BLASTX nr result

ID: Coptis24_contig00003404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003404
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331738.1| predicted protein [Populus trichocarpa] gi|1...   181   1e-43
ref|XP_002515583.1| conserved hypothetical protein [Ricinus comm...   179   5e-43
gb|AFK43199.1| unknown [Lotus japonicus]                              179   7e-43
ref|XP_002284690.1| PREDICTED: uncharacterized protein LOC100261...   177   2e-42
ref|NP_001238415.1| uncharacterized protein LOC100500202 precurs...   173   3e-41

>ref|XP_002331738.1| predicted protein [Populus trichocarpa] gi|118487434|gb|ABK95545.1|
           unknown [Populus trichocarpa]
           gi|222874264|gb|EEF11395.1| predicted protein [Populus
           trichocarpa]
          Length = 150

 Score =  181 bits (460), Expect = 1e-43
 Identities = 86/142 (60%), Positives = 110/142 (77%), Gaps = 6/142 (4%)
 Frame = +2

Query: 59  KRLAILSLTIFSLLIQSTSQ------TAHDELKANNFPIGLLPTNVLSYTLNKTSGDFSV 220
           K   ++SL +  +   S S+       AH EL    FPIGLLP++V +YT N+TSG+FSV
Sbjct: 3   KLFFLISLILLPITFTSQSEKQKPPTAAHTELTNYGFPIGLLPSSVKNYTFNQTSGEFSV 62

Query: 221 NLGGTCKLTLPPDNYLASYSKKVTGKLVENKIEGLNGIRVRAFYQWWSITGIKSSGDNLV 400
           +LG  CK+TLPPDNYLA+YSK+V+GK+VE +I  L+GIRVRAF++WWSITGI SSGDNLV
Sbjct: 63  DLGSACKITLPPDNYLATYSKRVSGKIVEGRIAELDGIRVRAFFKWWSITGISSSGDNLV 122

Query: 401 FEVGMVSAKYPSKNFDQMPSCQ 466
           FEVGM++AKYPSKNFD+ P C+
Sbjct: 123 FEVGMITAKYPSKNFDESPQCE 144


>ref|XP_002515583.1| conserved hypothetical protein [Ricinus communis]
           gi|223545527|gb|EEF47032.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 154

 Score =  179 bits (454), Expect = 5e-43
 Identities = 90/146 (61%), Positives = 113/146 (77%), Gaps = 10/146 (6%)
 Frame = +2

Query: 59  KRLAILSLTIFSLLI-----QST-----SQTAHDELKANNFPIGLLPTNVLSYTLNKTSG 208
           K L++LSL +  L++     QST        AH EL    FPIGLLP +V++Y LN+TSG
Sbjct: 3   KLLSLLSLLLLLLVLVPLSSQSTIAGNPPSAAHTELTNYGFPIGLLPASVVNYNLNQTSG 62

Query: 209 DFSVNLGGTCKLTLPPDNYLASYSKKVTGKLVENKIEGLNGIRVRAFYQWWSITGIKSSG 388
           DFSVN GG+CK+TLPPDNYLA+YSKKVTGK+V  +I  L+GIRV AF++WWSITGI+SSG
Sbjct: 63  DFSVNFGGSCKITLPPDNYLATYSKKVTGKIVAGRIAELDGIRVWAFFKWWSITGIRSSG 122

Query: 389 DNLVFEVGMVSAKYPSKNFDQMPSCQ 466
           ++LVFEVGMV+AKYPSKNF + P C+
Sbjct: 123 EDLVFEVGMVTAKYPSKNFLESPQCE 148


>gb|AFK43199.1| unknown [Lotus japonicus]
          Length = 156

 Score =  179 bits (453), Expect = 7e-43
 Identities = 82/122 (67%), Positives = 102/122 (83%), Gaps = 1/122 (0%)
 Frame = +2

Query: 104 QSTSQTAHDELKANNFPIGLLP-TNVLSYTLNKTSGDFSVNLGGTCKLTLPPDNYLASYS 280
           +ST  +AH EL    FP+GLLP T VL + +N+TSGDFSV LGG C++TLPPDNY+A+YS
Sbjct: 29  KSTPSSAHIELTNYGFPVGLLPDTTVLGFAVNQTSGDFSVRLGGACRITLPPDNYVATYS 88

Query: 281 KKVTGKLVENKIEGLNGIRVRAFYQWWSITGIKSSGDNLVFEVGMVSAKYPSKNFDQMPS 460
             +TGK+V+ +I  LNGIRVRAF+QWWSITGI+SSGDN+VFEVGMV+AKYPSKNFD  P+
Sbjct: 89  NTITGKIVKGRIAELNGIRVRAFFQWWSITGIRSSGDNIVFEVGMVTAKYPSKNFDDSPA 148

Query: 461 CQ 466
           C+
Sbjct: 149 CE 150


>ref|XP_002284690.1| PREDICTED: uncharacterized protein LOC100261125 isoform 1 [Vitis
           vinifera] gi|359484606|ref|XP_003633129.1| PREDICTED:
           uncharacterized protein LOC100261125 isoform 2 [Vitis
           vinifera] gi|359484608|ref|XP_003633130.1| PREDICTED:
           uncharacterized protein LOC100261125 isoform 3 [Vitis
           vinifera]
          Length = 157

 Score =  177 bits (449), Expect = 2e-42
 Identities = 87/148 (58%), Positives = 107/148 (72%), Gaps = 14/148 (9%)
 Frame = +2

Query: 65  LAILSLTIFSLL--------------IQSTSQTAHDELKANNFPIGLLPTNVLSYTLNKT 202
           L IL L IF +L              + S    AH EL    FP+GLLPTNV+ Y++N+T
Sbjct: 4   LTILPLLIFFILFPHSSSDPNPTSKTLDSNVSAAHAELSNYGFPVGLLPTNVVDYSINQT 63

Query: 203 SGDFSVNLGGTCKLTLPPDNYLASYSKKVTGKLVENKIEGLNGIRVRAFYQWWSITGIKS 382
           SG+FSVNLG +CK TLPPDNYLA+YS K++GK+V   I  L GIRVRAF+QWWSITGI+S
Sbjct: 64  SGEFSVNLGYSCKFTLPPDNYLATYSPKISGKIVHGHIASLAGIRVRAFFQWWSITGIRS 123

Query: 383 SGDNLVFEVGMVSAKYPSKNFDQMPSCQ 466
           SGDNLVFEVG+V+AKYP+KNF + P C+
Sbjct: 124 SGDNLVFEVGVVTAKYPAKNFHETPVCE 151


>ref|NP_001238415.1| uncharacterized protein LOC100500202 precursor [Glycine max]
           gi|255629688|gb|ACU15193.1| unknown [Glycine max]
          Length = 156

 Score =  173 bits (439), Expect = 3e-41
 Identities = 81/122 (66%), Positives = 100/122 (81%), Gaps = 1/122 (0%)
 Frame = +2

Query: 104 QSTSQTAHDELKANNFPIGLLP-TNVLSYTLNKTSGDFSVNLGGTCKLTLPPDNYLASYS 280
           +STS  AH EL  +  P GLLP T VL Y +N+TSGDF+V LGG CK+TLPPDNY+A+YS
Sbjct: 29  KSTSSQAHVELINHGLPAGLLPATTVLGYAVNRTSGDFTVKLGGACKITLPPDNYVATYS 88

Query: 281 KKVTGKLVENKIEGLNGIRVRAFYQWWSITGIKSSGDNLVFEVGMVSAKYPSKNFDQMPS 460
             +TGK+V+ KI  L GIRVRAF++WWSITGI+SSGD++VFEVGMV+AKYPSKNFD  P+
Sbjct: 89  DTITGKIVKGKIAELEGIRVRAFFKWWSITGIRSSGDDIVFEVGMVTAKYPSKNFDDSPA 148

Query: 461 CQ 466
           C+
Sbjct: 149 CE 150


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