BLASTX nr result
ID: Coptis24_contig00003334
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00003334
(222 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517677.1| receptor-kinase, putative [Ricinus communis]... 94 9e-18
ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine... 94 2e-17
emb|CAN63094.1| hypothetical protein VITISV_020143 [Vitis vinifera] 93 2e-17
ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine... 87 1e-15
ref|XP_002442559.1| hypothetical protein SORBIDRAFT_08g021940 [S... 87 2e-15
>ref|XP_002517677.1| receptor-kinase, putative [Ricinus communis]
gi|223543309|gb|EEF44841.1| receptor-kinase, putative
[Ricinus communis]
Length = 2793
Score = 94.4 bits (233), Expect = 9e-18
Identities = 46/71 (64%), Positives = 56/71 (78%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
L NNT +GEIP+NLT+C++LR I L N LSG IPA+LGSL KLE L + NKLTG +P+
Sbjct: 256 LINNTLQGEIPINLTRCSQLRVIGLLGNNLSGKIPAELGSLLKLEVLSLSMNKLTGEIPA 315
Query: 182 SLGNLSSLQVF 214
SLGNLSSL +F
Sbjct: 316 SLGNLSSLTIF 326
Score = 57.0 bits (136), Expect = 2e-06
Identities = 27/72 (37%), Positives = 44/72 (61%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
++ N F G +P + +L+ ++L N+LSG IP+ LG+L+ L L + RN G +PS
Sbjct: 526 MHYNLFTGVVPSYFGKFQKLQVLDLFGNRLSGRIPSSLGNLTGLSMLYLSRNLFEGSIPS 585
Query: 182 SLGNLSSLQVFS 217
S+GNL +L +
Sbjct: 586 SIGNLKNLNTLA 597
Score = 56.6 bits (135), Expect = 2e-06
Identities = 29/71 (40%), Positives = 41/71 (57%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
L N GEIP + E+R +NLS+N LSG+IP +L LE L ++ N L+G +P+
Sbjct: 1725 LSRNELRGEIPSEIGDIQEIRSLNLSYNHLSGSIPFSFSNLKNLESLDLRNNSLSGEIPT 1784
Query: 182 SLGNLSSLQVF 214
L L+ L F
Sbjct: 1785 QLVELNFLGTF 1795
Score = 55.5 bits (132), Expect = 5e-06
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
L +N G IP+ L +E+ +N+S+N+L G IP +L++LE L + L+G +PS
Sbjct: 2596 LSHNNLIGVIPLELGMLSEILALNISYNRLVGYIPVSFSNLTQLESLDLSHYSLSGQIPS 2655
Query: 182 SLGNLSSLQVFS 217
L NL L+VFS
Sbjct: 2656 ELINLHFLEVFS 2667
Score = 54.7 bits (130), Expect = 8e-06
Identities = 28/68 (41%), Positives = 38/68 (55%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
L+ N G IP +L T L + LS N G+IP+ +G+L L L I NKLTG +P
Sbjct: 550 LFGNRLSGRIPSSLGNLTGLSMLYLSRNLFEGSIPSSIGNLKNLNTLAISHNKLTGAIPH 609
Query: 182 SLGNLSSL 205
+ L+SL
Sbjct: 610 EILGLTSL 617
>ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At3g47570 [Vitis vinifera]
Length = 1009
Score = 93.6 bits (231), Expect = 2e-17
Identities = 46/72 (63%), Positives = 57/72 (79%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
L NN+FEG++P NLT C+ELR +NL NKL G IP +LGSLSKL+ L + RN LTG +P+
Sbjct: 130 LSNNSFEGKVPTNLTYCSELRVLNLIDNKLEGKIPEELGSLSKLKALGLTRNNLTGKIPA 189
Query: 182 SLGNLSSLQVFS 217
SLGNLSSL +FS
Sbjct: 190 SLGNLSSLSLFS 201
Score = 61.2 bits (147), Expect = 8e-08
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = +2
Query: 11 NTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPSSLG 190
N G IP + L ++NL+ N L+G+IP+ +G L K++ L++ N+L+G++PSSLG
Sbjct: 380 NQIHGTIPSGIKNLVNLTFLNLARNHLTGSIPSNIGKLYKIQVLLLLGNRLSGIIPSSLG 439
Query: 191 NLSSL 205
NL+ L
Sbjct: 440 NLTLL 444
Score = 55.1 bits (131), Expect = 6e-06
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
L N FEGEIP +L L Y++LS NK SG IP LG L L +L + N+L G +PS
Sbjct: 545 LTGNFFEGEIPTSLQTLRGLEYLDLSRNKFSGRIPMFLGDLPFLTYLNLSFNELEGEVPS 604
Query: 182 SLGNLS 199
N++
Sbjct: 605 VKANVT 610
>emb|CAN63094.1| hypothetical protein VITISV_020143 [Vitis vinifera]
Length = 1009
Score = 93.2 bits (230), Expect = 2e-17
Identities = 46/72 (63%), Positives = 57/72 (79%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
L NN+FEG++P NLT C+ELR +NL NKL G IP +LGSLSKL+ L + RN LTG +P+
Sbjct: 130 LSNNSFEGKVPTNLTYCSELRVLNLIDNKLEGKIPEELGSLSKLKALGLXRNNLTGKIPA 189
Query: 182 SLGNLSSLQVFS 217
SLGNLSSL +FS
Sbjct: 190 SLGNLSSLTLFS 201
Score = 61.2 bits (147), Expect = 8e-08
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = +2
Query: 11 NTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPSSLG 190
N G IP + L ++NL+ N L+G+IP+ +G L K++ L++ N+L+G++PSSLG
Sbjct: 380 NQIHGTIPSGIKNLVNLTFLNLARNHLTGSIPSNIGKLYKIQVLLLLGNRLSGIIPSSLG 439
Query: 191 NLSSL 205
NL+ L
Sbjct: 440 NLTLL 444
Score = 55.1 bits (131), Expect = 6e-06
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
L N FEGEIP +L L Y++LS NK SG IP LG L L +L + N+L G +PS
Sbjct: 545 LTGNFFEGEIPTSLQTLRGLEYLDLSRNKFSGRIPMFLGDLPFLTYLNLSFNELEGEVPS 604
Query: 182 SLGNLS 199
N++
Sbjct: 605 VKANVT 610
>ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At3g47570-like, partial [Vitis vinifera]
Length = 965
Score = 87.0 bits (214), Expect = 1e-15
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
L NN+ GEIP NL+ C++L YI + WN+L G IPA+LGSLSKL++L I N L+G +P
Sbjct: 64 LSNNSLSGEIPANLSSCSKLMYIYVGWNRLVGKIPAELGSLSKLQYLFIHANSLSGGIPR 123
Query: 182 SLGNLSSLQVFS 217
S GNLSSL+ S
Sbjct: 124 SFGNLSSLERLS 135
Score = 59.3 bits (142), Expect = 3e-07
Identities = 29/68 (42%), Positives = 41/68 (60%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
L N G IP + L + + N+LSG+IP +G L L L++ +NKL+G+LPS
Sbjct: 311 LDGNKIGGSIPAGIGNLVSLERLEMWENQLSGSIPVDIGKLQNLRVLMLIKNKLSGILPS 370
Query: 182 SLGNLSSL 205
SLGNL +L
Sbjct: 371 SLGNLENL 378
Score = 57.8 bits (138), Expect = 9e-07
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
L N F EIP + L+ + LS N LSG IPA L S SKL ++ + N+L G +P+
Sbjct: 40 LEENGFNHEIPPEIGHLRRLQMLFLSNNSLSGEIPANLSSCSKLMYIYVGWNRLVGKIPA 99
Query: 182 SLGNLSSLQ 208
LG+LS LQ
Sbjct: 100 ELGSLSKLQ 108
Score = 55.8 bits (133), Expect = 4e-06
Identities = 29/68 (42%), Positives = 41/68 (60%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
++ N G IPV++ + LR + L NKLSG +P+ LG+L L LV+ RN G +PS
Sbjct: 335 MWENQLSGSIPVDIGKLQNLRVLMLIKNKLSGILPSSLGNLENLIQLVLGRNYFQGKIPS 394
Query: 182 SLGNLSSL 205
SLG +L
Sbjct: 395 SLGKCQNL 402
>ref|XP_002442559.1| hypothetical protein SORBIDRAFT_08g021940 [Sorghum bicolor]
gi|241943252|gb|EES16397.1| hypothetical protein
SORBIDRAFT_08g021940 [Sorghum bicolor]
Length = 1057
Score = 86.7 bits (213), Expect = 2e-15
Identities = 44/71 (61%), Positives = 50/71 (70%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
L N F G+IPVNL+ C ELR N+S N LSG IP GSLSKLEFL + R+ LTG +P
Sbjct: 170 LQQNGFHGDIPVNLSNCKELRVFNISVNTLSGGIPPSFGSLSKLEFLGLHRSNLTGGIPP 229
Query: 182 SLGNLSSLQVF 214
SLGNLSSL F
Sbjct: 230 SLGNLSSLLAF 240
Score = 56.6 bits (135), Expect = 2e-06
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCTELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLPS 181
L NN GE+P L+QC + Y+ L N+L G IP L S+ L++L + +N L+G +P
Sbjct: 564 LSNNRLSGEVPQALSQCEAMEYLFLQGNQLVGRIPQSLSSMKGLQYLDMSQNNLSGSIPD 623
Query: 182 SLGNLSSLQ 208
L L L+
Sbjct: 624 YLSTLQYLR 632
Score = 56.2 bits (134), Expect = 3e-06
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 LYNNTFEGEIPVNLTQCT-ELRYINLSWNKLSGNIPAKLGSLSKLEFLVIQRNKLTGVLP 178
L NN F+G +P +L T E++ I ++ NK+SG+IP ++G S L + + N LTG +P
Sbjct: 393 LSNNRFQGVLPPSLVNLTIEIQQILMNGNKISGSIPTEIGKFSNLRVIALADNALTGTIP 452
Query: 179 SSLGNLSSL 205
++G L ++
Sbjct: 453 DTIGGLHNM 461