BLASTX nr result

ID: Coptis24_contig00003423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003423
         (1137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282115.1| PREDICTED: uncharacterized protein LOC100253...   309   1e-81
emb|CBI16270.3| unnamed protein product [Vitis vinifera]              309   1e-81
emb|CAN60320.1| hypothetical protein VITISV_002854 [Vitis vinifera]   307   3e-81
ref|XP_002526351.1| Adenylate kinase isoenzyme, putative [Ricinu...   292   1e-76
ref|XP_002318179.1| predicted protein [Populus trichocarpa] gi|2...   285   1e-74

>ref|XP_002282115.1| PREDICTED: uncharacterized protein LOC100253475 [Vitis vinifera]
          Length = 383

 Score =  309 bits (791), Expect = 1e-81
 Identities = 141/173 (81%), Positives = 160/173 (92%)
 Frame = -2

Query: 875 MAQNPRKKPNILITGTPGVGKTTTSSLLADATQLHHINIGELVKQNNLYDGWDEDFHCHV 696
           MAQN RKKPNIL+TGTPG GKTTTS  LA+ATQL HINIGELV++ NL+DGWD+ F CH+
Sbjct: 1   MAQNSRKKPNILVTGTPGTGKTTTSFSLAEATQLRHINIGELVREKNLHDGWDDQFDCHI 60

Query: 695 INEDLVCDELEDMMEEGGNIVDYHGCDFFPQRWFDRVVVLQTNNSVLYDRLSNRGYMGTK 516
           INEDLVCDELED+MEEGGNIVDYHGCDFFP+RWFDRVVVLQT+NSVLYDRLS RGY G+K
Sbjct: 61  INEDLVCDELEDLMEEGGNIVDYHGCDFFPERWFDRVVVLQTDNSVLYDRLSTRGYTGSK 120

Query: 515 LSNNIECEIFQVLLEEAKTSYPEEIVIALQSDSVDDISRNVGMLTDWLRNWQP 357
           LSNNIECEIFQVLLEEAK SYPE++V+AL+SD+VDDI+RNV  LTDW+R+WQP
Sbjct: 121 LSNNIECEIFQVLLEEAKESYPEDVVVALKSDTVDDITRNVASLTDWVRSWQP 173


>emb|CBI16270.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  309 bits (791), Expect = 1e-81
 Identities = 141/173 (81%), Positives = 160/173 (92%)
 Frame = -2

Query: 875 MAQNPRKKPNILITGTPGVGKTTTSSLLADATQLHHINIGELVKQNNLYDGWDEDFHCHV 696
           MAQN RKKPNIL+TGTPG GKTTTS  LA+ATQL HINIGELV++ NL+DGWD+ F CH+
Sbjct: 1   MAQNSRKKPNILVTGTPGTGKTTTSFSLAEATQLRHINIGELVREKNLHDGWDDQFDCHI 60

Query: 695 INEDLVCDELEDMMEEGGNIVDYHGCDFFPQRWFDRVVVLQTNNSVLYDRLSNRGYMGTK 516
           INEDLVCDELED+MEEGGNIVDYHGCDFFP+RWFDRVVVLQT+NSVLYDRLS RGY G+K
Sbjct: 61  INEDLVCDELEDLMEEGGNIVDYHGCDFFPERWFDRVVVLQTDNSVLYDRLSTRGYTGSK 120

Query: 515 LSNNIECEIFQVLLEEAKTSYPEEIVIALQSDSVDDISRNVGMLTDWLRNWQP 357
           LSNNIECEIFQVLLEEAK SYPE++V+AL+SD+VDDI+RNV  LTDW+R+WQP
Sbjct: 121 LSNNIECEIFQVLLEEAKESYPEDVVVALKSDTVDDITRNVASLTDWVRSWQP 173


>emb|CAN60320.1| hypothetical protein VITISV_002854 [Vitis vinifera]
          Length = 175

 Score =  307 bits (787), Expect = 3e-81
 Identities = 141/173 (81%), Positives = 159/173 (91%)
 Frame = -2

Query: 875 MAQNPRKKPNILITGTPGVGKTTTSSLLADATQLHHINIGELVKQNNLYDGWDEDFHCHV 696
           MAQN RKKPNIL+TGTPG GKTTTS  LA+ATQL HINIGELV++ NL+DGWD+ F CH+
Sbjct: 1   MAQNSRKKPNILVTGTPGTGKTTTSFSLAEATQLRHINIGELVREKNLHDGWDDQFDCHI 60

Query: 695 INEDLVCDELEDMMEEGGNIVDYHGCDFFPQRWFDRVVVLQTNNSVLYDRLSNRGYMGTK 516
           INEDLVCDELED+MEEGGNIVDYHGCDFFP+RWFDRVVVLQT+NSVLYDRLS RGY G+K
Sbjct: 61  INEDLVCDELEDLMEEGGNIVDYHGCDFFPERWFDRVVVLQTDNSVLYDRLSTRGYTGSK 120

Query: 515 LSNNIECEIFQVLLEEAKTSYPEEIVIALQSDSVDDISRNVGMLTDWLRNWQP 357
           LSNNIECEIFQVLLEEAK SYPE+ V+AL+SD+VDDI+RNV  LTDW+R+WQP
Sbjct: 121 LSNNIECEIFQVLLEEAKESYPEDXVVALKSDTVDDITRNVASLTDWVRSWQP 173


>ref|XP_002526351.1| Adenylate kinase isoenzyme, putative [Ricinus communis]
           gi|223534310|gb|EEF36022.1| Adenylate kinase isoenzyme,
           putative [Ricinus communis]
          Length = 177

 Score =  292 bits (747), Expect = 1e-76
 Identities = 135/177 (76%), Positives = 157/177 (88%), Gaps = 2/177 (1%)
 Frame = -2

Query: 875 MAQ--NPRKKPNILITGTPGVGKTTTSSLLADATQLHHINIGELVKQNNLYDGWDEDFHC 702
           MAQ  N R+KPN+LITGTPG GKTTTSS LA+ATQ  HINIG+LVK+ NL+DGWD+ F C
Sbjct: 1   MAQDNNKRRKPNLLITGTPGTGKTTTSSALAEATQFRHINIGDLVKEKNLHDGWDDQFDC 60

Query: 701 HVINEDLVCDELEDMMEEGGNIVDYHGCDFFPQRWFDRVVVLQTNNSVLYDRLSNRGYMG 522
           H+INEDLVCDELED+MEEGGNIVDYHGCDFFP+RWFDRVVVLQT NS+L+DRLS RGY  
Sbjct: 61  HIINEDLVCDELEDIMEEGGNIVDYHGCDFFPERWFDRVVVLQTENSILFDRLSKRGYSQ 120

Query: 521 TKLSNNIECEIFQVLLEEAKTSYPEEIVIALQSDSVDDISRNVGMLTDWLRNWQPAS 351
            K++NNIECEIFQVLLEEAK +Y E+IV+AL+SDSV+DI+RNV  LTDW+R+WQP S
Sbjct: 121 NKITNNIECEIFQVLLEEAKENYAEDIVMALRSDSVEDITRNVATLTDWVRSWQPVS 177


>ref|XP_002318179.1| predicted protein [Populus trichocarpa] gi|222858852|gb|EEE96399.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  285 bits (729), Expect = 1e-74
 Identities = 134/181 (74%), Positives = 154/181 (85%), Gaps = 3/181 (1%)
 Frame = -2

Query: 893 LRLGIVMAQNP---RKKPNILITGTPGVGKTTTSSLLADATQLHHINIGELVKQNNLYDG 723
           +R    MAQ     RKKPNILITGTPG GKTTT+S LA+ATQ  HINIG+LVK+ NL+DG
Sbjct: 1   MRKAASMAQRDSDMRKKPNILITGTPGTGKTTTASALAEATQFRHINIGDLVKEKNLHDG 60

Query: 722 WDEDFHCHVINEDLVCDELEDMMEEGGNIVDYHGCDFFPQRWFDRVVVLQTNNSVLYDRL 543
           WD+ F C++INEDLVCDELED+MEEGGNIVDYHGCDFFP+RWFD+VVVLQT+NSVLYDRL
Sbjct: 61  WDDQFDCYIINEDLVCDELEDIMEEGGNIVDYHGCDFFPERWFDQVVVLQTDNSVLYDRL 120

Query: 542 SNRGYMGTKLSNNIECEIFQVLLEEAKTSYPEEIVIALQSDSVDDISRNVGMLTDWLRNW 363
           S RGY  TK+SNN+ECEIFQVLLEEAK SYPE IV+AL+SDS+DDI+ N+  LT WL  W
Sbjct: 121 SKRGYSETKISNNMECEIFQVLLEEAKESYPEGIVVALRSDSIDDITNNIATLTHWLTTW 180

Query: 362 Q 360
           Q
Sbjct: 181 Q 181


Top