BLASTX nr result

ID: Coptis24_contig00003407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003407
         (1350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517705.1| PREDICTED: eukaryotic translation initiation...   558   e-157
ref|XP_003534423.1| PREDICTED: eukaryotic translation initiation...   558   e-156
gb|AAK49947.1|AF335551_1 TGF-beta receptor-interacting protein 1...   557   e-156
ref|XP_003540532.1| PREDICTED: eukaryotic translation initiation...   556   e-156
ref|XP_004136687.1| PREDICTED: eukaryotic translation initiation...   556   e-156

>ref|XP_003517705.1| PREDICTED: eukaryotic translation initiation factor 3 subunit I-like
            [Glycine max]
          Length = 326

 Score =  558 bits (1439), Expect = e-157
 Identities = 265/326 (81%), Positives = 296/326 (90%)
 Frame = +1

Query: 79   MRPILMKGHERPLTYLVYNIEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 258
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VWFADNGERLGTY GHNG VWCCDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDV 60

Query: 259  SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 438
            SRDS RLITGSADQT KLW+V+ G QLFTFNF +PARSVDF VGD +AV+TTD FM+   
Sbjct: 61   SRDSGRLITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELPS 120

Query: 439  AIHVKRIAQDPSEQSGKSILEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 618
            AIHVKRIA DP+EQ+G+S+L IK P+G+INRA++GPLN+TIISAGEDAV+RIWD+ETGKL
Sbjct: 121  AIHVKRIANDPAEQTGESVLLIKGPQGRINRAIWGPLNRTIISAGEDAVIRIWDSETGKL 180

Query: 619  IKESDKETGHQKTITSLSKSKDESHFLTGSHDKSARLWDIRSLALIKTYVTESPVNAVDI 798
            +KESDKE+GH+KT+TSL+KS D SHFLTGS DKSARLWD R+L LIKTYVTE PVNAV +
Sbjct: 181  LKESDKESGHKKTVTSLAKSADGSHFLTGSLDKSARLWDTRTLTLIKTYVTERPVNAVAM 240

Query: 799  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDG 978
            SPLLDHVV+GGGQDAS+VT TD RAGKFEAKF+ KILQEEIGGVKGHFGPINALAFNPDG
Sbjct: 241  SPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 979  RSFSSGGEDGYIRLHHFDPDYFNIKI 1056
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326


>ref|XP_003534423.1| PREDICTED: eukaryotic translation initiation factor 3 subunit I-like
            [Glycine max]
          Length = 326

 Score =  558 bits (1438), Expect = e-156
 Identities = 268/326 (82%), Positives = 295/326 (90%)
 Frame = +1

Query: 79   MRPILMKGHERPLTYLVYNIEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 258
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VWFADNGERLGTY GHNG VW CDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWTCDV 60

Query: 259  SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 438
            SRDS RLITGSADQT KLWDV++G QL+TFNF +PARSVDF VGD +AV+TTD FM+ + 
Sbjct: 61   SRDSVRLITGSADQTAKLWDVQSGLQLYTFNFDSPARSVDFSVGDRLAVITTDPFMELSS 120

Query: 439  AIHVKRIAQDPSEQSGKSILEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 618
            AIHVKRIA DP+EQSG+S+L IK P G+INRA++GPLN TIISAGEDAV+RIWD+ETGKL
Sbjct: 121  AIHVKRIADDPTEQSGESLLLIKGPLGRINRAIWGPLNSTIISAGEDAVIRIWDSETGKL 180

Query: 619  IKESDKETGHQKTITSLSKSKDESHFLTGSHDKSARLWDIRSLALIKTYVTESPVNAVDI 798
            +KESDKE+GH+KT+TSL+KS D SHFLTGS DKSARLWD RSL LIKTYVTE PVNAV +
Sbjct: 181  LKESDKESGHKKTVTSLAKSADGSHFLTGSLDKSARLWDTRSLTLIKTYVTERPVNAVTM 240

Query: 799  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDG 978
            SPLLDHVVIGGGQDAS+VT TD RAGKFEAKFF KILQEEIGGVKGHFGPINALAFNPDG
Sbjct: 241  SPLLDHVVIGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 979  RSFSSGGEDGYIRLHHFDPDYFNIKI 1056
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326


>gb|AAK49947.1|AF335551_1 TGF-beta receptor-interacting protein 1 [Phaseolus vulgaris]
          Length = 326

 Score =  557 bits (1436), Expect = e-156
 Identities = 265/326 (81%), Positives = 295/326 (90%)
 Frame = +1

Query: 79   MRPILMKGHERPLTYLVYNIEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 258
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VWFADNGERLGTY GHNG VWCCDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDV 60

Query: 259  SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 438
            SRDS RLITGSADQT KLW+V+ G QLFTFNF +PARSVDF VGD +AV+TTD FM+   
Sbjct: 61   SRDSGRLITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFSVGDKLAVITTDPFMELPS 120

Query: 439  AIHVKRIAQDPSEQSGKSILEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 618
            AIHVKRIA DP+EQ+G S++ IK P+G+INRA++GPLN+TIISAGEDAV+RIWD+ETGKL
Sbjct: 121  AIHVKRIANDPTEQTGDSVVLIKGPQGRINRAIWGPLNRTIISAGEDAVIRIWDSETGKL 180

Query: 619  IKESDKETGHQKTITSLSKSKDESHFLTGSHDKSARLWDIRSLALIKTYVTESPVNAVDI 798
            IKESDKE+GH+KT+TSL+KS D SHFLTGS DKSARLWD R+L LIKTYVTE PVNAV +
Sbjct: 181  IKESDKESGHKKTVTSLAKSADGSHFLTGSLDKSARLWDTRTLTLIKTYVTERPVNAVAM 240

Query: 799  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDG 978
            SPLLDHVV+GGGQDAS+VT TD RAGKFEAKF+ KILQEEIGGVKGHFGPINALAFNPDG
Sbjct: 241  SPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 979  RSFSSGGEDGYIRLHHFDPDYFNIKI 1056
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326


>ref|XP_003540532.1| PREDICTED: eukaryotic translation initiation factor 3 subunit I-like
            [Glycine max] gi|255646294|gb|ACU23631.1| unknown
            [Glycine max]
          Length = 326

 Score =  556 bits (1434), Expect = e-156
 Identities = 266/326 (81%), Positives = 295/326 (90%)
 Frame = +1

Query: 79   MRPILMKGHERPLTYLVYNIEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 258
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VWFADNGERLGTY GHNG VW CDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWTCDV 60

Query: 259  SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 438
            SRDS RLITGSADQT KLWDV++G QL+TFNF +PARSVDF VGD +AV+TTD FM+   
Sbjct: 61   SRDSARLITGSADQTAKLWDVQSGLQLYTFNFDSPARSVDFSVGDKLAVITTDPFMELPS 120

Query: 439  AIHVKRIAQDPSEQSGKSILEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 618
            AIHVKRIA DPS+Q G+S+L IK P+G+INRA++GPLN TIISAGEDAV+RIWD+ETGKL
Sbjct: 121  AIHVKRIANDPSQQIGESVLLIKGPQGRINRAIWGPLNTTIISAGEDAVIRIWDSETGKL 180

Query: 619  IKESDKETGHQKTITSLSKSKDESHFLTGSHDKSARLWDIRSLALIKTYVTESPVNAVDI 798
            ++ESDKE+GH+KT+TSL+KS D+SHFLTGS DKSARLWD RSL LIKTYVTE PVNAV +
Sbjct: 181  LQESDKESGHKKTVTSLAKSADDSHFLTGSLDKSARLWDTRSLTLIKTYVTERPVNAVTM 240

Query: 799  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDG 978
            SPLLDHVVIGGGQDAS+VT TD RAGKFEAKFF KILQEEIGGVKGHFGPINALAFNPDG
Sbjct: 241  SPLLDHVVIGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 979  RSFSSGGEDGYIRLHHFDPDYFNIKI 1056
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326


>ref|XP_004136687.1| PREDICTED: eukaryotic translation initiation factor 3 subunit I-like
            [Cucumis sativus] gi|449494685|ref|XP_004159618.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit I-like [Cucumis sativus]
          Length = 326

 Score =  556 bits (1432), Expect = e-156
 Identities = 263/326 (80%), Positives = 296/326 (90%)
 Frame = +1

Query: 79   MRPILMKGHERPLTYLVYNIEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 258
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VW+ADNGERLGTY GHNG VWCCDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWYADNGERLGTYRGHNGAVWCCDV 60

Query: 259  SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 438
            SRDS RLITGSADQT KLW+V+ G QLF+FNF +PAR+VDF VGD +AV+TTD FM+   
Sbjct: 61   SRDSMRLITGSADQTAKLWNVQTGQQLFSFNFDSPARAVDFSVGDKLAVITTDPFMELPS 120

Query: 439  AIHVKRIAQDPSEQSGKSILEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 618
            AIHVKRIA+DPSEQ+G+S+L +K P+G+INRAV+GPLNKTIISAGEDAVVRIWD+ETGKL
Sbjct: 121  AIHVKRIARDPSEQTGESVLLLKGPQGRINRAVWGPLNKTIISAGEDAVVRIWDSETGKL 180

Query: 619  IKESDKETGHQKTITSLSKSKDESHFLTGSHDKSARLWDIRSLALIKTYVTESPVNAVDI 798
            +KESDKE GH+KT+TSL+KS D SHF+TGS DKSA+LWD R+L LIKTYVTE PVNAV +
Sbjct: 181  LKESDKEIGHKKTVTSLTKSSDGSHFITGSLDKSAKLWDTRTLTLIKTYVTERPVNAVTM 240

Query: 799  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDG 978
            SPLLDHVV+GGGQDAS+VT TD RAGKFEAKF+ KILQEEIGGVKGHFGPINALAFNPDG
Sbjct: 241  SPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 979  RSFSSGGEDGYIRLHHFDPDYFNIKI 1056
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326


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