BLASTX nr result

ID: Coptis24_contig00003362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003362
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136381.1| PREDICTED: ER lumen protein retaining recept...   162   3e-38
tpg|DAA48757.1| TPA: hypothetical protein ZEAMMB73_112733 [Zea m...   157   7e-37
gb|AFW65655.1| hypothetical protein ZEAMMB73_337013 [Zea mays]        157   7e-37
ref|NP_001148789.1| ER lumen protein retaining receptor C28H8.4 ...   157   7e-37
ref|XP_002529256.1| ER lumen protein retaining receptor, putativ...   157   9e-37

>ref|XP_004136381.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis
           sativus] gi|449505760|ref|XP_004162562.1| PREDICTED: ER
           lumen protein retaining receptor-like [Cucumis sativus]
          Length = 272

 Score =  162 bits (409), Expect = 3e-38
 Identities = 86/119 (72%), Positives = 92/119 (77%)
 Frame = +3

Query: 135 ASRRPVYAVATWVKRQPXXXXXXXXXXXXXXXXXXXXXXPKVKAFLAVVSGMAALAFLRF 314
           A++RP+ AVATWV+RQP                      PK+KAFLAVVSGMAAL FLRF
Sbjct: 3   ATKRPIQAVATWVRRQP----------------------PKIKAFLAVVSGMAALVFLRF 40

Query: 315 IVHDHDNLFVAAEAVHAIGICVLIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSFVME 491
           +VHDHDNLFVAAEAVHAIGI VLIYKL KERTCAGLSLKSQ LTAIFLAVRLYCSFVME
Sbjct: 41  VVHDHDNLFVAAEAVHAIGISVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVME 99


>tpg|DAA48757.1| TPA: hypothetical protein ZEAMMB73_112733 [Zea mays]
          Length = 273

 Score =  157 bits (398), Expect = 7e-37
 Identities = 86/123 (69%), Positives = 92/123 (74%)
 Frame = +3

Query: 123 MRGSASRRPVYAVATWVKRQPXXXXXXXXXXXXXXXXXXXXXXPKVKAFLAVVSGMAALA 302
           MRGS SRRPV  V  WV+RQP                      PKVKAFLAVV+GMAAL 
Sbjct: 1   MRGS-SRRPVAVVMAWVRRQP----------------------PKVKAFLAVVAGMAALV 37

Query: 303 FLRFIVHDHDNLFVAAEAVHAIGICVLIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSF 482
           F+RFIVHDHDNLFVAAEA HA+GI VLIYKLTKE+TCAGLSLKSQ LTA+FLAVRLYCSF
Sbjct: 38  FIRFIVHDHDNLFVAAEAAHALGIAVLIYKLTKEKTCAGLSLKSQDLTALFLAVRLYCSF 97

Query: 483 VME 491
           VME
Sbjct: 98  VME 100


>gb|AFW65655.1| hypothetical protein ZEAMMB73_337013 [Zea mays]
          Length = 224

 Score =  157 bits (398), Expect = 7e-37
 Identities = 86/123 (69%), Positives = 92/123 (74%)
 Frame = +3

Query: 123 MRGSASRRPVYAVATWVKRQPXXXXXXXXXXXXXXXXXXXXXXPKVKAFLAVVSGMAALA 302
           MRGS SRRPV  V  WV+RQP                      PKVKAFLAVV+GMAAL 
Sbjct: 1   MRGS-SRRPVAVVMAWVRRQP----------------------PKVKAFLAVVAGMAALV 37

Query: 303 FLRFIVHDHDNLFVAAEAVHAIGICVLIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSF 482
           F+RFIVHDHDNLFVAAEA HA+GI VLIYKLTKE+TCAGLSLKSQ LTA+FLAVRLYCSF
Sbjct: 38  FIRFIVHDHDNLFVAAEAAHALGIAVLIYKLTKEKTCAGLSLKSQDLTALFLAVRLYCSF 97

Query: 483 VME 491
           VME
Sbjct: 98  VME 100


>ref|NP_001148789.1| ER lumen protein retaining receptor C28H8.4 [Zea mays]
           gi|195622166|gb|ACG32913.1| ER lumen protein retaining
           receptor C28H8.4 [Zea mays] gi|224030517|gb|ACN34334.1|
           unknown [Zea mays] gi|413925724|gb|AFW65656.1| ER lumen
           protein retaining receptor C28H8.4 [Zea mays]
          Length = 273

 Score =  157 bits (398), Expect = 7e-37
 Identities = 86/123 (69%), Positives = 92/123 (74%)
 Frame = +3

Query: 123 MRGSASRRPVYAVATWVKRQPXXXXXXXXXXXXXXXXXXXXXXPKVKAFLAVVSGMAALA 302
           MRGS SRRPV  V  WV+RQP                      PKVKAFLAVV+GMAAL 
Sbjct: 1   MRGS-SRRPVAVVMAWVRRQP----------------------PKVKAFLAVVAGMAALV 37

Query: 303 FLRFIVHDHDNLFVAAEAVHAIGICVLIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSF 482
           F+RFIVHDHDNLFVAAEA HA+GI VLIYKLTKE+TCAGLSLKSQ LTA+FLAVRLYCSF
Sbjct: 38  FIRFIVHDHDNLFVAAEAAHALGIAVLIYKLTKEKTCAGLSLKSQDLTALFLAVRLYCSF 97

Query: 483 VME 491
           VME
Sbjct: 98  VME 100


>ref|XP_002529256.1| ER lumen protein retaining receptor, putative [Ricinus communis]
           gi|223531292|gb|EEF33134.1| ER lumen protein retaining
           receptor, putative [Ricinus communis]
          Length = 272

 Score =  157 bits (397), Expect = 9e-37
 Identities = 83/119 (69%), Positives = 92/119 (77%)
 Frame = +3

Query: 135 ASRRPVYAVATWVKRQPXXXXXXXXXXXXXXXXXXXXXXPKVKAFLAVVSGMAALAFLRF 314
           A +RP++AV+TWV+RQP                      PKVKAFLAVV+GMAAL FLRF
Sbjct: 3   APKRPIHAVSTWVRRQP----------------------PKVKAFLAVVAGMAALVFLRF 40

Query: 315 IVHDHDNLFVAAEAVHAIGICVLIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSFVME 491
           IVHDHDNLFVAAEAVH+IGI VLIYKL KE+TCAGLSLKSQ LTA+FLAVRLYCSFVME
Sbjct: 41  IVHDHDNLFVAAEAVHSIGIIVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVME 99