BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003408
         (1578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162573.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   541   e-151
ref|XP_004149532.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   541   e-151
ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicag...   536   e-150
emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]   531   e-148
ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   531   e-148

>ref|XP_004162573.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Cucumis
            sativus]
          Length = 611

 Score =  541 bits (1395), Expect = e-151
 Identities = 287/444 (64%), Positives = 347/444 (78%), Gaps = 23/444 (5%)
 Frame = +2

Query: 158  GLEITKLGISDEIVSALARRGITELFPIQRAVLDPAMEGRDMIGRAITGSGKTLAFGIPI 337
            GLEI KLGI+ EIVSALAR+GIT+LFPIQRAVL+PAM+GRDMIGRA TG+GKTLAFGIPI
Sbjct: 106  GLEIGKLGIAPEIVSALARKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 165

Query: 338  LDKIIQNRSSHRQRQVPSALVLAPTRELARQVQKEFKESAPKLSSVCLYGGVPIMSQVRA 517
            LDK+IQ  + + + + P ALVLAPTRELARQV+KEF+E+AP L ++C+YGG PI  Q+R 
Sbjct: 166  LDKLIQFNAKNGRGRNPLALVLAPTRELARQVEKEFQEAAPSLDTICVYGGAPISQQMRQ 225

Query: 518  LGYGVDIAVGTPGRIIDLVERGALNLSEVRFVVLDEADQMLAVGFQEDVECILGYLPAKR 697
            L YGVDIAVGTPGR+IDL+ RG+LNLSEV+FVVLDEADQML VGFQEDVE IL  LP KR
Sbjct: 226  LDYGVDIAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKR 285

Query: 698  QSMLFSATMPSWVTQLSRKFLKDPVVIDLVGGSDQKLADGISLYSVVSTSSGKENILPTL 877
            QSM+FSATMPSW+ +LSR +L +P+ IDLVG SDQKLADGISL+SVVS + GK +I+  L
Sbjct: 286  QSMMFSATMPSWILKLSRNYLNNPLTIDLVGDSDQKLADGISLFSVVSETYGKASIIGPL 345

Query: 878  ISKYGRGGKSIIFTRTKRDAEDLSRSMGSILASRALHGNMQQMQRDRTLSAFRDGRFSVL 1057
            I+++G+GGK IIFT+TKRDA+ L+ +MG  L   ALHG++ Q QR+RTLS FRDGRF+VL
Sbjct: 346  ITEHGKGGKCIIFTQTKRDADRLAYAMGRNLRCEALHGDISQSQRERTLSGFRDGRFNVL 405

Query: 1058 VATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSGRTGRAGKKGTAVLMYTRAQRRAVTD 1237
            VATDVAARGLDIPNVDLVIHFE+PN +EIFVHRSGRTGRAGKKG+ +L+Y++ Q RA+  
Sbjct: 406  VATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSVILIYSQDQTRAIRM 465

Query: 1238 IERDIGCKFEEISRITDDIG--------------------NNTGRMYGEDRSYGRSG--- 1348
            IER++GC+F E+ RIT + G                    NN+GR      S+GRSG   
Sbjct: 466  IEREVGCRFNELPRITVEAGAHVDMFSGGSFGGGFGDRQMNNSGRFGNRGGSFGRSGGYE 525

Query: 1349 SPREGRYSDSFSEPQYGGYKGSRG 1420
            S   GR     S P  G + GS G
Sbjct: 526  SSSFGRSIGRNSGPSSGSF-GSFG 548


>ref|XP_004149532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Cucumis
            sativus]
          Length = 593

 Score =  541 bits (1395), Expect = e-151
 Identities = 287/444 (64%), Positives = 347/444 (78%), Gaps = 23/444 (5%)
 Frame = +2

Query: 158  GLEITKLGISDEIVSALARRGITELFPIQRAVLDPAMEGRDMIGRAITGSGKTLAFGIPI 337
            GLEI KLGI+ EIVSALAR+GIT+LFPIQRAVL+PAM+GRDMIGRA TG+GKTLAFGIPI
Sbjct: 106  GLEIGKLGIAPEIVSALARKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 165

Query: 338  LDKIIQNRSSHRQRQVPSALVLAPTRELARQVQKEFKESAPKLSSVCLYGGVPIMSQVRA 517
            LDK+IQ  + + + + P ALVLAPTRELARQV+KEF+E+AP L ++C+YGG PI  Q+R 
Sbjct: 166  LDKLIQFNAKNGRGRNPLALVLAPTRELARQVEKEFQEAAPSLDTICVYGGAPISQQMRQ 225

Query: 518  LGYGVDIAVGTPGRIIDLVERGALNLSEVRFVVLDEADQMLAVGFQEDVECILGYLPAKR 697
            L YGVDIAVGTPGR+IDL+ RG+LNLSEV+FVVLDEADQML VGFQEDVE IL  LP KR
Sbjct: 226  LDYGVDIAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQEDVEKILERLPQKR 285

Query: 698  QSMLFSATMPSWVTQLSRKFLKDPVVIDLVGGSDQKLADGISLYSVVSTSSGKENILPTL 877
            QSM+FSATMPSW+ +LSR +L +P+ IDLVG SDQKLADGISL+SVVS + GK +I+  L
Sbjct: 286  QSMMFSATMPSWILKLSRNYLNNPLTIDLVGDSDQKLADGISLFSVVSETYGKASIIGPL 345

Query: 878  ISKYGRGGKSIIFTRTKRDAEDLSRSMGSILASRALHGNMQQMQRDRTLSAFRDGRFSVL 1057
            I+++G+GGK IIFT+TKRDA+ L+ +MG  L   ALHG++ Q QR+RTLS FRDGRF+VL
Sbjct: 346  ITEHGKGGKCIIFTQTKRDADRLAYAMGRNLRCEALHGDISQSQRERTLSGFRDGRFNVL 405

Query: 1058 VATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSGRTGRAGKKGTAVLMYTRAQRRAVTD 1237
            VATDVAARGLDIPNVDLVIHFE+PN +EIFVHRSGRTGRAGKKG+ +L+Y++ Q RA+  
Sbjct: 406  VATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKGSVILIYSQDQTRAIRM 465

Query: 1238 IERDIGCKFEEISRITDDIG--------------------NNTGRMYGEDRSYGRSG--- 1348
            IER++GC+F E+ RIT + G                    NN+GR      S+GRSG   
Sbjct: 466  IEREVGCRFNELPRITVEAGAHVDMFSGGSFGGGFGDRQMNNSGRFGNRGGSFGRSGGYE 525

Query: 1349 SPREGRYSDSFSEPQYGGYKGSRG 1420
            S   GR     S P  G + GS G
Sbjct: 526  SSSFGRSIGRNSGPSSGSF-GSFG 548


>ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355518636|gb|AET00260.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 802

 Score =  536 bits (1381), Expect = e-150
 Identities = 277/457 (60%), Positives = 344/457 (75%), Gaps = 4/457 (0%)
 Frame = +2

Query: 158  GLEITKLGISDEIVSALARRGITELFPIQRAVLDPAMEGRDMIGRAITGSGKTLAFGIPI 337
            GLEI KLGIS +IVSAL ++GIT+LFPIQRAVL+PAM+GRDMIGRA TG+GKTLAFGIPI
Sbjct: 79   GLEIAKLGISQDIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 138

Query: 338  LDKIIQNRSSHRQRQVPSALVLAPTRELARQVQKEFKESAPKLSSVCLYGGVPIMSQVRA 517
            +DKIIQ  + H + + P ALVLAPTRELA+QV+KEF E+AP L ++C+YGG PI  Q+R 
Sbjct: 139  MDKIIQFNAKHGRGKDPLALVLAPTRELAKQVEKEFYEAAPNLDTICVYGGTPISQQMRQ 198

Query: 518  LGYGVDIAVGTPGRIIDLVERGALNLSEVRFVVLDEADQMLAVGFQEDVECILGYLPAKR 697
            L YGVDIAVGTPGRIIDL+ RGALNL EV+FV+LDEADQML VGFQEDVE IL  LPA+R
Sbjct: 199  LDYGVDIAVGTPGRIIDLLNRGALNLKEVQFVILDEADQMLQVGFQEDVEKILERLPAER 258

Query: 698  QSMLFSATMPSWVTQLSRKFLKDPVVIDLVGGSDQKLADGISLYSVVSTSSGKENILPTL 877
            Q+++FSATMP+W+ QL+R +LK+P+ IDLVG SDQKLADGISLYS++S +  K  I+  L
Sbjct: 259  QTLMFSATMPTWIKQLTRNYLKNPLTIDLVGDSDQKLADGISLYSILSDAYVKAGIIVPL 318

Query: 878  ISKYGRGGKSIIFTRTKRDAEDLSRSMGSILASRALHGNMQQMQRDRTLSAFRDGRFSVL 1057
            I ++ +GGK I+FT+TKRDA+ +S  M   +   ALHG++ Q+QR+RTL+ FR+G F+VL
Sbjct: 319  IKEHAKGGKCIVFTQTKRDADRISHGMSKSIPCEALHGDISQIQRERTLAGFRNGHFNVL 378

Query: 1058 VATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSGRTGRAGKKGTAVLMYTRAQRRAVTD 1237
            VATDVA+RGLDIPNVDLVIH+E+PN SEIFVHRSGRTGRAGKKGTA+L+YT+ Q R +  
Sbjct: 379  VATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVYTQDQSRTLRT 438

Query: 1238 IERDIGCKFEEISRITDDI----GNNTGRMYGEDRSYGRSGSPREGRYSDSFSEPQYGGY 1405
            IERD+GCKF E+ +I  D     G + G  +G    +G  G  R G    SF   + GGY
Sbjct: 439  IERDVGCKFSELPKIAVDTASLGGFSGGGRFGGGGGFGGGGGGRSG----SFGGGRSGGY 494

Query: 1406 KGSRGYXXXXXXXXXXXXXXXXDSFSEPQYGGYKGSR 1516
              S G+                 S+ E +YGG    R
Sbjct: 495  SNSGGF--SGSRQSGGGFSGGSSSYGENRYGGSSSGR 529


>emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]
          Length = 666

 Score =  531 bits (1369), Expect = e-148
 Identities = 280/443 (63%), Positives = 341/443 (76%), Gaps = 23/443 (5%)
 Frame = +2

Query: 158  GLEITKLGISDEIVSALARRGITELFPIQRAVLDPAMEGRDMIGRAITGSGKTLAFGIPI 337
            GLEI+KLGI+ EIVSALA +GIT+LFPIQRAVL+PAM+GRDMIGRA TG+GKTLAFGIPI
Sbjct: 114  GLEISKLGIAQEIVSALANKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 173

Query: 338  LDKIIQNRSSHRQRQVPSALVLAPTRELARQVQKEFKESAPKLSSVCLYGGVPIMSQVRA 517
            +DK+IQ  + H + + P ALVLAPTRELARQV+KEF ESAP L ++C+YGG PI  Q+ +
Sbjct: 174  MDKVIQYNAKHGRGRNPLALVLAPTRELARQVEKEFXESAPNLDTLCVYGGTPISRQMNS 233

Query: 518  LGYGVDIAVGTPGRIIDLVERGALNLSEVRFVVLDEADQMLAVGFQEDVECILGYLPAKR 697
            L YGVD+ VGTPGRIIDL++RGALNLSEV+FVVLDEADQMLAVGF+EDVE IL  LP  R
Sbjct: 234  LDYGVDVVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNR 293

Query: 698  QSMLFSATMPSWVTQLSRKFLKDPVVIDLVGGSDQKLADGISLYSVVSTSSGKENILPTL 877
            QSM+FSATMPSW+ +L++K+LK+P+ IDLVG SDQKLA+GISLYS+ S    K +I+  L
Sbjct: 294  QSMMFSATMPSWIRKLTQKYLKNPLTIDLVGDSDQKLAEGISLYSIASEMYEKASIVGPL 353

Query: 878  ISKYGRGGKSIIFTRTKRDAEDLSRSMGSILASRALHGNMQQMQRDRTLSAFRDGRFSVL 1057
            I+++ +GGK I+FT+TKRDA+ L+ +M       ALHG++ Q QR+RTLS FRDG F+VL
Sbjct: 354  ITEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVL 413

Query: 1058 VATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSGRTGRAGKKGTAVLMYTRAQRRAVTD 1237
            VATDVAARGLDIPNVDL+IH+E+PN+SEIFVHRSGRTGRAGKKGTA+L+Y   Q R V  
Sbjct: 414  VATDVAARGLDIPNVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRF 473

Query: 1238 IERDIGCKFEEISRI----------TDDIGNNTGRMYGEDRS---------YGRSGSP-- 1354
            IERDIGCKF E+ RI          +D  G   G  +G   S         +GRSGS   
Sbjct: 474  IERDIGCKFSELPRIAIEGGSRDMLSDMGGGGDGGRFGSFGSRGGGRVGGGFGRSGSSFG 533

Query: 1355 REGRYSDSFS--EPQYGGYKGSR 1417
            R G Y +S S     +GG+  SR
Sbjct: 534  RSGGYGESGSGRSGSFGGFGSSR 556


>ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Vitis
            vinifera]
          Length = 666

 Score =  531 bits (1367), Expect = e-148
 Identities = 280/443 (63%), Positives = 341/443 (76%), Gaps = 23/443 (5%)
 Frame = +2

Query: 158  GLEITKLGISDEIVSALARRGITELFPIQRAVLDPAMEGRDMIGRAITGSGKTLAFGIPI 337
            GLEI+KLGI+ EIVSALA +GIT+LFPIQRAVL+PAM+GRDMIGRA TG+GKTLAFGIPI
Sbjct: 114  GLEISKLGIAQEIVSALANKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPI 173

Query: 338  LDKIIQNRSSHRQRQVPSALVLAPTRELARQVQKEFKESAPKLSSVCLYGGVPIMSQVRA 517
            +DK+IQ  + H + + P ALVLAPTRELARQV+KEF ESAP L ++C+YGG PI  Q+ +
Sbjct: 174  MDKVIQYNAKHGRGRNPLALVLAPTRELARQVEKEFCESAPNLDTLCVYGGTPISRQMNS 233

Query: 518  LGYGVDIAVGTPGRIIDLVERGALNLSEVRFVVLDEADQMLAVGFQEDVECILGYLPAKR 697
            L YGVD+ VGTPGRIIDL++RGALNLSEV+FVVLDEADQMLAVGF+EDVE IL  LP  R
Sbjct: 234  LDYGVDVVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNR 293

Query: 698  QSMLFSATMPSWVTQLSRKFLKDPVVIDLVGGSDQKLADGISLYSVVSTSSGKENILPTL 877
            QSM+FSATMPSW+ +L++K+LK+P+ IDLVG SDQKLA+GISLYS+ S    K +I+  L
Sbjct: 294  QSMMFSATMPSWIRKLTQKYLKNPLTIDLVGDSDQKLAEGISLYSIASEMYEKASIVGPL 353

Query: 878  ISKYGRGGKSIIFTRTKRDAEDLSRSMGSILASRALHGNMQQMQRDRTLSAFRDGRFSVL 1057
            I+++ +GGK I+FT+TKRDA+ L+ +M       ALHG++ Q QR+RTLS FRDG F+VL
Sbjct: 354  ITEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVL 413

Query: 1058 VATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSGRTGRAGKKGTAVLMYTRAQRRAVTD 1237
            VATDVAARGLDIPNVDL+IH+E+PN+SEIFVHRSGRTGRAGKKGTA+L+Y   Q R V  
Sbjct: 414  VATDVAARGLDIPNVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRF 473

Query: 1238 IERDIGCKFEEISRI----------TDDIGNNTGRMYGEDRS---------YGRSGSP-- 1354
            IERDIGCKF E+ RI          +D  G   G  +G   S         +GRSGS   
Sbjct: 474  IERDIGCKFSELPRIAIEGGSRDMFSDMGGGGDGGRFGSFGSRGGGRVGGGFGRSGSSFG 533

Query: 1355 REGRYSDSFS--EPQYGGYKGSR 1417
            R G Y +S S     +GG+  SR
Sbjct: 534  RSGGYGESGSGRSGSFGGFGSSR 556