BLASTX nr result

ID: Coptis24_contig00003339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003339
         (1515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518795.1| cationic amino acid transporter, putative [R...   438   e-126
ref|XP_002278606.1| PREDICTED: uncharacterized amino acid permea...   445   e-126
ref|XP_002300432.1| cationic amino acid transporter [Populus tri...   435   e-126
emb|CBI27075.3| unnamed protein product [Vitis vinifera]              443   e-126
ref|XP_002303714.1| cationic amino acid transporter [Populus tri...   436   e-124

>ref|XP_002518795.1| cationic amino acid transporter, putative [Ricinus communis]
            gi|223542176|gb|EEF43720.1| cationic amino acid
            transporter, putative [Ricinus communis]
          Length = 575

 Score =  438 bits (1126), Expect(2) = e-126
 Identities = 221/358 (61%), Positives = 275/358 (76%), Gaps = 3/358 (0%)
 Frame = -1

Query: 1275 EENEAKSYWTWSKHDFYPEPSFQSWQTYKTALSQTGHRLKDRFLDRSSNTQEL-EVRKES 1099
            ++   KSYW W K DF+PEP+FQ+  TY  ALSQT  RLKDR L RSS T EL  ++KES
Sbjct: 4    QDQPIKSYWRWRKQDFFPEPTFQNLSTYTCALSQTYPRLKDRLLSRSSETNELVTLQKES 63

Query: 1098 VNEMKRCLSWWDLIWLSFGSVVGTGIFVLTGQEAH-NHAAIVLSYAISGLSALLSVFCYT 922
             N +++CL+WWDL+WLSFGSVVG+GIFV+TGQEA  +  AI+LSYAISGLSALLSVFCYT
Sbjct: 64   ENPLRKCLTWWDLMWLSFGSVVGSGIFVITGQEARVSGPAILLSYAISGLSALLSVFCYT 123

Query: 921  EFAVEIPVAGGSFSFLRIELGDFVAFIAAGIIXXXXXXXXXXXARSWTSYFATFIN-RQP 745
            EFAVEIPVAGGSFS+LRIELGDF+AF+AAG I            RSW+SYFA+ IN +  
Sbjct: 124  EFAVEIPVAGGSFSYLRIELGDFIAFLAAGNILLEGVVGAAGLGRSWSSYFASMINTKNS 183

Query: 744  DSLRFHVSAFADGFNLLDPLAVAVLCTLSAIPMFGSRKTSLLNWIAAMLSXXXXXXXXXX 565
            D LR  + +F DGFNLLDP+AV VL   + I M G+++TS LNW++++++          
Sbjct: 184  DFLRIRIDSFPDGFNLLDPIAVVVLLVANTIAMTGTKRTSTLNWLSSVVTACIIVFIIVV 243

Query: 564  XXVKGDASNLSPFVPYGAGGVFKASAVLFWAYTGFDMVATMAEETKKPSRGIPIGLIGSM 385
              V G +SNL PF P G  GVF+A+AV++W+YTGFDMVATMAEET+KPSR IPIGL+GSM
Sbjct: 244  GLVHGKSSNLVPFFPSGPKGVFEAAAVVYWSYTGFDMVATMAEETEKPSRDIPIGLVGSM 303

Query: 384  SMITLVYCLMALSLSMLVKYINMDVNAAFSVAFKSVGMNWANYIVSFGALKGMTTRLL 211
            SMIT+VYCLMAL+L+++VKY  ++ +AA+SVAF  +GMNWA Y+VS  ALKGMTT LL
Sbjct: 304  SMITVVYCLMALALTIMVKYTEINADAAYSVAFAQIGMNWAKYLVSICALKGMTTSLL 361



 Score = 43.5 bits (101), Expect(2) = e-126
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = -3

Query: 217 ITTGLMVGALGQGRCTTQIARSHMI 143
           +TT L+VG+LGQGR TTQIARSHMI
Sbjct: 356 MTTSLLVGSLGQGRYTTQIARSHMI 380


>ref|XP_002278606.1| PREDICTED: uncharacterized amino acid permease YfnA-like [Vitis
            vinifera]
          Length = 571

 Score =  445 bits (1145), Expect(2) = e-126
 Identities = 223/352 (63%), Positives = 268/352 (76%), Gaps = 2/352 (0%)
 Frame = -1

Query: 1260 KSYWTWSKHDFYPEPSFQSWQTYKTALSQTGHRLKDRFLDRSSNTQELEVRKESVNEMKR 1081
            +SYW WSK DF+PE SFQ+  +YKTALS T  RLKDR L+RSS   E+ + +ES N MK+
Sbjct: 12   RSYWRWSKQDFFPEESFQNLASYKTALSHTCFRLKDRLLNRSSVANEMLLFQESENAMKK 71

Query: 1080 CLSWWDLIWLSFGSVVGTGIFVLTGQEAHNHA--AIVLSYAISGLSALLSVFCYTEFAVE 907
            CL+WWDL+W+SFGSVVG+GIFV+TGQE    A  AI+LSYA+SG SALLSV CYTEFAVE
Sbjct: 72   CLTWWDLVWMSFGSVVGSGIFVITGQETRYDAGPAIILSYAVSGFSALLSVLCYTEFAVE 131

Query: 906  IPVAGGSFSFLRIELGDFVAFIAAGIIXXXXXXXXXXXARSWTSYFATFINRQPDSLRFH 727
            IPVAGGSFS+LR+ELGDFVAFIAAG I           ARSW+SYFA+ IN   D LR  
Sbjct: 132  IPVAGGSFSYLRVELGDFVAFIAAGNILLEAIVGAAGLARSWSSYFASMINTDTDFLRIR 191

Query: 726  VSAFADGFNLLDPLAVAVLCTLSAIPMFGSRKTSLLNWIAAMLSXXXXXXXXXXXXVKGD 547
            VS FADGFNLLDP+A  VL     I M G+R+TS+LNWI+++LS            ++G 
Sbjct: 192  VSYFADGFNLLDPIAAVVLLIADGIAMSGTRRTSILNWISSVLSFMVILFIIVIGFIRGK 251

Query: 546  ASNLSPFVPYGAGGVFKASAVLFWAYTGFDMVATMAEETKKPSRGIPIGLIGSMSMITLV 367
             SNL PF PYGA GVF+A+AV++W+YTGFDMVATMAEETK P+R IP+GL+GSMSMIT+V
Sbjct: 252  TSNLVPFFPYGARGVFRAAAVVYWSYTGFDMVATMAEETKNPTRDIPLGLVGSMSMITVV 311

Query: 366  YCLMALSLSMLVKYINMDVNAAFSVAFKSVGMNWANYIVSFGALKGMTTRLL 211
            YCLMAL LSM+ KY  +D NAA+SV F+ +GM WA Y+VS  ALKGMTT +L
Sbjct: 312  YCLMALVLSMMQKYNEVDANAAYSVVFEKIGMTWAKYLVSICALKGMTTSML 363



 Score = 36.2 bits (82), Expect(2) = e-126
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = -3

Query: 217 ITTGLMVGALGQGRCTTQIARSHMI 143
           +TT +++G LGQ R  TQIAR+HMI
Sbjct: 358 MTTSMLIGGLGQARYMTQIARAHMI 382


>ref|XP_002300432.1| cationic amino acid transporter [Populus trichocarpa]
            gi|222847690|gb|EEE85237.1| cationic amino acid
            transporter [Populus trichocarpa]
          Length = 577

 Score =  435 bits (1119), Expect(2) = e-126
 Identities = 218/360 (60%), Positives = 277/360 (76%), Gaps = 4/360 (1%)
 Frame = -1

Query: 1278 MEENEAKSYWTWSKHDFYPEPSFQSWQTYKTALSQTGHRLKDRFLDRSSNTQEL-EVRKE 1102
            ++++  KSYW  SK DF+PEPSF+   +Y+TALSQ   RLKDR L RS+ T EL  +R+E
Sbjct: 3    VQDSPRKSYWRCSKQDFFPEPSFKDLSSYRTALSQICPRLKDRLLSRSTETHELVTLRRE 62

Query: 1101 SVNEMKRCLSWWDLIWLSFGSVVGTGIFVLTGQEAHNHA--AIVLSYAISGLSALLSVFC 928
            S N M++CL+WWDL+W+SFGSVVG+GIFV+TGQEA ++A  AIVLSYA+SG SALLSVFC
Sbjct: 63   SENPMQKCLTWWDLMWMSFGSVVGSGIFVITGQEARDNAGPAIVLSYALSGFSALLSVFC 122

Query: 927  YTEFAVEIPVAGGSFSFLRIELGDFVAFIAAGIIXXXXXXXXXXXARSWTSYFATFIN-R 751
            YTEFAVEIPVAGGSFS+LR+ELGDF+A++AAG I            RSW+SYFA+ IN +
Sbjct: 123  YTEFAVEIPVAGGSFSYLRVELGDFIAYLAAGNILLEAIIGAAGLGRSWSSYFASMINSK 182

Query: 750  QPDSLRFHVSAFADGFNLLDPLAVAVLCTLSAIPMFGSRKTSLLNWIAAMLSXXXXXXXX 571
             PD +R  + +FADGFNLLDPLAV VL   ++I M G+++TS LNWIA++ +        
Sbjct: 183  NPDFMRIKIDSFADGFNLLDPLAVVVLLVANSIAMSGTKRTSFLNWIASIATAFIIAFII 242

Query: 570  XXXXVKGDASNLSPFVPYGAGGVFKASAVLFWAYTGFDMVATMAEETKKPSRGIPIGLIG 391
                +   +SNL P+ P GA GVF ++AV++WAYTGFDMVATMAEETK PSR IPIGL+G
Sbjct: 243  VVGFIHFKSSNLVPYFPKGAEGVFVSAAVVYWAYTGFDMVATMAEETKNPSRDIPIGLVG 302

Query: 390  SMSMITLVYCLMALSLSMLVKYINMDVNAAFSVAFKSVGMNWANYIVSFGALKGMTTRLL 211
            SMS+IT++YCLMA++L+ +VKY  +D NAAFSVAF  +GMNWA Y+VS  ALKGMTT L+
Sbjct: 303  SMSIITVIYCLMAMALTGMVKYTEIDPNAAFSVAFAQIGMNWATYLVSICALKGMTTSLM 362



 Score = 44.7 bits (104), Expect(2) = e-126
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 217 ITTGLMVGALGQGRCTTQIARSHMI 143
           +TT LMVG+LGQGR TTQIARSHMI
Sbjct: 357 MTTSLMVGSLGQGRYTTQIARSHMI 381


>emb|CBI27075.3| unnamed protein product [Vitis vinifera]
          Length = 885

 Score =  443 bits (1139), Expect(2) = e-126
 Identities = 222/350 (63%), Positives = 266/350 (76%), Gaps = 2/350 (0%)
 Frame = -1

Query: 1254 YWTWSKHDFYPEPSFQSWQTYKTALSQTGHRLKDRFLDRSSNTQELEVRKESVNEMKRCL 1075
            YW WSK DF+PE SFQ+  +YKTALS T  RLKDR L+RSS   E+ + +ES N MK+CL
Sbjct: 4    YWRWSKQDFFPEESFQNLASYKTALSHTCFRLKDRLLNRSSVANEMLLFQESENAMKKCL 63

Query: 1074 SWWDLIWLSFGSVVGTGIFVLTGQEAHNHA--AIVLSYAISGLSALLSVFCYTEFAVEIP 901
            +WWDL+W+SFGSVVG+GIFV+TGQE    A  AI+LSYA+SG SALLSV CYTEFAVEIP
Sbjct: 64   TWWDLVWMSFGSVVGSGIFVITGQETRYDAGPAIILSYAVSGFSALLSVLCYTEFAVEIP 123

Query: 900  VAGGSFSFLRIELGDFVAFIAAGIIXXXXXXXXXXXARSWTSYFATFINRQPDSLRFHVS 721
            VAGGSFS+LR+ELGDFVAFIAAG I           ARSW+SYFA+ IN   D LR  VS
Sbjct: 124  VAGGSFSYLRVELGDFVAFIAAGNILLEAIVGAAGLARSWSSYFASMINTDTDFLRIRVS 183

Query: 720  AFADGFNLLDPLAVAVLCTLSAIPMFGSRKTSLLNWIAAMLSXXXXXXXXXXXXVKGDAS 541
             FADGFNLLDP+A  VL     I M G+R+TS+LNWI+++LS            ++G  S
Sbjct: 184  YFADGFNLLDPIAAVVLLIADGIAMSGTRRTSILNWISSVLSFMVILFIIVIGFIRGKTS 243

Query: 540  NLSPFVPYGAGGVFKASAVLFWAYTGFDMVATMAEETKKPSRGIPIGLIGSMSMITLVYC 361
            NL PF PYGA GVF+A+AV++W+YTGFDMVATMAEETK P+R IP+GL+GSMSMIT+VYC
Sbjct: 244  NLVPFFPYGARGVFRAAAVVYWSYTGFDMVATMAEETKNPTRDIPLGLVGSMSMITVVYC 303

Query: 360  LMALSLSMLVKYINMDVNAAFSVAFKSVGMNWANYIVSFGALKGMTTRLL 211
            LMAL LSM+ KY  +D NAA+SV F+ +GM WA Y+VS  ALKGMTT +L
Sbjct: 304  LMALVLSMMQKYNEVDANAAYSVVFEKIGMTWAKYLVSICALKGMTTSML 353



 Score = 36.2 bits (82), Expect(2) = e-126
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = -3

Query: 217 ITTGLMVGALGQGRCTTQIARSHMI 143
           +TT +++G LGQ R  TQIAR+HMI
Sbjct: 348 MTTSMLIGGLGQARYMTQIARAHMI 372


>ref|XP_002303714.1| cationic amino acid transporter [Populus trichocarpa]
            gi|222841146|gb|EEE78693.1| cationic amino acid
            transporter [Populus trichocarpa]
          Length = 583

 Score =  436 bits (1122), Expect(2) = e-124
 Identities = 219/358 (61%), Positives = 269/358 (75%), Gaps = 3/358 (0%)
 Frame = -1

Query: 1275 EENEAKSYWTWSKHDFYPEPSFQSWQTYKTALSQTGHRLKDRFLDRSSNTQEL-EVRKES 1099
            +E + KSYW +SK DF PE SFQSW  Y++ALS+T  R KDR + RS +  E+ E+RK+S
Sbjct: 3    DEIQHKSYWRFSKQDFLPEESFQSWGNYRSALSETCFRFKDRLISRSDDVNEIGELRKQS 62

Query: 1098 VNEMKRCLSWWDLIWLSFGSVVGTGIFVLTGQEAHNHA--AIVLSYAISGLSALLSVFCY 925
             NEMKRCL+WWDL W  FGSVVG GIFVLTGQEAH HA  AIVLSY  SG+SA+LSVFCY
Sbjct: 63   ENEMKRCLTWWDLTWFGFGSVVGAGIFVLTGQEAHEHAGPAIVLSYVASGVSAMLSVFCY 122

Query: 924  TEFAVEIPVAGGSFSFLRIELGDFVAFIAAGIIXXXXXXXXXXXARSWTSYFATFINRQP 745
            TEFAVE+PVAGGSF++LRIELGDFVAFI AG I           AR+WTSYF   +NR  
Sbjct: 123  TEFAVEVPVAGGSFAYLRIELGDFVAFITAGNILLESIAGSAAVARAWTSYFTNLLNRPS 182

Query: 744  DSLRFHVSAFADGFNLLDPLAVAVLCTLSAIPMFGSRKTSLLNWIAAMLSXXXXXXXXXX 565
            +SLR H +  A+GFNLLDP+AV VL   + I +  +RKTSL+NWIA  L+          
Sbjct: 183  NSLRIHTN-LAEGFNLLDPIAVGVLVIAATIAIISTRKTSLINWIATALNTAVILFVIIA 241

Query: 564  XXVKGDASNLSPFVPYGAGGVFKASAVLFWAYTGFDMVATMAEETKKPSRGIPIGLIGSM 385
                 + SNL PF+P+GA G+F+A+A++++AY GFD +ATMAEETK PSR IPIGL+GSM
Sbjct: 242  GFAHANTSNLKPFLPFGAKGIFQAAAIVYFAYGGFDNIATMAEETKNPSRDIPIGLLGSM 301

Query: 384  SMITLVYCLMALSLSMLVKYINMDVNAAFSVAFKSVGMNWANYIVSFGALKGMTTRLL 211
            S+IT++YCLMAL+LSM+ KY  +D  AA+SVAF+SVGMNWA Y+V+ GALKGMTT LL
Sbjct: 302  SIITVIYCLMALTLSMMQKYTEIDKGAAYSVAFQSVGMNWARYLVALGALKGMTTVLL 359



 Score = 38.1 bits (87), Expect(2) = e-124
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = -3

Query: 217 ITTGLMVGALGQGRCTTQIARSHMI 143
           +TT L+VGALGQ R TT IAR+HMI
Sbjct: 354 MTTVLLVGALGQARYTTHIARAHMI 378


Top