BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003395
         (1612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]   472   e-130
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   460   e-127
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]   453   e-125
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   436   e-120
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   435   e-119

>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score =  472 bits (1214), Expect = e-130
 Identities = 230/425 (54%), Positives = 289/425 (68%), Gaps = 2/425 (0%)
 Frame = +1

Query: 4    PTSSWCSQLLH*FHGTPIGGHSGFLRTYKRLQQNFYWPGMKGAIKSYIARCDVCQRNKAE 183
            P S     LL  FH TP+GGHS  LRTYKRL Q FYWP M+ ++  Y+A CDVCQ+ KAE
Sbjct: 905  PGSPLIHCLLREFHDTPMGGHSRILRTYKRLSQQFYWPSMRRSVHQYVAACDVCQKAKAE 964

Query: 184  TISPPGLLNPLPIHDDVWLDLSMDFIDGLPSLNRKTTILVVVDRLSKYAHFTALSHPYTA 363
            T+SP GLL PLPI   VW D++MDFIDGLP  + KT+I+VVVDRLSK AHF A++HPYTA
Sbjct: 965  TMSPAGLLQPLPIPCQVWDDITMDFIDGLPRSDGKTSIMVVVDRLSKSAHFIAIAHPYTA 1024

Query: 364  TTIADVFVRDIVRLHGMPRAIVSDRGPVFISTFWEAFFQMQGTKLCKSSAYHPQTDGQTE 543
             T+A+ FV  +V+LHGMPR+I+SDR PVFIS FW+ F ++ GTKL  +SAYHPQ+DGQTE
Sbjct: 1025 KTLANKFVEGVVKLHGMPRSIISDRDPVFISNFWQEFLKLSGTKLRMTSAYHPQSDGQTE 1084

Query: 544  VTNRTLECYLRCFAGQQPHDWTKWLPWSEWWYNTTYHSAIKMTPFQAVYSRPPPSISAYL 723
            V NR +E YLRCF   +P  W   LPW+E+WYNTTYHS+  MTPFQA+Y RPPP+I +Y 
Sbjct: 1085 VVNRCIEQYLRCFVHHKPRHWNSLLPWAEYWYNTTYHSSTGMTPFQALYGRPPPAIPSYE 1144

Query: 724  PGTTVVHAVDMALRDRDRTLQLLKGHLQSAQARMKVYADSHRTERHFEVNDLVFLRLQPY 903
             G+  +  +D  +  R+  LQ LK HL +A  RMK  AD  R E +FEV D V+LRLQPY
Sbjct: 1145 IGSCPIEELDDQMTARNELLQELKAHLHAANNRMKQAADKKRREVNFEVGDWVYLRLQPY 1204

Query: 904  RQSTAASQSYSKLSPRFYGPFRIVAKIGSVAYKLALLAGCRIHPVFHVSALKLKLGEYVT 1083
            RQ +   ++  KLS R+YGP+ I  +IG VAYKL L  G RIHPVFHVS LK K+GE   
Sbjct: 1205 RQQSVFRRTSHKLSNRYYGPYEIEERIGPVAYKLKLSPGSRIHPVFHVSLLKKKIGEVAI 1264

Query: 1084 PTANLPPLAD--VFAWEPERILDRGIFKNDNKAVTRWLIQWKDHPVEEATWEDHHEFCVR 1257
                LPPL +  V   +P ++L        + + +  L+ W+  P EEATWED  +    
Sbjct: 1265 ANDELPPLTEEGVIRLQPRKVLSTRWVNKGSTSASESLVLWEGLPEEEATWEDSQQLLRS 1324

Query: 1258 FPEFS 1272
            FP  +
Sbjct: 1325 FPNLN 1329


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  460 bits (1183), Expect = e-127
 Identities = 216/416 (51%), Positives = 286/416 (68%), Gaps = 2/416 (0%)
 Frame = +1

Query: 25   QLLH*FHGTPIGGHSGFLRTYKRLQQNFYWPGMKGAIKSYIARCDVCQRNKAETISPPGL 204
            Q+L+  H +P GGHSGF +T  R +  FYW GM+  ++ +I  CD+CQ+NK+E I P GL
Sbjct: 1048 QILYLLHSSPQGGHSGFHKTLHRAKSEFYWEGMRKEVRRFIKECDICQQNKSENIHPAGL 1107

Query: 205  LNPLPIHDDVWLDLSMDFIDGLPSLNRKTTILVVVDRLSKYAHFTALSHPYTATTIADVF 384
            L PLPI   VW D+S+DFI+GLP+    + I+VVVDRLSKYAHF  +SHPYTA+ IA VF
Sbjct: 1108 LQPLPIPTKVWTDISLDFIEGLPNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVF 1167

Query: 385  VRDIVRLHGMPRAIVSDRGPVFISTFWEAFFQMQGTKLCKSSAYHPQTDGQTEVTNRTLE 564
            + +I +LHG+P +IV+DR P F STFW+  F++QGT L  SSAYHPQTDGQTE+ N+ +E
Sbjct: 1168 LANIFKLHGLPNSIVTDRDPTFTSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVE 1227

Query: 565  CYLRCFAGQQPHDWTKWLPWSEWWYNTTYHSAIKMTPFQAVYSRPPPSISAYLPGTTVVH 744
             YLRCF+G +P  W KWLP +EWWYNT  H++ K++PF++VY  PPP +  Y PGTT + 
Sbjct: 1228 QYLRCFSGDKPKGWVKWLPLAEWWYNTNIHASTKLSPFESVYGYPPPKLIPYTPGTTQLQ 1287

Query: 745  AVDMALRDRDRTLQLLKGHLQSAQARMKVYADSHRTERHFEVNDLVFLRLQPYRQSTAAS 924
             V+  L+ RD  +++L+ +LQ AQ RMK +AD   T R F + DLV+LRLQPY+Q +   
Sbjct: 1288 EVENTLKTRDEIIRILRTNLQLAQDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQ 1347

Query: 925  QSYSKLSPRFYGPFRIVAKIGSVAYKLALLAGCRIHPVFHVSALKLKLGEYVTPTANLPP 1104
            +   KLSPRFYGP+R++ KIG+VAY+L L    +IHPVFHVS LK KLGE       LPP
Sbjct: 1348 RRNLKLSPRFYGPYRVLEKIGTVAYRLELPPEAKIHPVFHVSCLKEKLGERHQLVVTLPP 1407

Query: 1105 L--ADVFAWEPERILDRGIFKNDNKAVTRWLIQWKDHPVEEATWEDHHEFCVRFPE 1266
                 V   EPE IL R + K  N AVT  L++WK    +EA+W ++      FP+
Sbjct: 1408 XDKDGVIRXEPEEILHRRLKKKKNHAVTEVLVKWKGLGEDEASWVEYSTLVNEFPD 1463


>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
          Length = 647

 Score =  453 bits (1166), Expect = e-125
 Identities = 228/435 (52%), Positives = 286/435 (65%), Gaps = 2/435 (0%)
 Frame = +1

Query: 4    PTSSWCSQLLH*FHGTPIGGHSGFLRTYKRLQQNFYWPGMKGAIKSYIARCDVCQRNKAE 183
            P S   +QLL  FH +P+GGHSG LRTYKR+ Q FYWP M   +  Y++ CDVCQR KA 
Sbjct: 193  PQSHIPNQLLREFHDSPLGGHSGVLRTYKRIAQQFYWPSMYRMVNEYVSSCDVCQRAKAS 252

Query: 184  TISPPGLLNPLPIHDDVWLDLSMDFIDGLPSLNRKTTILVVVDRLSKYAHFTALSHPYTA 363
            T+SP GLL PLPI   VW D++MDFI+GLP    K TILVVVDRLSK AHF AL+HP++A
Sbjct: 253  TLSPAGLLQPLPIPCQVWDDITMDFIEGLPPSQGKNTILVVVDRLSKSAHFLALTHPFSA 312

Query: 364  TTIADVFVRDIVRLHGMPRAIVSDRGPVFISTFWEAFFQMQGTKLCKSSAYHPQTDGQTE 543
              +A+ FV  +++LHGMP +I+SDR P+FIS FW  FF++ GT+L  SSAYHPQTDGQTE
Sbjct: 313  KMVAEKFVDGVIKLHGMPSSIISDRDPIFISNFWHEFFKLSGTQLKMSSAYHPQTDGQTE 372

Query: 544  VTNRTLECYLRCFAGQQPHDWTKWLPWSEWWYNTTYHSAIKMTPFQAVYSRPPPSISAYL 723
            V NR +E YLRC   QQP  W   L W+++WYN  YH++  M+PFQA+Y RPPP I  Y 
Sbjct: 373  VINRCVEQYLRCLVHQQPRKWYSLLSWADFWYNIAYHASTSMSPFQALYGRPPPMIPHYQ 432

Query: 724  PGTTVVHAVDMALRDRDRTLQLLKGHLQSAQARMKVYADSHRTERHFEVNDLVFLRLQPY 903
             G+++V+ V+  L  RD  L  LK +L  A  RMK  ADS R +  F   DLVFLRL PY
Sbjct: 433  LGSSLVNEVNQNLASRDDLLHQLKLNLHQASNRMKQIADSKRRDIEFNEGDLVFLRLHPY 492

Query: 904  RQSTAASQSYSKLSPRFYGPFRIVAKIGSVAYKLALLAGCRIHPVFHVSALKLKLGEYVT 1083
            RQ T   ++  KL+ RFY PF I  +IG VAY+L L AG RIHPVFHVS LK  +G+   
Sbjct: 493  RQQTVFKRASQKLAHRFYEPFPIEKRIGKVAYQLQLPAGSRIHPVFHVSLLKKTIGDSNA 552

Query: 1084 PTANLPPLAD--VFAWEPERILDRGIFKNDNKAVTRWLIQWKDHPVEEATWEDHHEFCVR 1257
                LPPL D   F  EP  I+D   FK         L++WK+  VE+ATWE+  E   R
Sbjct: 553  CCPTLPPLTDDGAFIIEPTEIIDTRWFKKGGNFFEECLVKWKNLLVEDATWENAAELHDR 612

Query: 1258 FPEFSACGQAVVQRG 1302
            FP+ +   + +V+ G
Sbjct: 613  FPDLNLEDKVLVKVG 627


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  436 bits (1121), Expect = e-120
 Identities = 218/428 (50%), Positives = 283/428 (66%), Gaps = 5/428 (1%)
 Frame = +1

Query: 1    VPTSSWC-SQLLH*FHGTPIGGHSGFLRTYKRLQQNFYWPGMKGAIKSYIARCDVCQRNK 177
            +P+SS    +LL+ +H  P+GGH+G L+TY RL   +YW GM+  +  Y+ +C +CQ+ K
Sbjct: 1163 IPSSSTIIPKLLYEYHDAPMGGHAGELKTYLRLAAEWYWRGMRQEVARYVHQCLICQQQK 1222

Query: 178  AETISPPGLLNPLPIHDDVWLDLSMDFIDGLPSLNRKTTILVVVDRLSKYAHFTALSHPY 357
                 P GLL PLPI   VW D+SMDFI+GLP      TILV+VDRLSKYAHF  L HP+
Sbjct: 1223 VSQQHPRGLLQPLPIPSLVWEDISMDFIEGLPVSKGVDTILVIVDRLSKYAHFLTLRHPF 1282

Query: 358  TATTIADVFVRDIVRLHGMPRAIVSDRGPVFISTFWEAFFQMQGTKLCKSSAYHPQTDGQ 537
            TA  +AD+FV+++VRLHG P +IVSDR  +F+S FW+  F++ GT L +SSAYHPQTDGQ
Sbjct: 1283 TALMVADLFVKEVVRLHGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQTDGQ 1342

Query: 538  TEVTNRTLECYLRCFAGQQPHDWTKWLPWSEWWYNTTYHSAIKMTPFQAVYSRPPPSISA 717
            TE+ NR LE YLRCF G  P  W KWLPW+E+ YNT+ H++ KM+PF+ +Y R PP +  
Sbjct: 1343 TEIVNRALETYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTSTKMSPFKVLYGRDPPHVVR 1402

Query: 718  YLPGTTVVHAVDMALRDRDRTLQLLKGHLQSAQARMKVYADSHRTERHFEVNDLVFLRLQ 897
               G T V +++  L+DRD  +  L+ +L  AQ RMK YAD  RTE  F+V D VFLRLQ
Sbjct: 1403 APKGQTSVESLEAMLQDRDAIIDDLQVNLVRAQQRMKHYADGSRTEVEFQVGDAVFLRLQ 1462

Query: 898  PYRQSTAASQSYSKLSPRFYGPFRIVAKIGSVAYKLALLAGCRIHPVFHVSALKLKLGEY 1077
            PYRQ + A + + KL+PRFYGPF ++ +IG+ AYKL L    +IHPVFHVS LK  +G  
Sbjct: 1463 PYRQRSLAKRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKVVGNT 1522

Query: 1078 -VTPTANLPPLADV---FAWEPERILDRGIFKNDNKAVTRWLIQWKDHPVEEATWEDHHE 1245
             V PT  +PP  DV      EPE +LD    +   +  T  LI+WK  P  EATWED   
Sbjct: 1523 PVLPT--IPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATWEDMSP 1580

Query: 1246 FCVRFPEF 1269
              +RFP F
Sbjct: 1581 IHLRFPSF 1588


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  435 bits (1118), Expect = e-119
 Identities = 210/412 (50%), Positives = 285/412 (69%), Gaps = 1/412 (0%)
 Frame = +1

Query: 43   HGTPIGGHSGFLRTYKRLQQNFYWPGMKGAIKSYIARCDVCQRNKAETISPPGLLNPLPI 222
            HG+ +GGHSG   T++R++  FYW GM   I++YI  C  CQ+ K++  + PGLL PLPI
Sbjct: 1089 HGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPLPI 1148

Query: 223  HDDVWLDLSMDFIDGLPSLNRKTTILVVVDRLSKYAHFTALSHPYTATTIADVFVRDIVR 402
             D +W ++SMDFI+GLP    KT I+VVVDRLSK AHF ALSHPY+A T+A  ++ ++ +
Sbjct: 1149 PDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFK 1208

Query: 403  LHGMPRAIVSDRGPVFISTFWEAFFQMQGTKLCKSSAYHPQTDGQTEVTNRTLECYLRCF 582
            LHG P +IVSDR  VF S FW  FF +QG  L  +SAYHPQ+DGQTEV NR LE YLRC 
Sbjct: 1209 LHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRCM 1268

Query: 583  AGQQPHDWTKWLPWSEWWYNTTYHSAIKMTPFQAVYSRPPPSISAYLPGTTVVHAVDMAL 762
               +P  W+KWL  +E+WYNT YHS+ +MTPF+ VY + PP    YLPG + V  V  +L
Sbjct: 1269 CHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLPGESKVAVVARSL 1328

Query: 763  RDRDRTLQLLKGHLQSAQARMKVYADSHRTERHFEVNDLVFLRLQPYRQSTAASQSYSKL 942
            ++R+  L  LK HL  AQ RMK +AD HRTER FE+ D V+++LQPYRQ +   ++  KL
Sbjct: 1329 QEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQKL 1388

Query: 943  SPRFYGPFRIVAKIGSVAYKLALLAGCRIHPVFHVSALKLKLGEYVTPTANLPP-LADVF 1119
            SP+++GP++I+ + G VAYKLAL +  ++HPVFHVS LK+ +G  V+ T +LP  + DVF
Sbjct: 1389 SPKYFGPYKIIDRCGEVAYKLALPSYSQVHPVFHVSQLKVLVGN-VSTTVHLPSVMQDVF 1447

Query: 1120 AWEPERILDRGIFKNDNKAVTRWLIQWKDHPVEEATWEDHHEFCVRFPEFSA 1275
               PE++++R +     KAVT+ L++W + P+EEATWE   +    FPEF A
Sbjct: 1448 EKVPEKVVERKMVNRQGKAVTKVLVKWSNEPLEEATWEFLFDLQKTFPEFEA 1499