BLASTX nr result

ID: Coptis24_contig00003370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003370
         (1695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269770.1| PREDICTED: uncharacterized protein LOC100251...   418   e-114
emb|CBI30520.3| unnamed protein product [Vitis vinifera]              411   e-112
ref|XP_003632670.1| PREDICTED: uncharacterized protein LOC100251...   411   e-112
ref|XP_002301027.1| predicted protein [Populus trichocarpa] gi|2...   392   e-106
gb|ABK92545.1| unknown [Populus trichocarpa]                          384   e-104

>ref|XP_002269770.1| PREDICTED: uncharacterized protein LOC100251163 isoform 1 [Vitis
            vinifera]
          Length = 434

 Score =  418 bits (1075), Expect = e-114
 Identities = 225/389 (57%), Positives = 289/389 (74%), Gaps = 10/389 (2%)
 Frame = +2

Query: 287  PVAKQMIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGDE-------NTKGVVLLAMSTL 445
            PVA QMI+Y ++ AR  K+ +SYAQGLLVLEQCLS+  +E       N++G+VLLAMSTL
Sbjct: 49   PVALQMIDYALSHARSLKSDESYAQGLLVLEQCLSTHSNEVDDTTSQNSRGMVLLAMSTL 108

Query: 446  LSERGDLNDGMEKLKEIRMLGSSHLGVRVAAVEGLIGLSLEKGQDGVALLIADTCSELLK 625
            LSERG  +D ++KL+ I+ L  SHLGVRVA++EGL+GL+L+  +D  + ++AD C +LL 
Sbjct: 109  LSERGAFDDAIDKLQIIQGLAESHLGVRVASMEGLVGLNLQLERDDTSRVLADKCVQLLG 168

Query: 626  PNSEDVRTLSNEFQGFL--VRANAIRGLVEVLRGKVEIARKCFEEIPDHKYSLGNVMLLR 799
             ++ D+    N F   +  VRA A++GLVE++ G +E A   F+ + D K   GN  L  
Sbjct: 169  NDTADI---GNGFGSKVLNVRAKALKGLVELVHGNLESAESFFQGLQDEKGCTGNAALSY 225

Query: 800  GEFLHATGNFALAKGYYQKAIEASSETDSFSDLDTLAACNLVPMEVRLGVTCALGQLEAH 979
            GEFLH+ G F+LAK  YQKAIE  S    F+D   LAAC++   EV+L  TC LGQLE  
Sbjct: 226  GEFLHSMGKFSLAKELYQKAIEGISANKEFADPYALAACSMSGREVQLAATCDLGQLEGQ 285

Query: 980  SWNFNDAEEILTKALTKAEEDFGSHHPKVGVVLTCIALMYRSKAKLEHSSSLLIQEGLYR 1159
              NF++AEEILT+ LTK EE FGSHHP VG+VLTCIALM+R KA +EHSSSLLIQEGLYR
Sbjct: 286  LGNFSEAEEILTRVLTKTEEHFGSHHPNVGIVLTCIALMFRHKAIMEHSSSLLIQEGLYR 345

Query: 1160 KAIDMLKAPSLETEGAESKVERSDIVALARGAYADILSVQQNRKAEGERMRNWAEKAWRN 1339
            +A+D+LKAPSLETEG+++ V + DIVALARGAYA++L VQQNRK EGERM++WA+ AWRN
Sbjct: 346  RALDLLKAPSLETEGSKADVAQRDIVALARGAYAEVLCVQQNRKDEGERMKSWAQTAWRN 405

Query: 1340 RRLTLTEALEISE-PSKFPVVDTRISRVL 1423
            RRL+L EALE+SE  SK P++D RISR L
Sbjct: 406  RRLSLAEALEMSELCSKVPIIDARISRAL 434


>emb|CBI30520.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  411 bits (1057), Expect = e-112
 Identities = 221/384 (57%), Positives = 285/384 (74%), Gaps = 10/384 (2%)
 Frame = +2

Query: 302  MIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGDE-------NTKGVVLLAMSTLLSERG 460
            MI+Y ++ AR  K+ +SYAQGLLVLEQCLS+  +E       N++G+VLLAMSTLLSERG
Sbjct: 1    MIDYALSHARSLKSDESYAQGLLVLEQCLSTHSNEVDDTTSQNSRGMVLLAMSTLLSERG 60

Query: 461  DLNDGMEKLKEIRMLGSSHLGVRVAAVEGLIGLSLEKGQDGVALLIADTCSELLKPNSED 640
              +D ++KL+ I+ L  SHLGVRVA++EGL+GL+L+  +D  + ++AD C +LL  ++ D
Sbjct: 61   AFDDAIDKLQIIQGLAESHLGVRVASMEGLVGLNLQLERDDTSRVLADKCVQLLGNDTAD 120

Query: 641  VRTLSNEFQGFL--VRANAIRGLVEVLRGKVEIARKCFEEIPDHKYSLGNVMLLRGEFLH 814
            +    N F   +  VRA A++GLVE++ G +E A   F+ + D K   GN  L  GEFLH
Sbjct: 121  I---GNGFGSKVLNVRAKALKGLVELVHGNLESAESFFQGLQDEKGCTGNAALSYGEFLH 177

Query: 815  ATGNFALAKGYYQKAIEASSETDSFSDLDTLAACNLVPMEVRLGVTCALGQLEAHSWNFN 994
            + G F+LAK  YQKAIE  S    F+D   LAAC++   EV+L  TC LGQLE    NF+
Sbjct: 178  SMGKFSLAKELYQKAIEGISANKEFADPYALAACSMSGREVQLAATCDLGQLEGQLGNFS 237

Query: 995  DAEEILTKALTKAEEDFGSHHPKVGVVLTCIALMYRSKAKLEHSSSLLIQEGLYRKAIDM 1174
            +AEEILT+ LTK EE FGSHHP VG+VLTCIALM+R KA +EHSSSLLIQEGLYR+A+D+
Sbjct: 238  EAEEILTRVLTKTEEHFGSHHPNVGIVLTCIALMFRHKAIMEHSSSLLIQEGLYRRALDL 297

Query: 1175 LKAPSLETEGAESKVERSDIVALARGAYADILSVQQNRKAEGERMRNWAEKAWRNRRLTL 1354
            LKAPSLETEG+++ V + DIVALARGAYA++L VQQNRK EGERM++WA+ AWRNRRL+L
Sbjct: 298  LKAPSLETEGSKADVAQRDIVALARGAYAEVLCVQQNRKDEGERMKSWAQTAWRNRRLSL 357

Query: 1355 TEALEISE-PSKFPVVDTRISRVL 1423
             EALE+SE  SK P++D RISR L
Sbjct: 358  AEALEMSELCSKVPIIDARISRAL 381


>ref|XP_003632670.1| PREDICTED: uncharacterized protein LOC100251163 isoform 2 [Vitis
            vinifera]
          Length = 437

 Score =  411 bits (1056), Expect = e-112
 Identities = 225/392 (57%), Positives = 287/392 (73%), Gaps = 13/392 (3%)
 Frame = +2

Query: 287  PVAKQMIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGDE-------NTKGVVLLAMSTL 445
            PVA QMI+Y ++ AR  K+ +SYAQGLLVLEQCLS+  +E       N++G+VLLAMSTL
Sbjct: 49   PVALQMIDYALSHARSLKSDESYAQGLLVLEQCLSTHSNEVDDTTSQNSRGMVLLAMSTL 108

Query: 446  LSERGDLNDGMEKLKEIRMLGSSHLGVRVAAVEGLIGLSLEKGQDGVALLIADTCSELLK 625
            LSERG  +D ++KL+ I+ L  SHLGVRVA++EGL+GL+L+  +D  + ++AD C +LL 
Sbjct: 109  LSERGAFDDAIDKLQIIQGLAESHLGVRVASMEGLVGLNLQLERDDTSRVLADKCVQLLG 168

Query: 626  PNSEDVRTLSNEFQGFL--VRANAIRGLVEVLRGKVEIARKCFEEIPDHKYSLGNVMLLR 799
             ++ D+    N F   +  VRA A++GLVE++ G +E A   F+ + D K   GN  L  
Sbjct: 169  NDTADI---GNGFGSKVLNVRAKALKGLVELVHGNLESAESFFQGLQDEKGCTGNAALSY 225

Query: 800  GEFLHATGNFALAKGYYQKAIEASSETDSFSDLDTLAACNLVPMEVRLGVTCALGQLEAH 979
            GEFLH+ G F+LAK  YQKAIE  S    F+D   LAAC++   EV+L  TC LGQLE  
Sbjct: 226  GEFLHSMGKFSLAKELYQKAIEGISANKEFADPYALAACSMSGREVQLAATCDLGQLEGQ 285

Query: 980  SWNFNDAEEILTKALTKAEEDFGSHHPKVGVVLTCIALMYRSKAKLEHSSSLLIQEGLYR 1159
              NF++AEEILT+ LTK EE FGSHHP VG+VLTCIALM+R KA +EHSSSLLIQEGLYR
Sbjct: 286  LGNFSEAEEILTRVLTKTEEHFGSHHPNVGIVLTCIALMFRHKAIMEHSSSLLIQEGLYR 345

Query: 1160 KAIDMLKAPSLETEGAE---SKVERSDIVALARGAYADILSVQQNRKAEGERMRNWAEKA 1330
            +A+D+LKAPSLETEG     + V + DIVALARGAYA++L VQQNRK EGERM++WA+ A
Sbjct: 346  RALDLLKAPSLETEGMGHDLADVAQRDIVALARGAYAEVLCVQQNRKDEGERMKSWAQTA 405

Query: 1331 WRNRRLTLTEALEISE-PSKFPVVDTRISRVL 1423
            WRNRRL+L EALE+SE  SK P++D RISR L
Sbjct: 406  WRNRRLSLAEALEMSELCSKVPIIDARISRAL 437


>ref|XP_002301027.1| predicted protein [Populus trichocarpa] gi|222842753|gb|EEE80300.1|
            predicted protein [Populus trichocarpa]
          Length = 434

 Score =  392 bits (1006), Expect = e-106
 Identities = 210/388 (54%), Positives = 272/388 (70%), Gaps = 8/388 (2%)
 Frame = +2

Query: 284  DPVAKQMIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGDEN-------TKGVVLLAMST 442
            +PVA QMI+Y ++LA+  K+ +S  Q +LVLEQCLSS   EN       +KG+VLLAMS+
Sbjct: 49   NPVALQMIDYALSLAKSQKSDESQGQAMLVLEQCLSSQSSENQDVVTHNSKGMVLLAMSS 108

Query: 443  LLSERGDLNDGMEKLKEIRMLGSSHLGVRVAAVEGLIGLSLEKGQDGVALLIADTCSELL 622
            LLS RG  ND MEKL+ I+ L +SHL VRVAA+E L+GL+LE G D  + ++AD C ELL
Sbjct: 109  LLSARGSYNDAMEKLQNIQDLINSHLDVRVAAMEALVGLNLEMGNDDTSSVLADKCLELL 168

Query: 623  KPNSEDVRTLSNEFQGFLVRANAIRGLVEVLRGKVEIARKCFEEIPDHKYSLGNVMLLRG 802
                 +++      +    RA AI+GL E+++G +E A   F+   D+K  +GN  L  G
Sbjct: 169  --GKVELKNSDEGSEVASARAKAIKGLAELVQGNLESAEPFFQGFLDNKGCIGNAALSYG 226

Query: 803  EFLHATGNFALAKGYYQKAIEASSETDSFSDLDTLAACNLVPMEVRLGVTCALGQLEAHS 982
            EFLHAT NF+LAK +YQK I+  +    F+D+  LAACN+   EV L  TCALGQLE H 
Sbjct: 227  EFLHATRNFSLAKDFYQKVIQEVANKKDFTDVRALAACNMASEEVLLAATCALGQLEVHM 286

Query: 983  WNFNDAEEILTKALTKAEEDFGSHHPKVGVVLTCIALMYRSKAKLEHSSSLLIQEGLYRK 1162
             NF +AEE LT AL +AE+ FGS HPKVGVVLTC+ALM++ K+K EHSSSLLIQEGLYR+
Sbjct: 287  GNFGNAEETLTSALNRAEQLFGSRHPKVGVVLTCLALMFQHKSKQEHSSSLLIQEGLYRR 346

Query: 1163 AIDMLKAPSLETEGAESKVERSDIVALARGAYADILSVQQNRKAEGERMRNWAEKAWRNR 1342
            AI++LKAP L+ E   +     DI+ALARG YA+ L +Q+NRK EGE+M+ WAE AWRNR
Sbjct: 347  AIELLKAPPLDLEVNRTMRSGMDIIALARGGYAETLCIQENRKGEGEKMKRWAEAAWRNR 406

Query: 1343 RLTLTEALEISEPS-KFPVVDTRISRVL 1423
             L+L+EAL+IS+ S + PVVD RI R L
Sbjct: 407  SLSLSEALKISDSSNRMPVVDARICRAL 434


>gb|ABK92545.1| unknown [Populus trichocarpa]
          Length = 380

 Score =  384 bits (987), Expect = e-104
 Identities = 206/382 (53%), Positives = 267/382 (69%), Gaps = 8/382 (2%)
 Frame = +2

Query: 302  MIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGDEN-------TKGVVLLAMSTLLSERG 460
            MI+Y ++LA+  K+ +S  Q +LVLEQCLSS   EN       +KG+VLLAMS+LLS RG
Sbjct: 1    MIDYALSLAKSQKSDESQGQAMLVLEQCLSSQSSENQDVVTHNSKGMVLLAMSSLLSARG 60

Query: 461  DLNDGMEKLKEIRMLGSSHLGVRVAAVEGLIGLSLEKGQDGVALLIADTCSELLKPNSED 640
              ND MEKL+ I+ L +SHL VRVAA+E L+GL+LE G D  + ++AD C ELL     +
Sbjct: 61   SYNDAMEKLQNIQDLINSHLDVRVAAMEALVGLNLEMGNDDTSSVLADKCLELL--GKVE 118

Query: 641  VRTLSNEFQGFLVRANAIRGLVEVLRGKVEIARKCFEEIPDHKYSLGNVMLLRGEFLHAT 820
            ++      +    RA AI+GL E+++G +E A   F+   D+K  +GN  L  GEFLHAT
Sbjct: 119  LKNSDEGSEVASARAKAIKGLAELVQGNLESAEPFFQGFLDNKGCIGNAALSYGEFLHAT 178

Query: 821  GNFALAKGYYQKAIEASSETDSFSDLDTLAACNLVPMEVRLGVTCALGQLEAHSWNFNDA 1000
             NF+LAK +YQK I+  +    F+D+  LAACN+   EV L  TCALGQLE H  NF +A
Sbjct: 179  RNFSLAKDFYQKVIQEVANKKDFTDVRALAACNMASEEVLLAATCALGQLEVHMGNFGNA 238

Query: 1001 EEILTKALTKAEEDFGSHHPKVGVVLTCIALMYRSKAKLEHSSSLLIQEGLYRKAIDMLK 1180
            EE LT AL +AE+ FGS HPKVGVVLTC+ALM++ K+K EHSSSLLIQEGLYR+AI++LK
Sbjct: 239  EETLTSALNRAEQLFGSRHPKVGVVLTCLALMFQHKSKQEHSSSLLIQEGLYRRAIELLK 298

Query: 1181 APSLETEGAESKVERSDIVALARGAYADILSVQQNRKAEGERMRNWAEKAWRNRRLTLTE 1360
            AP L+ E   +     DI+ALARG YA+ L +Q+NRK EGE+M+ WAE AWRNR L+L+E
Sbjct: 299  APPLDLEVNRTMRSGMDIIALARGGYAETLCIQENRKGEGEKMKRWAEAAWRNRSLSLSE 358

Query: 1361 ALEISEPS-KFPVVDTRISRVL 1423
            AL+IS+ S + PVVD RI R L
Sbjct: 359  ALKISDSSNRMPVVDARICRAL 380


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