BLASTX nr result

ID: Coptis24_contig00003406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003406
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631559.1| PREDICTED: ser/Thr-rich protein T10 in DGCR ...   121   1e-25
ref|XP_002328132.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|2...   116   3e-24
ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, put...   112   5e-23
ref|XP_003526588.1| PREDICTED: LOW QUALITY PROTEIN: ser/Thr-rich...   110   2e-22

>ref|XP_003631559.1| PREDICTED: ser/Thr-rich protein T10 in DGCR region-like [Vitis
           vinifera] gi|297744476|emb|CBI37738.3| unnamed protein
           product [Vitis vinifera]
          Length = 272

 Score =  121 bits (303), Expect = 1e-25
 Identities = 61/105 (58%), Positives = 77/105 (73%)
 Frame = -3

Query: 594 AERLGRSFKELLDIYGSSEVPVELMVEKLMTDTTKADIHRLPGVRSFEMEYNVSSIFVEF 415
           A RLG +FKELLD YG  E+P E MVEKLM +T K D   LP +   E E+ +SSIFV+ 
Sbjct: 159 ARRLGHNFKELLDKYGEGEIPTEEMVEKLMKNTIKDDEIVLPRIYPPEREHQLSSIFVDT 218

Query: 414 DTPEERYGTRSTTALSVKASGEVNFYEKYLAEEGWKDHAVTFHIE 280
           DTP  RYGTRST+++ V+ASGEVNFYEK+L  E W+++ VT+ IE
Sbjct: 219 DTPLGRYGTRSTSSVCVRASGEVNFYEKHLENETWRENTVTYQIE 263


>ref|XP_002328132.1| predicted protein [Populus trichocarpa] gi|222837647|gb|EEE76012.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  120 bits (301), Expect = 2e-25
 Identities = 58/104 (55%), Positives = 77/104 (74%)
 Frame = -3

Query: 594 AERLGRSFKELLDIYGSSEVPVELMVEKLMTDTTKADIHRLPGVRSFEMEYNVSSIFVEF 415
           A+RLG  FK+LL+ Y  +E+P + M E LMT+T K D   LPG+   E E+ +SSIF+E 
Sbjct: 159 AQRLGHGFKDLLEKYDEAELPTKEMAEILMTNTIKDDESMLPGIYPSEREHQLSSIFIEA 218

Query: 414 DTPEERYGTRSTTALSVKASGEVNFYEKYLAEEGWKDHAVTFHI 283
           DTP  RYGTRST ALSVK+SGEVNFYE+YL ++ WK+H +++ I
Sbjct: 219 DTPLGRYGTRSTCALSVKSSGEVNFYERYLDKDQWKEHTMSYQI 262


>ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|222856428|gb|EEE93975.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  116 bits (291), Expect = 3e-24
 Identities = 57/104 (54%), Positives = 75/104 (72%)
 Frame = -3

Query: 591 ERLGRSFKELLDIYGSSEVPVELMVEKLMTDTTKADIHRLPGVRSFEMEYNVSSIFVEFD 412
           +RLG + K+LL  YG SE+PV+ ++EKLM D  KAD  RLPG+ S + E+N+SSIFVE D
Sbjct: 156 QRLGLNLKDLLGKYGESEIPVKEVLEKLMRDKVKADKSRLPGICSIDWEFNLSSIFVEID 215

Query: 411 TPEERYGTRSTTALSVKASGEVNFYEKYLAEEGWKDHAVTFHIE 280
           TP   YGTRST AL++ A GEV+FYE YL +  WK+  V + I+
Sbjct: 216 TPLGCYGTRSTAALTIGAGGEVSFYEIYLEKNVWKESTVNYRIQ 259


>ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, putative [Ricinus
           communis] gi|223551385|gb|EEF52871.1| Ser/Thr-rich
           protein T10 in DGCR region, putative [Ricinus communis]
          Length = 248

 Score =  112 bits (280), Expect = 5e-23
 Identities = 58/104 (55%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
 Frame = -3

Query: 591 ERLGRSFKELLDIYGSS-EVPVELMVEKLMTDTTKADIHRLPGVRSFEMEYNVSSIFVEF 415
           +RL  +FKE LD YG   E+PVE M+EKLM DT +A+   LPG+ S + E+N+SSIFVE 
Sbjct: 139 QRLKLNFKEQLDTYGGEDEIPVEGMLEKLMRDTVRAEKSGLPGICSLDWEHNLSSIFVEV 198

Query: 414 DTPEERYGTRSTTALSVKASGEVNFYEKYLAEEGWKDHAVTFHI 283
            TP   YGTRSTTAL+V+A+GEV+FYE YL +  WK+  V + I
Sbjct: 199 HTPLGCYGTRSTTALTVRANGEVSFYETYLEDNIWKEKTVNYRI 242


>ref|XP_003526588.1| PREDICTED: LOW QUALITY PROTEIN: ser/Thr-rich protein T10 in DGCR
           region-like [Glycine max]
          Length = 275

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/104 (52%), Positives = 73/104 (70%)
 Frame = -3

Query: 594 AERLGRSFKELLDIYGSSEVPVELMVEKLMTDTTKADIHRLPGVRSFEMEYNVSSIFVEF 415
           A RL  SFKE +  YG  E+PV+ +++KLM D  KAD   LP + S + E+N+SSIFVE 
Sbjct: 159 ALRLEFSFKEHVAKYGEGEIPVKEVIQKLMKDKVKADKSSLPRICSPDWEFNLSSIFVEV 218

Query: 414 DTPEERYGTRSTTALSVKASGEVNFYEKYLAEEGWKDHAVTFHI 283
           +TP   YGTRS+ AL+V++ GE NFYE YL +  WK+HA+ FHI
Sbjct: 219 ETPLGLYGTRSSAALTVRSRGEANFYEVYLDDTKWKEHAIDFHI 262


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