BLASTX nr result

ID: Coptis24_contig00003385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003385
         (1871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624207.1| Dehydrogenase/reductase SDR family member [M...   440   e-121
ref|XP_003552459.1| PREDICTED: dehydrogenase/reductase SDR famil...   431   e-118
ref|XP_002276273.1| PREDICTED: dehydrogenase/reductase SDR famil...   430   e-118
ref|XP_002328993.1| predicted protein [Populus trichocarpa] gi|2...   429   e-117
gb|ACU19184.1| unknown [Glycine max]                                  428   e-117

>ref|XP_003624207.1| Dehydrogenase/reductase SDR family member [Medicago truncatula]
            gi|355499222|gb|AES80425.1| Dehydrogenase/reductase SDR
            family member [Medicago truncatula]
          Length = 318

 Score =  440 bits (1132), Expect = e-121
 Identities = 213/283 (75%), Positives = 250/283 (88%)
 Frame = -3

Query: 1146 RRQLVQE*VFWITGASRGIGKVLAEQLSGLGAKLVISARNQAELEGVKAKLVGKHASEVR 967
            + +L+++ VFWITGASRGIG++LA+QL+ LGAKL++SAR++A+L  VK++L GKHA E +
Sbjct: 34   KHELIEDKVFWITGASRGIGEILAQQLASLGAKLILSARDEADLNRVKSQLKGKHADEAK 93

Query: 966  ILPMDLASGEESLREAVQRAESFFPDAGVDYMIHNAAYERPKSSALDVTEESLKATFEVN 787
            ILP+DL SGE+SLR+ V  AES FPD+GVDYMIHNAAYERPKSS LDVTEESLKATF+VN
Sbjct: 94   ILPLDLTSGEDSLRKVVDEAESLFPDSGVDYMIHNAAYERPKSSVLDVTEESLKATFDVN 153

Query: 786  VLGTITLTRLLTPCMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSELY 607
            V GTITLTRLLTP MLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSEL 
Sbjct: 154  VFGTITLTRLLTPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSELC 213

Query: 606  QKGIKVTIVCPGPIETSKNVGANSSVLKRVSSERCAELTVVAASHGLKEAWISDQPVLII 427
            QKGI+VT+VCPGPIET+ N G+     KRVS+E+C ELT++AA+HGLKEAWIS QPVL +
Sbjct: 214  QKGIQVTVVCPGPIETANNSGSQVPSEKRVSAEKCVELTIIAATHGLKEAWISYQPVLAV 273

Query: 426  MYLIQYMPSIGYWIMDKIGGNRVEAAAQKGNTYSWKLLFGYKK 298
            MYL+QYMP+IGYW+MDK+G NRVEAA +KGN YS  LLFG KK
Sbjct: 274  MYLVQYMPTIGYWLMDKVGKNRVEAAKEKGNAYSLSLLFGKKK 316


>ref|XP_003552459.1| PREDICTED: dehydrogenase/reductase SDR family member 7-like [Glycine
            max]
          Length = 319

 Score =  431 bits (1107), Expect = e-118
 Identities = 212/284 (74%), Positives = 250/284 (88%), Gaps = 1/284 (0%)
 Frame = -3

Query: 1146 RRQLVQE*VFWITGASRGIGKVLAEQLSGLGAKLVISARNQAELEGVKAKLVGKHA-SEV 970
            +RQ +++ V WITGASRGIG++LA+Q + LGAKL+ISARN+AEL  V+ +L GKHA  +V
Sbjct: 34   KRQEIEDKVVWITGASRGIGEILAKQFASLGAKLIISARNEAELNRVRTQLKGKHAPDDV 93

Query: 969  RILPMDLASGEESLREAVQRAESFFPDAGVDYMIHNAAYERPKSSALDVTEESLKATFEV 790
            +ILP+DL+SGE+SLR AV++AESFFPD+GVDYM+HNAA+ERPK+S LDVTEE LKATF+V
Sbjct: 94   KILPLDLSSGEDSLRIAVEKAESFFPDSGVDYMVHNAAFERPKTSILDVTEEGLKATFDV 153

Query: 789  NVLGTITLTRLLTPCMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSEL 610
            NVLGTITLT+LL P ML+RG GHFVVMSSAAGKTPAPGQAVYSASKYALNGYFH+LRSEL
Sbjct: 154  NVLGTITLTKLLAPFMLKRGHGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHTLRSEL 213

Query: 609  YQKGIKVTIVCPGPIETSKNVGANSSVLKRVSSERCAELTVVAASHGLKEAWISDQPVLI 430
             QKGI+VT+VCPGPIETS N G+     KRV SERCAELT++AA+HGLKEAWIS QPVL 
Sbjct: 214  CQKGIQVTVVCPGPIETSNNAGSRVPSEKRVPSERCAELTIIAATHGLKEAWISYQPVLA 273

Query: 429  IMYLIQYMPSIGYWIMDKIGGNRVEAAAQKGNTYSWKLLFGYKK 298
            +MYL+QYMP+IGYW+MDKIG +RVEAA QKGNTYS  LL G KK
Sbjct: 274  VMYLVQYMPTIGYWVMDKIGKSRVEAAEQKGNTYSLSLLLGKKK 317


>ref|XP_002276273.1| PREDICTED: dehydrogenase/reductase SDR family member 7 [Vitis
            vinifera] gi|297735239|emb|CBI17601.3| unnamed protein
            product [Vitis vinifera]
          Length = 318

 Score =  430 bits (1106), Expect = e-118
 Identities = 215/284 (75%), Positives = 252/284 (88%), Gaps = 1/284 (0%)
 Frame = -3

Query: 1146 RRQLVQE*VFWITGASRGIGKVLAEQLSGLGAKLVISARNQAELEGVKAKLVGKHA-SEV 970
            +RQ +++ V WITGASRGIG+VLA+QL+GLGAKL++SARN+ ELE VK +L GKHA  EV
Sbjct: 35   KRQEIEDKVVWITGASRGIGEVLAKQLAGLGAKLILSARNEVELERVKQQLRGKHAPGEV 94

Query: 969  RILPMDLASGEESLREAVQRAESFFPDAGVDYMIHNAAYERPKSSALDVTEESLKATFEV 790
             ILP+DLA GE+SLREAV++AESFF  AGVDYMIHNAAYERPK+SA+DVTEESLKAT  V
Sbjct: 95   EILPLDLAGGEDSLREAVEKAESFFSGAGVDYMIHNAAYERPKASAVDVTEESLKATLNV 154

Query: 789  NVLGTITLTRLLTPCMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSEL 610
            NV+GTI+LT+LL P ML+RG+GHFVVMSSAAGKTPAPGQAVYSASKYALNGYFH+LRSEL
Sbjct: 155  NVIGTISLTQLLAPFMLKRGRGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHTLRSEL 214

Query: 609  YQKGIKVTIVCPGPIETSKNVGANSSVLKRVSSERCAELTVVAASHGLKEAWISDQPVLI 430
             QKGIKVT+VCPGPIETS   G+ +S  +RVSSERCAELT++AA+HGLKE WIS QPVL 
Sbjct: 215  CQKGIKVTVVCPGPIETSN--GSKASTERRVSSERCAELTIIAATHGLKEVWISCQPVLA 272

Query: 429  IMYLIQYMPSIGYWIMDKIGGNRVEAAAQKGNTYSWKLLFGYKK 298
            +MYL+QYMP+IG+W+MDK+G NRVEAA QKG+TYS  LLFG KK
Sbjct: 273  VMYLVQYMPTIGFWLMDKVGANRVEAAKQKGSTYSLGLLFGKKK 316


>ref|XP_002328993.1| predicted protein [Populus trichocarpa] gi|222839227|gb|EEE77578.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  429 bits (1102), Expect = e-117
 Identities = 214/289 (74%), Positives = 251/289 (86%), Gaps = 6/289 (2%)
 Frame = -3

Query: 1146 RRQLVQE*VFWITGASRGIGKVLAEQLSGLGAKLVISARNQAELEGVKAKLVGKHA-SEV 970
            +R+ +++ V WITGASRGIG+VLA+QL+ LGAKL++S+RN+AELE VK +L GKHA  EV
Sbjct: 34   KREEIEDKVVWITGASRGIGEVLAKQLASLGAKLILSSRNEAELERVKNQLTGKHAPGEV 93

Query: 969  RILPMDLASGEESLREAVQRAESFFPDAGVDYMIHNAAYERPKSSALDVTEESLKATFEV 790
            +I+P+DLASGEE L+EAV++AESFF  AGVDYMIHNAAYERPKS+ALDV EESLKATF +
Sbjct: 94   KIIPLDLASGEEFLKEAVEKAESFFSGAGVDYMIHNAAYERPKSTALDVNEESLKATFNI 153

Query: 789  NVLGTITLTRLLTPCMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSEL 610
            NVLG I+LTRLL   ML RG+GHFVVMSSAAGKTP PGQA+YSASK+ALNGYFHSLRSEL
Sbjct: 154  NVLGPISLTRLLASSMLSRGRGHFVVMSSAAGKTPTPGQAIYSASKFALNGYFHSLRSEL 213

Query: 609  YQKGIKVTIVCPGPIETSKNVGANSSVLK-----RVSSERCAELTVVAASHGLKEAWISD 445
             QKGIKVTIVCPGPIETS   G+ +S  K     RVSSERCAELT++AA+HGLKE WISD
Sbjct: 214  CQKGIKVTIVCPGPIETSNGFGSTTSGKKGTFERRVSSERCAELTIIAATHGLKEVWISD 273

Query: 444  QPVLIIMYLIQYMPSIGYWIMDKIGGNRVEAAAQKGNTYSWKLLFGYKK 298
            QPVL ++YL+QYMP++GYW+MDKIGGNR+ AAAQKGNTYS  LLFG KK
Sbjct: 274  QPVLAVLYLVQYMPTVGYWLMDKIGGNRLAAAAQKGNTYSLSLLFGKKK 322


>gb|ACU19184.1| unknown [Glycine max]
          Length = 319

 Score =  428 bits (1100), Expect = e-117
 Identities = 211/284 (74%), Positives = 249/284 (87%), Gaps = 1/284 (0%)
 Frame = -3

Query: 1146 RRQLVQE*VFWITGASRGIGKVLAEQLSGLGAKLVISARNQAELEGVKAKLVGKHA-SEV 970
            +RQ +++ V WITGASRGIG++LA+Q + LGAKL+ISARN+AEL  V+ +L GKHA  +V
Sbjct: 34   KRQEIEDKVVWITGASRGIGEILAKQFASLGAKLIISARNEAELNRVRTQLKGKHAPDDV 93

Query: 969  RILPMDLASGEESLREAVQRAESFFPDAGVDYMIHNAAYERPKSSALDVTEESLKATFEV 790
            +ILP+DL+SGE+SL+ AV +AESFFPD+GVDYM+HNAA+ERPK+S LDVTEE LKATF+V
Sbjct: 94   KILPLDLSSGEDSLKIAVGKAESFFPDSGVDYMVHNAAFERPKTSILDVTEEGLKATFDV 153

Query: 789  NVLGTITLTRLLTPCMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSEL 610
            NVLGTITLT+LL P ML+RG GHFVVMSSAAGKTPAPGQAVYSASKYALNGYFH+LRSEL
Sbjct: 154  NVLGTITLTKLLAPFMLKRGHGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHTLRSEL 213

Query: 609  YQKGIKVTIVCPGPIETSKNVGANSSVLKRVSSERCAELTVVAASHGLKEAWISDQPVLI 430
             QKGI+VT+VCPGPIETS N G+     KRV SERCAELT++AA+HGLKEAWIS QPVL 
Sbjct: 214  CQKGIQVTVVCPGPIETSNNAGSRVPSEKRVPSERCAELTIIAATHGLKEAWISYQPVLA 273

Query: 429  IMYLIQYMPSIGYWIMDKIGGNRVEAAAQKGNTYSWKLLFGYKK 298
            +MYL+QYMP+IGYW+MDKIG +RVEAA QKGNTYS  LL G KK
Sbjct: 274  VMYLVQYMPTIGYWVMDKIGKSRVEAAEQKGNTYSLSLLLGKKK 317


Top