BLASTX nr result

ID: Coptis24_contig00003380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003380
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35953.3| unnamed protein product [Vitis vinifera]              185   2e-44
emb|CAN78642.1| hypothetical protein VITISV_031741 [Vitis vinifera]   182   9e-44
ref|XP_003597603.1| hypothetical protein MTR_2g100060 [Medicago ...   179   1e-42
ref|XP_004146821.1| PREDICTED: uncharacterized protein LOC101205...   176   8e-42
ref|XP_002327437.1| predicted protein [Populus trichocarpa] gi|2...   173   5e-41

>emb|CBI35953.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  185 bits (469), Expect = 2e-44
 Identities = 127/315 (40%), Positives = 168/315 (53%), Gaps = 12/315 (3%)
 Frame = -2

Query: 967 HLSVAFIISPLFTSPPSTLD---FLPN---FKKKLTKN----MTERVYPSAKPNINPPPQ 818
           HLS++F    L +  P+TL+   FLP+   F    T      MT+RVYP +  +   PPQ
Sbjct: 32  HLSLSFHFL-LLSHVPNTLNSPFFLPSKHPFSFSQTSPNQTAMTDRVYPKSTAH---PPQ 87

Query: 817 XXXXXXXXXXXXNPSFPATKAQLYGAXXXXXXXXXXXXXXXRGCCCCVFXXXXXXXXXXX 638
                         SFPATKAQLYGA               R C CC++           
Sbjct: 88  PLNGSAGTN-----SFPATKAQLYGATRPAYRPQPQRRSRSRCCSCCLWFTFVILSILVL 142

Query: 637 XXXXXXXAVFWVLYHPQRPSFSIQTLRITQFNITTPKGSTSPTLNSKLDLSVTTRNPNKK 458
                   +F+VLY P RPSF++ +LRI+QFN+T  K      L SKLDLS+T RNPNKK
Sbjct: 143 AAIASA--IFYVLYRPHRPSFAVTSLRISQFNVTATK------LTSKLDLSITARNPNKK 194

Query: 457 LLFIYNPITVS--MFSNXXXXXXXXXXXXVHGTKNTTSLKALVSSTGKDLDSDAVKSLNT 284
           L+FIY+P TVS    S+            VHGTKNTTS K L+SST + LDS ++ +L +
Sbjct: 195 LVFIYDPTTVSAATSSSDVSVGTGTIPAFVHGTKNTTSFKVLISSTSETLDSSSITALKS 254

Query: 283 DLKKKNALPLVIKLETKVKVKFGSFKTEKVRIKVVCQGIEXXXXXXXXXXXXXXSTAGGD 104
           DLK K +LPL  +L+TKVKVK G  KT KV+I+V C GI+                +  +
Sbjct: 255 DLKSK-SLPLKFQLDTKVKVKVGGLKTNKVKIRVTCDGIK----ATIPAGKSPGKASTEN 309

Query: 103 SKCKVKLQFKIWRWT 59
            KC+V ++ K+W+WT
Sbjct: 310 VKCEVDIRVKVWKWT 324


>emb|CAN78642.1| hypothetical protein VITISV_031741 [Vitis vinifera]
          Length = 253

 Score =  182 bits (463), Expect = 9e-44
 Identities = 114/273 (41%), Positives = 149/273 (54%), Gaps = 2/273 (0%)
 Frame = -2

Query: 871 MTERVYPSAKPNINPPPQXXXXXXXXXXXXNPSFPATKAQLYGAXXXXXXXXXXXXXXXR 692
           MT+RVYP +  +   PPQ              SFPATKAQLYGA               R
Sbjct: 1   MTDRVYPKSTAH---PPQPLNGSAGTN-----SFPATKAQLYGATRPAYRPQPQRRSRSR 52

Query: 691 GCCCCVFXXXXXXXXXXXXXXXXXXAVFWVLYHPQRPSFSIQTLRITQFNITTPKGSTSP 512
            C CC++                   +F+VLY P RPSF++ +LRI+QFN+T  K     
Sbjct: 53  CCSCCLWFTFVILSILVLAAIASA--IFYVLYRPHRPSFAVTSLRISQFNVTATK----- 105

Query: 511 TLNSKLDLSVTTRNPNKKLLFIYNPITVS--MFSNXXXXXXXXXXXXVHGTKNTTSLKAL 338
            L SKLDLS+T RNPNKKL+FIY+P TVS    S+            VHGTKNTTS K L
Sbjct: 106 -LTSKLDLSITARNPNKKLVFIYDPTTVSAATSSSDVSVGTGTIPAFVHGTKNTTSFKVL 164

Query: 337 VSSTGKDLDSDAVKSLNTDLKKKNALPLVIKLETKVKVKFGSFKTEKVRIKVVCQGIEXX 158
           +SST + LDS ++ +L +DLK K +LPL  +L+TKVKVK G  KT KV+I+V C GI+  
Sbjct: 165 ISSTSETLDSSSITALKSDLKSK-SLPLKFQLDTKVKVKVGGLKTNKVKIRVTCDGIK-- 221

Query: 157 XXXXXXXXXXXXSTAGGDSKCKVKLQFKIWRWT 59
                         +  + KC+V ++ K+W+WT
Sbjct: 222 --ATIPAGKSPGKASTENVKCEVDIRVKVWKWT 252


>ref|XP_003597603.1| hypothetical protein MTR_2g100060 [Medicago truncatula]
           gi|124360377|gb|ABN08390.1| Harpin-induced 1 [Medicago
           truncatula] gi|355486651|gb|AES67854.1| hypothetical
           protein MTR_2g100060 [Medicago truncatula]
          Length = 260

 Score =  179 bits (453), Expect = 1e-42
 Identities = 102/271 (37%), Positives = 140/271 (51%)
 Frame = -2

Query: 871 MTERVYPSAKPNINPPPQXXXXXXXXXXXXNPSFPATKAQLYGAXXXXXXXXXXXXXXXR 692
           M +RVYP+AKP  N                NPSFPATKAQLYGA               R
Sbjct: 1   MADRVYPAAKPITN-----GNGNGNGVSAANPSFPATKAQLYGATRPTYRPQPHHRRTRR 55

Query: 691 GCCCCVFXXXXXXXXXXXXXXXXXXAVFWVLYHPQRPSFSIQTLRITQFNITTPKGSTSP 512
            CCC  F                    F+++Y P RPSF++ +L+++  N+T+     S 
Sbjct: 56  RCCCTFFFWFFLILLILLLLLGVTGTAFYLIYRPHRPSFTVTSLKLSYLNLTS-----SS 110

Query: 511 TLNSKLDLSVTTRNPNKKLLFIYNPITVSMFSNXXXXXXXXXXXXVHGTKNTTSLKALVS 332
           TLNSK ++++T +NPNK + F+Y P T+++ SN             HG KNTT LK+ +S
Sbjct: 111 TLNSKFNVNITAKNPNKHITFVYQPTTITILSNNINIGEGTIPSFKHGKKNTTLLKSSIS 170

Query: 331 STGKDLDSDAVKSLNTDLKKKNALPLVIKLETKVKVKFGSFKTEKVRIKVVCQGIEXXXX 152
           STG  L+S+A   L  ++K KN L L +KL+TKVK K G  KT  V I+V C G+     
Sbjct: 171 STGLALESEASTELKKNMKSKNGLALKVKLDTKVKAKMGKMKTPNVGIRVTCDGVRVHVP 230

Query: 151 XXXXXXXXXXSTAGGDSKCKVKLQFKIWRWT 59
                     ST+  + KC V ++FKIW+WT
Sbjct: 231 VVGSKKPVTASTS--NVKCDVDVRFKIWKWT 259


>ref|XP_004146821.1| PREDICTED: uncharacterized protein LOC101205214 [Cucumis sativus]
           gi|449522930|ref|XP_004168478.1| PREDICTED:
           uncharacterized LOC101205214 [Cucumis sativus]
          Length = 259

 Score =  176 bits (446), Expect = 8e-42
 Identities = 111/277 (40%), Positives = 146/277 (52%), Gaps = 6/277 (2%)
 Frame = -2

Query: 871 MTERVYPSAKP-----NINPPPQXXXXXXXXXXXXNPSFPATKAQLYGAXXXXXXXXXXX 707
           MT+RV+P+A       N  PP                 FPATK+QLYGA           
Sbjct: 1   MTDRVHPNAAAAAAASNGAPPAPPKTAP----------FPATKSQLYGASRPAYRPQPHH 50

Query: 706 XXXXR-GCCCCVFXXXXXXXXXXXXXXXXXXAVFWVLYHPQRPSFSIQTLRITQFNITTP 530
                  CCC V                   AV +++Y P RPSFS+  ++++QFNIT+ 
Sbjct: 51  RRRHSRSCCCSVCLWLSLTIILLIFLLAIASAVVYLIYRPHRPSFSVSAVKLSQFNITS- 109

Query: 529 KGSTSPTLNSKLDLSVTTRNPNKKLLFIYNPITVSMFSNXXXXXXXXXXXXVHGTKNTTS 350
               S  LNSK DL+V+TRNPNKKL+F YNP+++S+FSN            VH TKNTT 
Sbjct: 110 ----SSLLNSKFDLNVSTRNPNKKLVFTYNPVSISIFSNEIDIGDGVLPGFVHETKNTTL 165

Query: 349 LKALVSSTGKDLDSDAVKSLNTDLKKKNALPLVIKLETKVKVKFGSFKTEKVRIKVVCQG 170
           LK  V S G+ LDS +  +L + +K K  LPL I+L+TKVK+K G+ KT K+ I+V C G
Sbjct: 166 LKTSVISKGQQLDSSSESTLKSSMKSKKGLPLQIQLDTKVKLKMGALKTPKIGIRVTCDG 225

Query: 169 IEXXXXXXXXXXXXXXSTAGGDSKCKVKLQFKIWRWT 59
           I               ST+G  +KCKV L+ KIW+WT
Sbjct: 226 IS--VNVPTGKSPATASTSG--AKCKVDLRIKIWKWT 258


>ref|XP_002327437.1| predicted protein [Populus trichocarpa]
           gi|224148106|ref|XP_002336592.1| predicted protein
           [Populus trichocarpa] gi|118488541|gb|ABK96083.1|
           unknown [Populus trichocarpa]
           gi|222835991|gb|EEE74412.1| predicted protein [Populus
           trichocarpa] gi|222836267|gb|EEE74688.1| predicted
           protein [Populus trichocarpa]
          Length = 266

 Score =  173 bits (439), Expect = 5e-41
 Identities = 106/275 (38%), Positives = 141/275 (51%), Gaps = 4/275 (1%)
 Frame = -2

Query: 871 MTERVYPSAKPNIN--PPPQXXXXXXXXXXXXNPSFPATKAQLYGAXXXXXXXXXXXXXX 698
           MT+RVYPS KP  N                  NPSFPATKAQLYGA              
Sbjct: 1   MTDRVYPSTKPATNGTAATNPSFPATNGTAATNPSFPATKAQLYGATRPTYRPQPNRKRS 60

Query: 697 XRGCCCCVFXXXXXXXXXXXXXXXXXXAVFWVLYHPQRPSFSIQTLRITQFNITTPKGST 518
              CC CV                    ++ VLY P RPSF +  L I+  N+T+     
Sbjct: 61  RSCCCACVLWTTAVIFILIVLAVIAGAIIY-VLYRPHRPSFDVSGLSISSLNLTS----- 114

Query: 517 SPTLNSKLDLSVTTRNPNKKLLFIYNPITVSMFS--NXXXXXXXXXXXXVHGTKNTTSLK 344
           +  L + ++L++T RNPNKKL++ YNPIT+S+ +  +            VHGTKNTT L+
Sbjct: 115 ASHLTTNINLNITARNPNKKLVYTYNPITISVTTERDDIVVGSGSLPSFVHGTKNTTFLR 174

Query: 343 ALVSSTGKDLDSDAVKSLNTDLKKKNALPLVIKLETKVKVKFGSFKTEKVRIKVVCQGIE 164
           A ++S+G  LD  +   L  DLK KN + L ++LETKVKVK G  KT K RI+V CQGI+
Sbjct: 175 AAITSSGVQLDDVSAGKLKADLKSKNGVALKLELETKVKVKMGGLKTPKARIRVTCQGIK 234

Query: 163 XXXXXXXXXXXXXXSTAGGDSKCKVKLQFKIWRWT 59
                         + +  ++KCKV L+ KIW+WT
Sbjct: 235 ----ATVPSGKKATTASVSNAKCKVDLRIKIWKWT 265


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