BLASTX nr result

ID: Coptis24_contig00003345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003345
         (1383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514124.1| nucleosome assembly protein, putative [Ricin...   156   1e-35
ref|XP_002960172.1| hypothetical protein SELMODRAFT_74970 [Selag...   155   2e-35
emb|CAD27460.1| nucleosome assembly protein 1-like protein 1 [Ni...   155   3e-35
emb|CAD27459.1| nucleosome assembly protein 1-like protein 2 [Or...   154   5e-35
ref|XP_003533761.1| PREDICTED: nucleosome assembly protein 1-lik...   154   5e-35

>ref|XP_002514124.1| nucleosome assembly protein, putative [Ricinus communis]
            gi|223546580|gb|EEF48078.1| nucleosome assembly protein,
            putative [Ricinus communis]
          Length = 372

 Score =  156 bits (395), Expect = 1e-35
 Identities = 85/191 (44%), Positives = 121/191 (63%), Gaps = 6/191 (3%)
 Frame = -3

Query: 1303 VKKRIYALKLLQKQHDMVR----KARAAGIFKAGDESLVQDLYGKRFEIVNGIMDVDTIN 1136
            V+KR+  L+ +Q QHD +     + RAA   +A  + L Q LY KR++IVNG ++VD   
Sbjct: 49   VRKRVEVLREVQSQHDELEAKFFEERAA--LEAKYQKLYQPLYAKRYDIVNGAVEVDGAT 106

Query: 1135 NETLKEIPQYCPEDEAVKGIPDFWLNVLRYYDWI--EVTEADEKVLAFLQDIRICHLSNP 962
             E   E  Q   E +  KG+PDFWL  ++  + +  E+TE DE  L +L+DI+ C + +P
Sbjct: 107  KEAAME--QEGAEADEEKGVPDFWLTAMKNNEVLAEEITERDEGALKYLKDIKWCRIDDP 164

Query: 961  NRIRLEFLFECNPYFKNTVLTKTYHVQTDGKKSYMRKAIGTEIEWYFGQSPKKLLVRNKP 782
               +LEF F+ NPYFKNTVLTKTYH+  D  +  + KAIGTEIEWY G+   + L++ KP
Sbjct: 165  KGFKLEFFFDTNPYFKNTVLTKTYHM-IDEDEPILEKAIGTEIEWYPGKCLTQKLLKKKP 223

Query: 781  KKGSQKTKPVI 749
            KKGS+  KP++
Sbjct: 224  KKGSKSAKPIV 234


>ref|XP_002960172.1| hypothetical protein SELMODRAFT_74970 [Selaginella moellendorffii]
            gi|300171111|gb|EFJ37711.1| hypothetical protein
            SELMODRAFT_74970 [Selaginella moellendorffii]
          Length = 335

 Score =  155 bits (392), Expect = 2e-35
 Identities = 89/203 (43%), Positives = 128/203 (63%), Gaps = 6/203 (2%)
 Frame = -3

Query: 1342 QSEYYMILTAPKQVKKRIYALKLLQKQHDMV----RKARAAGIFKAGDESLVQDLYGKRF 1175
            QS  Y+   +PK VKKR+ AL+ LQKQHD V    R+ RA  I +A  + L    Y KRF
Sbjct: 25   QSSGYVESLSPK-VKKRVQALQDLQKQHDEVEMKFREERA--ILEAKYQKLYAPFYAKRF 81

Query: 1174 EIVNGIMDVDTINNETLKEIPQYCPEDEAVKGIPDFWLNVLRYYDWI--EVTEADEKVLA 1001
            EIV G +DVD    E   E      + E   G+P+FWL  ++  + +  ++TE DE  L 
Sbjct: 82   EIVTGAVDVDDNKGEAEAEA-----KTEEENGVPEFWLTAMKSNEVLGMQITERDEGALK 136

Query: 1000 FLQDIRICHLSNPNRIRLEFLFECNPYFKNTVLTKTYHVQTDGKKSYMRKAIGTEIEWYF 821
            FL++I+ C+L NP   RL+F F+ NPYF+N+VL+KTYH+  D  +  + +AIGTEIEW+ 
Sbjct: 137  FLKEIKWCNLENPKGFRLDFYFDTNPYFRNSVLSKTYHM-VDEDEPILERAIGTEIEWHA 195

Query: 820  GQSPKKLLVRNKPKKGSQKTKPV 752
            G++  + +++ KPKKG++ TKPV
Sbjct: 196  GKNLTQKILKKKPKKGAKNTKPV 218


>emb|CAD27460.1| nucleosome assembly protein 1-like protein 1 [Nicotiana tabacum]
          Length = 374

 Score =  155 bits (391), Expect = 3e-35
 Identities = 83/188 (44%), Positives = 117/188 (62%), Gaps = 4/188 (2%)
 Frame = -3

Query: 1303 VKKRIYALKLLQKQHDMVRKA--RAAGIFKAGDESLVQDLYGKRFEIVNGIMDVDTINNE 1130
            V+KR+  LK +Q QHD +         + +A  + L Q LY KRF+IVNG+++V+T   E
Sbjct: 51   VRKRVEVLKEIQSQHDELEAKFYEERAVLEAKYQKLYQPLYTKRFDIVNGVVEVNTSETE 110

Query: 1129 TLKEIPQYCPEDEAVKGIPDFWLNVLRYYDWI--EVTEADEKVLAFLQDIRICHLSNPNR 956
                + Q   ED   KG+PDFWL  ++  D +  E+TE DE  L FL+DI+   + NP  
Sbjct: 111  AAA-MDQDEDEDAVGKGVPDFWLIAMKNNDVLSEEITERDEGALKFLKDIKWAKIDNPKG 169

Query: 955  IRLEFLFECNPYFKNTVLTKTYHVQTDGKKSYMRKAIGTEIEWYFGQSPKKLLVRNKPKK 776
             +LEF F+ NPYF NTVLTKTYH+  D  +  + KA+GTEIEWY G+   + +++ KPKK
Sbjct: 170  FKLEFFFDTNPYFTNTVLTKTYHM-IDEDEPILEKALGTEIEWYPGKCLTQKILKKKPKK 228

Query: 775  GSQKTKPV 752
            GS+  KP+
Sbjct: 229  GSKNAKPI 236


>emb|CAD27459.1| nucleosome assembly protein 1-like protein 2 [Oryza sativa]
            gi|218197182|gb|EEC79609.1| hypothetical protein
            OsI_20803 [Oryza sativa Indica Group]
          Length = 364

 Score =  154 bits (389), Expect = 5e-35
 Identities = 80/191 (41%), Positives = 125/191 (65%), Gaps = 6/191 (3%)
 Frame = -3

Query: 1306 QVKKRIYALKLLQKQHDMVR----KARAAGIFKAGDESLVQDLYGKRFEIVNGIMDVDTI 1139
            +V+KR+  L+ +Q QHD +     + RAA   +A  + + + LY KR+EIVNG+++VD +
Sbjct: 56   KVRKRVEVLREIQSQHDDLEAKFFEERAA--LEAKYQKMYEPLYSKRYEIVNGVVEVDGV 113

Query: 1138 NNETLKEIPQYCPEDEAVKGIPDFWLNVLRYYDWI--EVTEADEKVLAFLQDIRICHLSN 965
              E   E P    E +  KG+P+FWLN ++ ++ +  E+ E DE+ L +L+DI+   +S 
Sbjct: 114  TKEAADETPA---EQKEEKGVPEFWLNAMKNHEILSEEIQERDEEALKYLKDIKWYRISE 170

Query: 964  PNRIRLEFLFECNPYFKNTVLTKTYHVQTDGKKSYMRKAIGTEIEWYFGQSPKKLLVRNK 785
            P   +LEF F+ NP+FKN+VLTKTYH+  D  +  + KAIGTEIEW+ G+   + +++ K
Sbjct: 171  PKGFKLEFYFDTNPFFKNSVLTKTYHM-IDEDEPILEKAIGTEIEWFPGKCLTQKVLKKK 229

Query: 784  PKKGSQKTKPV 752
            PKKGS+ TKP+
Sbjct: 230  PKKGSKNTKPI 240


>ref|XP_003533761.1| PREDICTED: nucleosome assembly protein 1-like 1-like isoform 2
            [Glycine max]
          Length = 364

 Score =  154 bits (389), Expect = 5e-35
 Identities = 81/193 (41%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
 Frame = -3

Query: 1318 TAPKQVKKRIYALKLLQKQHDMVRK--ARAAGIFKAGDESLVQDLYGKRFEIVNGIMDVD 1145
            T    V+KR+ +L+ +Q +HD +     +     +A  + L Q LY KR+EIVNG+++V+
Sbjct: 46   TLSPNVRKRVESLREIQGKHDEIEADFLKEKEALEAKYQKLYQPLYTKRYEIVNGVIEVE 105

Query: 1144 TINNETLKEIPQYCPEDEAVKGIPDFWLNVLRYYDWI--EVTEADEKVLAFLQDIRICHL 971
               NET  E      E++  KG+P FWLN ++  D +  E++E DE  L FL+DI+   +
Sbjct: 106  GAANETTDE-----SEEDKEKGVPSFWLNAMKNNDVLAEEISERDEGALKFLKDIKWSRI 160

Query: 970  SNPNRIRLEFLFECNPYFKNTVLTKTYHVQTDGKKSYMRKAIGTEIEWYFGQSPKKLLVR 791
             NP   +LEF F+ NPYF NT+LTKTYH+  D  +  + KAIGTEIEWY G+   + +++
Sbjct: 161  ENPKGFKLEFFFDTNPYFSNTILTKTYHM-IDEDEPILEKAIGTEIEWYPGKCLTQKVLK 219

Query: 790  NKPKKGSQKTKPV 752
             KPKKGS+  KP+
Sbjct: 220  KKPKKGSKNAKPI 232


Top