = 70/86 (81%)
 Frame = -1

Query: 558 AKKIIIEHCKSCQSFKVRATRVKDGLENTFPGIKVLLNPEKPRRGCFEVREEGAEPLFSL 379
           +K I+IEHCK C SFK RAT+VKDGLE    GI V++NPEKPRRGCFE+REEG E   SL
Sbjct: 68  SKTIVIEHCKQCNSFKTRATQVKDGLEKGVLGITVVVNPEKPRRGCFEIREEGGEKFISL 127

Query: 378 LDLKRPFTPMKDLDMEEVISNIVKKL 301
           LD+KRPF PMK LDM++VIS+I+ K+
Sbjct: 128 LDMKRPFAPMKALDMDKVISDIIDKI 153


>emb|CAN66162.1| hypothetical protein VITISV_008125 [Vitis vinifera]
          Length = 154

 Score =  126 bits (316), Expect = 1e-26
 Identities = 58/86 (67%), Positives = 70/86 (81%)
 Frame = -1

Query: 558 AKKIIIEHCKSCQSFKVRATRVKDGLENTFPGIKVLLNPEKPRRGCFEVREEGAEPLFSL 379
           +K I+IEHCK C SFK RAT+VKDGLE    GI V++NPEKPRRGCFE+REEG E   SL
Sbjct: 68  SKTIVIEHCKQCNSFKTRATQVKDGLEKGVLGITVVVNPEKPRRGCFEIREEGGEKYISL 127

Query: 378 LDLKRPFTPMKDLDMEEVISNIVKKL 301
           LD+KRPF PMK LDM++VIS+I+ K+
Sbjct: 128 LDMKRPFAPMKALDMDKVISDIIDKI 153


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