BLASTX nr result

ID: Coptis24_contig00003409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003409
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271143.2| PREDICTED: receptor-like protein kinase HAIK...    97   1e-18
emb|CAN65551.1| hypothetical protein VITISV_033329 [Vitis vinifera]    97   1e-18
ref|XP_002510007.1| Receptor protein kinase CLAVATA1 precursor, ...    91   1e-16
ref|XP_002889779.1| hypothetical protein ARALYDRAFT_888250 [Arab...    91   1e-16
ref|XP_002283604.2| PREDICTED: receptor-like protein kinase HAIK...    89   3e-16

>ref|XP_002271143.2| PREDICTED: receptor-like protein kinase HAIKU2 [Vitis vinifera]
          Length = 975

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/90 (56%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = -1

Query: 267 SDELQILLQVKSAFQKPNTPVLDSWRSDTSPCNFTGIVCDKQS-VTQIDLPGHQLVGALP 91
           SDELQILL+ KSA +K NT V D+W    S  NFTGIVC+    VT+I LP  QL G LP
Sbjct: 28  SDELQILLKFKSALEKSNTSVFDTWTQGNSVRNFTGIVCNSNGFVTEILLPEQQLEGVLP 87

Query: 90  IDLICKLQSLEMLNLGSNLLSGTISKGLNN 1
            D IC+L+SLE ++LG+N+L G I +GL N
Sbjct: 88  FDSICELKSLEKIDLGANVLHGGIGEGLKN 117


>emb|CAN65551.1| hypothetical protein VITISV_033329 [Vitis vinifera]
          Length = 1253

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/90 (56%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = -1

Query: 267 SDELQILLQVKSAFQKPNTPVLDSWRSDTSPCNFTGIVCDKQS-VTQIDLPGHQLVGALP 91
           SDELQILL+ KSA +K NT V D+W    S  NFTGIVC+    VT+I LP  QL G LP
Sbjct: 28  SDELQILLKFKSALEKSNTSVFDTWTQGNSVRNFTGIVCNSNGFVTEILLPEQQLEGVLP 87

Query: 90  IDLICKLQSLEMLNLGSNLLSGTISKGLNN 1
            D IC+L+SLE ++LG+N+L G I +GL N
Sbjct: 88  FDSICELKSLEKIDLGANVLHGGIGEGLKN 117


>ref|XP_002510007.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
           communis] gi|223550708|gb|EEF52194.1| Receptor protein
           kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 973

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/96 (53%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = -1

Query: 285 YVFS-YDSDELQILLQVKSAFQKPNTPVLDSWRSDTSPCNFTGIVCDKQ-SVTQIDLPGH 112
           Y FS   SDELQILL +K++ Q  +T V DSW S    C+FTGI C    SV +I+L   
Sbjct: 16  YFFSAVKSDELQILLNLKTSLQNSHTNVFDSWDSTNFICDFTGITCTSDNSVKEIELSSR 75

Query: 111 QLVGALPIDLICKLQSLEMLNLGSNLLSGTISKGLN 4
            L G LP+D +C LQSLE L+LG N LSG IS  LN
Sbjct: 76  NLSGVLPLDRVCNLQSLEKLSLGFNSLSGVISVDLN 111


>ref|XP_002889779.1| hypothetical protein ARALYDRAFT_888250 [Arabidopsis lyrata subsp.
           lyrata] gi|297335621|gb|EFH66038.1| hypothetical protein
           ARALYDRAFT_888250 [Arabidopsis lyrata subsp. lyrata]
          Length = 976

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
 Frame = -1

Query: 267 SDELQILLQVKSAFQKPNTPVLDSW--RSDTSPCNFTGIVCDKQ-SVTQIDLPGHQLVGA 97
           SD+LQ+LL++KS+F   N  V DSW   S T PC+FTG+ C+ + +VT+IDL    L G 
Sbjct: 28  SDDLQVLLKLKSSFADSNLAVFDSWMLNSRTGPCSFTGVTCNSRGNVTEIDLSRQGLSGN 87

Query: 96  LPIDLICKLQSLEMLNLGSNLLSGTISKGLNN 1
            P DL+C++QSLE L+LG N LSG I   + N
Sbjct: 88  FPFDLVCEIQSLEKLSLGFNSLSGIIPSNMRN 119


>ref|XP_002283604.2| PREDICTED: receptor-like protein kinase HAIKU2-like [Vitis
           vinifera]
          Length = 984

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
 Frame = -1

Query: 267 SDELQILLQVKSAFQKPNTPVLDSWRSDTSPCNFTGIVCDKQS-VTQIDLPGHQLVGALP 91
           SDE+Q+LL+VK+  Q  +T V DSW S+ S CNF GI C+    V +I+L   +L G +P
Sbjct: 28  SDEIQLLLKVKAELQNFDTYVFDSWESNDSACNFRGITCNSDGRVREIELSNQRLSGVVP 87

Query: 90  IDLICKLQSLEMLNLGSNLLSGTISKGLN 4
           ++ IC+L+SLE L+LG N L GTIS  LN
Sbjct: 88  LESICQLESLEKLSLGFNFLQGTISGDLN 116


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