BLASTX nr result
ID: Coptis24_contig00003352
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003352
(2208 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266267.1| PREDICTED: DELLA protein GAI1-like isoform 1... 675 0.0
emb|CAN59753.1| hypothetical protein VITISV_036639 [Vitis vinifera] 668 0.0
ref|XP_002312450.1| DELLA domain GRAS family transcription facto... 659 0.0
gb|AEX97111.1| spur-type DELLA protein [Malus x domestica] 655 0.0
gb|AAY56750.1| DELLA protein [Malus x domestica] 655 0.0
>ref|XP_002266267.1| PREDICTED: DELLA protein GAI1-like isoform 1 [Vitis vinifera]
Length = 613
Score = 675 bits (1741), Expect = 0.0
Identities = 362/589 (61%), Positives = 434/589 (73%), Gaps = 39/589 (6%)
Frame = +3
Query: 288 GGAGTPQGGFSMEKASINNKMCWQEEDAGDDELLAVLGYNVRSSDMADVASKIEQLEMMM 467
GG G + G SM A Q++DAG DELLAVLGYNVRSSDM DVA K+EQLEM+M
Sbjct: 16 GGGGKGEEGSSMVSAKGKMWDDGQQQDAGMDELLAVLGYNVRSSDMVDVAQKLEQLEMVM 75
Query: 468 GSSSAAQEDVLLSHLGGSDTVHYNPSDLSTWLESMICEAE---LSLPXXXXXXXXHNPYI 638
G+ AQED + SHL S TVHYNPSDLS W++SM+ E + +P +
Sbjct: 76 GN---AQEDGI-SHLS-SGTVHYNPSDLSGWVQSMLTELNPPSSAFASSSQQTPIDDPLL 130
Query: 639 PPAESSTTI-------------KAQIFDEPVSSNYDLSAIPGEVIY--------GEREKK 755
P+ESST +++I+++ +S+YDLSAIPG +Y GE+ K
Sbjct: 131 APSESSTITTLDFSGSRQQSEHQSRIYND--NSDYDLSAIPGVAVYRRPDQQGDGEKSSK 188
Query: 756 RIKQEIPSISST-------------ESTRPVVLIDSQENGIRLVHTLMAAAEAVQQDNLK 896
R+K S SS+ ESTRPVV++DSQE G+RLVHTLMA A+AVQQDN+K
Sbjct: 189 RMKTASSSSSSSTQQVQENGLASVAESTRPVVVVDSQETGVRLVHTLMACADAVQQDNMK 248
Query: 897 LAESLVKQISLLAVSQAGAMRKVATYFAEALARRIYGFYPQPSLDSSFSDILQIHFYETC 1076
LA++LVK I LLA SQAGAMRKVATYFAEALARRIY YPQ SL+SS+SDILQ+HFYE C
Sbjct: 249 LADALVKHIGLLAASQAGAMRKVATYFAEALARRIYRIYPQDSLESSYSDILQMHFYEAC 308
Query: 1077 PHLKFAHFTANQAILDSFADSNRVHIIDFSMKQGIQWPALMQALAKRPNGPPSFRLTGIG 1256
P+LKFAHFTANQAIL++FA +NRVH+IDF +KQG+QWPALMQALA RP GPPSFRLTGIG
Sbjct: 309 PYLKFAHFTANQAILEAFAGANRVHVIDFGLKQGMQWPALMQALALRPGGPPSFRLTGIG 368
Query: 1257 PPQPDNTDALQQVGWKLAQVAENLHVEFEYRGFVCNXXXXXXXXXXXXRPG--ETVAVNS 1430
PPQPDNTDALQQVGWKLAQ+AE + VEFE+RGFV N RP E VAVNS
Sbjct: 369 PPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVANSLADLEPSMLQIRPPEVEAVAVNS 428
Query: 1431 MFELHQLLAQPNAIDKVLGTIKEMKPKIVTIVEEEANHNGPIFFDRFTEALHYYSTLFDS 1610
+ ELH+LLA+P AI+KVL +IK MKPKIVT+VE+EA+HNGP+F DRFTEALHYYS LFDS
Sbjct: 429 VLELHRLLARPGAIEKVLSSIKAMKPKIVTVVEQEASHNGPVFLDRFTEALHYYSNLFDS 488
Query: 1611 LEGYANALLPINGQDLVMSEMYFGRQICNLVACEGVDRVERHESLSQWKNRMESAGFGLS 1790
LEG + P + QDL+MSE+Y GRQICN+VACEG +RVERHE+LSQW++RM SAGF
Sbjct: 489 LEGC--GVSPPSSQDLMMSEIYLGRQICNVVACEGAERVERHETLSQWRSRMGSAGFDPV 546
Query: 1791 HLGSNTYRQVSSLLSMFXXXXXYIVDENNGCLLLAWHTRPLVASSAWQL 1937
HLGSN ++Q S LL++F Y V+ENNGCL+L WHTRPL+A+SAWQL
Sbjct: 547 HLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQL 595
>emb|CAN59753.1| hypothetical protein VITISV_036639 [Vitis vinifera]
Length = 580
Score = 668 bits (1723), Expect = 0.0
Identities = 354/566 (62%), Positives = 425/566 (75%), Gaps = 39/566 (6%)
Frame = +3
Query: 357 QEEDAGDDELLAVLGYNVRSSDMADVASKIEQLEMMMGSSSAAQEDVLLSHLGGSDTVHY 536
Q++DAG DELLAVLGYNVRSSDM DVA K+EQLEM+MG+ AQED + SHL S TVHY
Sbjct: 6 QQQDAGMDELLAVLGYNVRSSDMVDVAQKLEQLEMVMGN---AQEDGI-SHLS-SGTVHY 60
Query: 537 NPSDLSTWLESMICEAE---LSLPXXXXXXXXHNPYIPPAESSTTI-------------K 668
NPSDLS W++SM+ E + +P + P+ESST +
Sbjct: 61 NPSDLSGWVQSMLTELNPPSSAFASSSQQTPIDDPLLAPSESSTITTLDFSGSRQQSEHQ 120
Query: 669 AQIFDEPVSSNYDLSAIPGEVIY--------GEREKKRIKQEIPSISST----------- 791
++I+++ +S+YDLSAIPG +Y GE+ KR+K S SS+
Sbjct: 121 SRIYND--NSDYDLSAIPGVAVYRRPDQQGDGEKSSKRMKTASSSSSSSTQQVQENGLAS 178
Query: 792 --ESTRPVVLIDSQENGIRLVHTLMAAAEAVQQDNLKLAESLVKQISLLAVSQAGAMRKV 965
ESTRPVV++DSQE G+RLVHTLMA A+AVQQDN+KLA++LVK I LLA SQAGAMRKV
Sbjct: 179 VAESTRPVVVVDSQETGVRLVHTLMACADAVQQDNMKLADALVKHIGLLAASQAGAMRKV 238
Query: 966 ATYFAEALARRIYGFYPQPSLDSSFSDILQIHFYETCPHLKFAHFTANQAILDSFADSNR 1145
ATYFAEALARRIY YPQ SL+SS+SDILQ+HFYE CP+LKFAHFTANQAIL++FA +NR
Sbjct: 239 ATYFAEALARRIYRIYPQDSLESSYSDILQMHFYEACPYLKFAHFTANQAILEAFAGANR 298
Query: 1146 VHIIDFSMKQGIQWPALMQALAKRPNGPPSFRLTGIGPPQPDNTDALQQVGWKLAQVAEN 1325
VH+IDF +KQG+QWPALMQALA RP GPP FRLTGIGPPQPDNTDALQQVGWKLAQ+AE
Sbjct: 299 VHVIDFGLKQGMQWPALMQALALRPGGPPXFRLTGIGPPQPDNTDALQQVGWKLAQLAET 358
Query: 1326 LHVEFEYRGFVCNXXXXXXXXXXXXRPG--ETVAVNSMFELHQLLAQPNAIDKVLGTIKE 1499
+ VEFE+RGFV N RP E VAVNS+ ELH+LLA+P AI+KVL +IK
Sbjct: 359 IGVEFEFRGFVANSLADLEPSMLQIRPPEVEAVAVNSVLELHRLLARPGAIEKVLSSIKA 418
Query: 1500 MKPKIVTIVEEEANHNGPIFFDRFTEALHYYSTLFDSLEGYANALLPINGQDLVMSEMYF 1679
MKPKIVT+VE+EA+HNGP+F DRFTEALHYYS LFDSLEG + P + QDL+MSE+Y
Sbjct: 419 MKPKIVTVVEQEASHNGPVFLDRFTEALHYYSNLFDSLEGC--GVSPPSSQDLMMSEIYL 476
Query: 1680 GRQICNLVACEGVDRVERHESLSQWKNRMESAGFGLSHLGSNTYRQVSSLLSMFXXXXXY 1859
GRQICN+VACEG +RVERHE+LSQW++RM SAGF HLGSN ++Q S LL++F Y
Sbjct: 477 GRQICNVVACEGAERVERHETLSQWRSRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGY 536
Query: 1860 IVDENNGCLLLAWHTRPLVASSAWQL 1937
V+ENNGCL+L WHTRPL+A+SAWQL
Sbjct: 537 RVEENNGCLMLGWHTRPLIATSAWQL 562
>ref|XP_002312450.1| DELLA domain GRAS family transcription factor, GA insensitive (GAI),
GA1-3 1 (RGA1) repressor protein [Populus trichocarpa]
gi|222852270|gb|EEE89817.1| DELLA domain GRAS family
transcription factor, GA insensitive (GAI), GA1-3 1
(RGA1) repressor protein [Populus trichocarpa]
Length = 600
Score = 659 bits (1700), Expect = 0.0
Identities = 356/594 (59%), Positives = 423/594 (71%), Gaps = 33/594 (5%)
Frame = +3
Query: 255 PATMKRT-YQDNGGAGTPQGGFSMEKASINNKMCWQEEDAGDDELLAVLGYNVRSSDMAD 431
P+T+ Y + A P G KA I + + D G DELLAVLGY VRSSDMA+
Sbjct: 16 PSTLAAAGYSTSTSAMAPHNG----KAKIWEEGEGHQADGGMDELLAVLGYKVRSSDMAE 71
Query: 432 VASKIEQLEMMMGSSSAAQEDVLLSHLGGSDTVHYNPSDLSTWLESMICEAELSLPXXXX 611
VA K+EQLE +MG AQED L SHL SD+VHYNPSDLSTWLESMI E +L
Sbjct: 72 VAQKLEQLEEVMGH---AQEDGL-SHLA-SDSVHYNPSDLSTWLESMISELNPNLNFDPS 126
Query: 612 XXXXHNPYIPPAESSTTI-----------KAQIFDEPVSSNYDLSAIPGEVIYGE----- 743
+ + PAESST + ++F+E SS+YDL IPG+ ++ +
Sbjct: 127 A----DSLLAPAESSTITSIDFSDHKHHQQQKLFEESSSSDYDLKVIPGKAVFSQTQIDS 182
Query: 744 REKKRIKQEIPSISS----------------TESTRPVVLIDSQENGIRLVHTLMAAAEA 875
RE KR+K ++ SS TESTRPVVL+DSQENGIRLVH LMA AEA
Sbjct: 183 RESKRLKTDLYQTSSSSSLSSATTLGSFGISTESTRPVVLVDSQENGIRLVHLLMACAEA 242
Query: 876 VQQDNLKLAESLVKQISLLAVSQAGAMRKVATYFAEALARRIYGFYPQPSLDSSFSDILQ 1055
VQ+ N LAE+LVKQI LAVSQAG MRKVATYFAEALARRIY PQ S D S SDILQ
Sbjct: 243 VQESNFTLAEALVKQIGFLAVSQAGVMRKVATYFAEALARRIYKLCPQNSTDHSLSDILQ 302
Query: 1056 IHFYETCPHLKFAHFTANQAILDSFADSNRVHIIDFSMKQGIQWPALMQALAKRPNGPPS 1235
IHFYETCP+LKFAHFTANQAIL++F RVH+IDFSM QG+QWPALMQALA RP GPP+
Sbjct: 303 IHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALMQALALRPGGPPA 362
Query: 1236 FRLTGIGPPQPDNTDALQQVGWKLAQVAENLHVEFEYRGFVCNXXXXXXXXXXXXRPGET 1415
FRLTGIGPP DNTD LQ+VGWKLAQ+AE +HVEFEYRGFV N RP E+
Sbjct: 363 FRLTGIGPPAHDNTDHLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRPTES 422
Query: 1416 VAVNSMFELHQLLAQPNAIDKVLGTIKEMKPKIVTIVEEEANHNGPIFFDRFTEALHYYS 1595
VAVNS+FELH+LL++P AI+KVL +K+MKP+IVT+VE+EANHNGPIF DRFTE+LHYYS
Sbjct: 423 VAVNSVFELHKLLSRPGAIEKVLSVVKQMKPEIVTVVEQEANHNGPIFLDRFTESLHYYS 482
Query: 1596 TLFDSLEGYANALLPINGQDLVMSEMYFGRQICNLVACEGVDRVERHESLSQWKNRMESA 1775
TLFDSLEG ++ QD +MSE+Y G+QICN+VACEG DRVERHE+L+QW+ R+ S
Sbjct: 483 TLFDSLEG------SVSTQDKIMSEVYLGKQICNVVACEGPDRVERHETLTQWRTRLGSV 536
Query: 1776 GFGLSHLGSNTYRQVSSLLSMFXXXXXYIVDENNGCLLLAWHTRPLVASSAWQL 1937
GF HLGSN ++Q S LL++F Y V+ENNGCL+L WHTRPL+A+SAW+L
Sbjct: 537 GFAPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWRL 590
>gb|AEX97111.1| spur-type DELLA protein [Malus x domestica]
Length = 584
Score = 655 bits (1690), Expect = 0.0
Identities = 361/596 (60%), Positives = 429/596 (71%), Gaps = 38/596 (6%)
Frame = +3
Query: 264 MKRTYQDNGGAGTPQGGFSMEKAS------INNKMCWQEED------AGD-DELLAVLGY 404
MKR ++D+ T + S + S +N K E+D GD DELLAVLGY
Sbjct: 1 MKRDHRDSRATVTARQNNSKPEYSSPPSSALNGKAKIWEDDQDGYSAGGDMDELLAVLGY 60
Query: 405 NVRSSDMADVASKIEQLEMMMGSSSAAQEDVLLSHLGGSDTVHYNPSDLSTWLESMICEA 584
VRS DMADVA K+EQLEM+MGS AQED + S L SDTVHYNPSDLS W++SM+ E
Sbjct: 61 KVRSDDMADVAEKLEQLEMVMGS---AQEDGI-SQL--SDTVHYNPSDLSGWVQSMLSE- 113
Query: 585 ELSLPXXXXXXXXHNPYIPPAESSTTI--------KAQIFDEPVSSNYDLSAIPGEVIY- 737
L +P + PAESS+ ++++F + S YDL AIPG Y
Sbjct: 114 ---LNTGDDMPSIDDPLLAPAESSSITSMSFSNSQRSRVFSD--DSEYDLRAIPGVAAYP 168
Query: 738 -------GEREKKRIKQEIPSISSTES-------TRPVVLIDSQENGIRLVHTLMAAAEA 875
E +KR+K I S S+ S TRP VL+DSQE G+RLVHTLMA AEA
Sbjct: 169 PAYSPSDSESTRKRLKTSIGSDSNGSSSGAVSDPTRPRVLVDSQETGVRLVHTLMACAEA 228
Query: 876 VQQDNLKLAESLVKQISLLAVSQAGAMRKVATYFAEALARRIYGFYPQPSLDSSFSDILQ 1055
VQQ+NLKLA++LVK + LLA SQ GAMRKVATYFAEALARRIY YPQ LDSS+SDIL+
Sbjct: 229 VQQENLKLADALVKHVGLLAASQTGAMRKVATYFAEALARRIYRIYPQDCLDSSYSDILE 288
Query: 1056 IHFYETCPHLKFAHFTANQAILDSFADSNRVHIIDFSMKQGIQWPALMQALAKRPNGPPS 1235
+HFYETCP+LKFAHFTANQAIL++FA ++RVH+IDF +KQG+QWPALMQALA RP GPP+
Sbjct: 289 MHFYETCPYLKFAHFTANQAILEAFATASRVHVIDFGLKQGMQWPALMQALALRPGGPPA 348
Query: 1236 FRLTGIGPPQPDNTDALQQVGWKLAQVAENLHVEFEYRGFVCNXXXXXXXXXXXXRP--G 1409
FRLTGIGPPQPDNTDALQQVGWKLAQ+AE + VEFE+RGFV + RP G
Sbjct: 349 FRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVASSLADLTPSMLDIRPSEG 408
Query: 1410 ETVAVNSMFELHQLLAQPNAIDKVLGTIKEMKPKIVTIVEEEANHNGPIFFDRFTEALHY 1589
E VAVNS+FELH+LLA+P A+DKVL +IK MKPKIVTIVE+EANHNGP+F DRFTEALHY
Sbjct: 409 EVVAVNSVFELHRLLARPGAVDKVLSSIKAMKPKIVTIVEQEANHNGPVFLDRFTEALHY 468
Query: 1590 YSTLFDSLEGYANALLPINGQDLVMSEMYFGRQICNLVACEGVDRVERHESLSQWKNRME 1769
YS LFDSLEG + QDLVMSE+Y GRQICN++ACEG DRVERHE+LSQW+ RM+
Sbjct: 469 YSNLFDSLEGSSGP-----SQDLVMSEVYLGRQICNVMACEGGDRVERHETLSQWRGRMD 523
Query: 1770 SAGFGLSHLGSNTYRQVSSLLSMFXXXXXYIVDENNGCLLLAWHTRPLVASSAWQL 1937
SAGF HLGSN ++Q S LL++F Y V+ENNG L+L WHTRPL+A+SAWQL
Sbjct: 524 SAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGSLMLGWHTRPLIATSAWQL 579
>gb|AAY56750.1| DELLA protein [Malus x domestica]
Length = 584
Score = 655 bits (1690), Expect = 0.0
Identities = 361/596 (60%), Positives = 429/596 (71%), Gaps = 38/596 (6%)
Frame = +3
Query: 264 MKRTYQDNGGAGTPQGGFSMEKAS------INNKMCWQEED------AGD-DELLAVLGY 404
MKR ++D+ T + S + S +N K E+D GD DELLAVLGY
Sbjct: 1 MKRDHRDSRATVTARENNSKPEYSSPPSSALNGKAKIWEDDQDGYSAGGDMDELLAVLGY 60
Query: 405 NVRSSDMADVASKIEQLEMMMGSSSAAQEDVLLSHLGGSDTVHYNPSDLSTWLESMICEA 584
VRS DMADVA K+EQLEM+MGS AQED + S L SDTVHYNPSDLS W++SM+ E
Sbjct: 61 KVRSDDMADVAEKLEQLEMVMGS---AQEDGI-SQL--SDTVHYNPSDLSGWVQSMLSE- 113
Query: 585 ELSLPXXXXXXXXHNPYIPPAESSTTI--------KAQIFDEPVSSNYDLSAIPGEVIY- 737
L +P + PAESS+ ++++F + S YDL AIPG Y
Sbjct: 114 ---LNTGDDMPSIDDPLLAPAESSSITSMSFSNSQRSRVFSD--DSEYDLRAIPGVAAYP 168
Query: 738 -------GEREKKRIKQEIPSISSTES-------TRPVVLIDSQENGIRLVHTLMAAAEA 875
E +KR+K I S S+ S TRP VL+DSQE G+RLVHTLMA AEA
Sbjct: 169 PAYSPSDSESTRKRLKTSIGSDSNGSSSGAVSDPTRPRVLVDSQETGVRLVHTLMACAEA 228
Query: 876 VQQDNLKLAESLVKQISLLAVSQAGAMRKVATYFAEALARRIYGFYPQPSLDSSFSDILQ 1055
VQQ+NLKLA++LVK + LLA SQ GAMRKVATYFAEALARRIY YPQ LDSS+SDIL+
Sbjct: 229 VQQENLKLADALVKHVGLLAASQTGAMRKVATYFAEALARRIYRIYPQDCLDSSYSDILE 288
Query: 1056 IHFYETCPHLKFAHFTANQAILDSFADSNRVHIIDFSMKQGIQWPALMQALAKRPNGPPS 1235
+HFYETCP+LKFAHFTANQAIL++FA ++RVH+IDF +KQG+QWPALMQALA RP GPP+
Sbjct: 289 MHFYETCPYLKFAHFTANQAILEAFATASRVHVIDFGLKQGMQWPALMQALALRPGGPPA 348
Query: 1236 FRLTGIGPPQPDNTDALQQVGWKLAQVAENLHVEFEYRGFVCNXXXXXXXXXXXXRP--G 1409
FRLTGIGPPQPDNTDALQQVGWKLAQ+AE + VEFE+RGFV + RP G
Sbjct: 349 FRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVASSLADLTPSMLDIRPSEG 408
Query: 1410 ETVAVNSMFELHQLLAQPNAIDKVLGTIKEMKPKIVTIVEEEANHNGPIFFDRFTEALHY 1589
E VAVNS+FELH+LLA+P A+DKVL +IK MKPKIVTIVE+EANHNGP+F DRFTEALHY
Sbjct: 409 EVVAVNSVFELHRLLARPGAVDKVLSSIKAMKPKIVTIVEQEANHNGPVFLDRFTEALHY 468
Query: 1590 YSTLFDSLEGYANALLPINGQDLVMSEMYFGRQICNLVACEGVDRVERHESLSQWKNRME 1769
YS LFDSLEG + QDLVMSE+Y GRQICN++ACEG DRVERHE+LSQW+ RM+
Sbjct: 469 YSNLFDSLEGSSGP-----SQDLVMSEVYLGRQICNVMACEGGDRVERHETLSQWRGRMD 523
Query: 1770 SAGFGLSHLGSNTYRQVSSLLSMFXXXXXYIVDENNGCLLLAWHTRPLVASSAWQL 1937
SAGF HLGSN ++Q S LL++F Y V+ENNG L+L WHTRPL+A+SAWQL
Sbjct: 524 SAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGSLMLGWHTRPLIATSAWQL 579