BLASTX nr result

ID: Coptis24_contig00003376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003376
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003572142.1| PREDICTED: iron-sulfur assembly protein IscA...   199   5e-49
ref|NP_001237356.1| uncharacterized protein LOC100527785 [Glycin...   198   1e-48
gb|EAZ06779.1| hypothetical protein OsI_29023 [Oryza sativa Indi...   198   1e-48
gb|AFK37566.1| unknown [Lotus japonicus]                              197   1e-48
ref|XP_004152897.1| PREDICTED: iron-sulfur assembly protein IscA...   197   2e-48

>ref|XP_003572142.1| PREDICTED: iron-sulfur assembly protein IscA-like 2,
           mitochondrial-like [Brachypodium distachyon]
          Length = 231

 Score =  199 bits (506), Expect = 5e-49
 Identities = 100/147 (68%), Positives = 118/147 (80%), Gaps = 5/147 (3%)
 Frame = -2

Query: 707 IHRLTALMTNRIKQNHKILTYSSS--AAVTVDPQSSEPVCMTDNCIRRLKELHDKET--- 543
           +  L AL+  R++ NH++L  S++  A+ +  P   E V MT+ C+RRLKELH KE    
Sbjct: 85  LRHLAALLNGRLRANHRLLASSTAERASASASPAEPEAVLMTEGCVRRLKELHAKEPSSE 144

Query: 542 GKMLRLSVETGGCSGFQYAFLLDDKSNSDDRIFEKDGVKLVVDNISYDFVKGATVDYVEE 363
           GKMLR+SVE GGCSGFQY+F LD+K NSDDR+FEKDGVKLVVD+ISYDFVKGATVDY EE
Sbjct: 145 GKMLRVSVEAGGCSGFQYSFSLDNKENSDDRVFEKDGVKLVVDDISYDFVKGATVDYEEE 204

Query: 362 LIRSAFVVTENPSAVGGCSCKSSFMVK 282
           LIRSAFVV+ NPSAVGGCSCKSSFMVK
Sbjct: 205 LIRSAFVVSTNPSAVGGCSCKSSFMVK 231


>ref|NP_001237356.1| uncharacterized protein LOC100527785 [Glycine max]
           gi|255633204|gb|ACU16958.1| unknown [Glycine max]
          Length = 156

 Score =  198 bits (503), Expect = 1e-48
 Identities = 102/155 (65%), Positives = 119/155 (76%), Gaps = 12/155 (7%)
 Frame = -2

Query: 710 LIHRLTALMTNRIKQNHKILTYSSSAAV---------TVDPQSSEPVCMTDNCIRRLKEL 558
           +I  L   +  R + NH ++  SSS++          T  P SSEPV +T NC+RR+KEL
Sbjct: 1   MIRSLALHLAARFRHNHNLVRLSSSSSAASASTLHHATPSPSSSEPVHITQNCVRRMKEL 60

Query: 557 HDKET---GKMLRLSVETGGCSGFQYAFLLDDKSNSDDRIFEKDGVKLVVDNISYDFVKG 387
              E+   GKMLRLSVETGGCSGFQY F LD++ NSDD++FE++GVKLVVDNISYDFVKG
Sbjct: 61  EGSESSTDGKMLRLSVETGGCSGFQYVFNLDNRINSDDKVFEREGVKLVVDNISYDFVKG 120

Query: 386 ATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 282
           ATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK
Sbjct: 121 ATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 155


>gb|EAZ06779.1| hypothetical protein OsI_29023 [Oryza sativa Indica Group]
          Length = 166

 Score =  198 bits (503), Expect = 1e-48
 Identities = 106/155 (68%), Positives = 121/155 (78%), Gaps = 13/155 (8%)
 Frame = -2

Query: 710 LIHRLTALMTNRIKQNHKILTYS---SSAAVTVDPQSSEP-------VCMTDNCIRRLKE 561
           L+ R+ AL+  R++ +H++L+ S   SSAA     ++S P       V MTD CIRRLKE
Sbjct: 11  LLRRVAALLGGRVRASHRLLSSSPSSSSAAAAATERASPPSPADPDTVHMTDGCIRRLKE 70

Query: 560 LHDKET---GKMLRLSVETGGCSGFQYAFLLDDKSNSDDRIFEKDGVKLVVDNISYDFVK 390
           LH KE    GKMLRLSVE GGCSGFQY+F LDDK NSDDRIFEKDGVKLVVD++SYDFVK
Sbjct: 71  LHAKEPPSEGKMLRLSVEAGGCSGFQYSFSLDDKKNSDDRIFEKDGVKLVVDDVSYDFVK 130

Query: 389 GATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMV 285
           GATVDY EELIRSAFVV+ NPSAVGGCSCKSSFMV
Sbjct: 131 GATVDYEEELIRSAFVVSTNPSAVGGCSCKSSFMV 165


>gb|AFK37566.1| unknown [Lotus japonicus]
          Length = 161

 Score =  197 bits (502), Expect = 1e-48
 Identities = 106/157 (67%), Positives = 121/157 (77%), Gaps = 12/157 (7%)
 Frame = -2

Query: 716 SFLIHRLTALMTNRIKQNHKILTYSSSA-------AVTVDPQSS--EPVCMTDNCIRRLK 564
           S L  RL   +  R +QN K+ ++SSS+       A T    SS  EPV MT+NC+RR+K
Sbjct: 4   SSLFRRLAPSLAARFRQNQKLTSFSSSSSSSVLHDATTSSSSSSHVEPVHMTENCLRRMK 63

Query: 563 ELHDKETG---KMLRLSVETGGCSGFQYAFLLDDKSNSDDRIFEKDGVKLVVDNISYDFV 393
           EL   E+    K LRLSVETGGCSGFQYAF LDD+ NSDDR+FE++G+KLVVDNISYDFV
Sbjct: 64  ELEASESATAPKTLRLSVETGGCSGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDFV 123

Query: 392 KGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 282
           KGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK
Sbjct: 124 KGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 160


>ref|XP_004152897.1| PREDICTED: iron-sulfur assembly protein IscA-like 2,
           mitochondrial-like [Cucumis sativus]
           gi|449505888|ref|XP_004162595.1| PREDICTED: iron-sulfur
           assembly protein IscA-like 2, mitochondrial-like
           [Cucumis sativus]
          Length = 157

 Score =  197 bits (501), Expect = 2e-48
 Identities = 102/151 (67%), Positives = 118/151 (78%), Gaps = 8/151 (5%)
 Frame = -2

Query: 710 LIHRLTALMTNRIKQNHKILTYSSSAAVTVDPQSSEP--------VCMTDNCIRRLKELH 555
           LI R+T  +  RIK+N ++L+ S+SA     P S  P        + MTD+CIRR+KEL 
Sbjct: 6   LIQRVTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRRMKELQ 65

Query: 554 DKETGKMLRLSVETGGCSGFQYAFLLDDKSNSDDRIFEKDGVKLVVDNISYDFVKGATVD 375
           D +  KMLRLSVETGGCSGFQY F LD K+N DDRI+EK+GVKLVVDNISYDFVKGAT+D
Sbjct: 66  DPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVKGATID 125

Query: 374 YVEELIRSAFVVTENPSAVGGCSCKSSFMVK 282
           YVEELIRSAFVV+ NPSAVGGCSCKSSFMVK
Sbjct: 126 YVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 156


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