BLASTX nr result

ID: Coptis24_contig00003417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003417
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O81361.1|RS8_PRUAR RecName: Full=40S ribosomal protein S8 gi|...   137   7e-31
gb|ACJ86093.1| unknown [Medicago truncatula] gi|388491746|gb|AFK...   137   9e-31
ref|NP_001240243.1| uncharacterized protein LOC100813170 [Glycin...   137   1e-30
gb|ABB72814.1| putative 40S ribosomal protein S8-like protein [S...   136   2e-30
gb|AFK47179.1| unknown [Medicago truncatula]                          136   2e-30

>sp|O81361.1|RS8_PRUAR RecName: Full=40S ribosomal protein S8 gi|3264759|gb|AAC24583.1|
           40S ribosomal protein S8 [Prunus armeniaca]
          Length = 221

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/68 (97%), Positives = 68/68 (100%)
 Frame = -2

Query: 204 LRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYLQHY 25
           LRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAI+QVDAAPF+QWYLQHY
Sbjct: 59  LRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 118

Query: 24  GVEIGRKK 1
           GVEIGRKK
Sbjct: 119 GVEIGRKK 126


>gb|ACJ86093.1| unknown [Medicago truncatula] gi|388491746|gb|AFK33939.1| unknown
           [Medicago truncatula]
          Length = 217

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/68 (95%), Positives = 68/68 (100%)
 Frame = -2

Query: 204 LRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYLQHY 25
           LRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAI+QVDAAPF+QWYLQHY
Sbjct: 59  LRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 118

Query: 24  GVEIGRKK 1
           GVE+GRKK
Sbjct: 119 GVEVGRKK 126


>ref|NP_001240243.1| uncharacterized protein LOC100813170 [Glycine max]
           gi|255636051|gb|ACU18370.1| unknown [Glycine max]
          Length = 217

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/68 (95%), Positives = 68/68 (100%)
 Frame = -2

Query: 204 LRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYLQHY 25
           LRLDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAI+QVDAAPFRQWYLQHY
Sbjct: 59  LRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYLQHY 118

Query: 24  GVEIGRKK 1
           GVEIGRKK
Sbjct: 119 GVEIGRKK 126


>gb|ABB72814.1| putative 40S ribosomal protein S8-like protein [Solanum tuberosum]
          Length = 221

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/68 (95%), Positives = 68/68 (100%)
 Frame = -2

Query: 204 LRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYLQHY 25
           LRLDTGN+SWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAI+QVDAAPF+QWYLQHY
Sbjct: 60  LRLDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 119

Query: 24  GVEIGRKK 1
           GVEIGRKK
Sbjct: 120 GVEIGRKK 127


>gb|AFK47179.1| unknown [Medicago truncatula]
          Length = 215

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/68 (95%), Positives = 68/68 (100%)
 Frame = -2

Query: 204 LRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIIQVDAAPFRQWYLQHY 25
           LRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAI+QVDAAPF+QWYLQHY
Sbjct: 59  LRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHY 118

Query: 24  GVEIGRKK 1
           GV+IGRKK
Sbjct: 119 GVDIGRKK 126


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