BLASTX nr result

ID: Coptis24_contig00003333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003333
         (1806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK01782.1| predicted protein [Hordeum vulgare subsp. vulgare]    407   e-111
gb|ADE76156.1| unknown [Picea sitchensis]                             405   e-110
ref|XP_003560507.1| PREDICTED: uncharacterized protein LOC100846...   402   e-109
gb|ABR16643.1| unknown [Picea sitchensis]                             400   e-109
ref|NP_001058463.1| Os06g0697600 [Oryza sativa Japonica Group] g...   394   e-107

>dbj|BAK01782.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 500

 Score =  407 bits (1046), Expect = e-111
 Identities = 222/486 (45%), Positives = 317/486 (65%), Gaps = 31/486 (6%)
 Frame = -2

Query: 1646 MELVMDWKSLGSLLATFIFIRTALRDFLPPVVYQYLKCIISNSFTALQT-NVSIVIEEFE 1470
            ME+ +DW+S+GSL+AT +  RTA+RDF+PP   Q+L+ +++   TA +    +I+I+E +
Sbjct: 1    MEMFLDWRSVGSLIATVMVFRTAMRDFIPPEAEQWLRRLLARLATAFRAPTATILIDEAD 60

Query: 1469 SCLN--TNEIFEAVQTYLGSQCISSARVLKLSKPNNFKNLTFTMSTDQIVEDTFEGFKVK 1296
               +  TN++++A Q YLGS+C+++A  ++L KP        ++      +DTF+G +VK
Sbjct: 61   GASSGATNDLYDAAQLYLGSRCLAAAPAVRLYKPRQSDRAVASLPDAHTADDTFQGVRVK 120

Query: 1295 WSSHC--VEKNI---------SMGGYSRSLENRYFKLSFHQKYKEKVHSSYIPYINEVAQ 1149
            W+S    VE+           S GG S   ++R  +L F +++++ VH +YIP++ + A 
Sbjct: 121  WTSTARPVERGAGHNPYNVFGSRGGGSGG-DHRSLELQFPRQHRDFVHDTYIPHVIDEAT 179

Query: 1148 RIKFKNKQRKIYTNKSLEEGR-RYGLWSNVPFSHPSTFDTLAIDPVLKKDIKADLTKFVQ 972
            R++ K+++R++YTN++   G   + LW++  FSHPSTFDTLA+DP L+++I+ADL +F  
Sbjct: 180  RMRLKSRERRLYTNRAAAPGDDHHRLWTSHTFSHPSTFDTLAVDPALREEIRADLLRFAA 239

Query: 971  RSEYYNRVGRAWKRGYLLYGPPGTGKTSLIAAVANFLEFDIYDLELTAVASNSQLRKLLI 792
            R E+Y RVGRAWKRGYLL+GPPGTGKTSL+AA+AN LEFD+YDLELT V +NS LR+LL+
Sbjct: 240  RREHYARVGRAWKRGYLLHGPPGTGKTSLVAAIANLLEFDVYDLELTTVPTNSHLRRLLV 299

Query: 791  STSSKSVIVVEDIDCSLDLSDRVKEQ-NVEVNNTE----DEANSIKCNRRVKGTVSLSGV 627
            ST+ KSV+VVEDIDCSLDLSDR K     + +N +      A +       + ++SLSGV
Sbjct: 300  STTPKSVVVVEDIDCSLDLSDRKKNSGGADEDNAQLAMLSPAAAAAMAAIGRESISLSGV 359

Query: 626  LNFVDGLWSSCGGERLIIFTTNHKEKLDQALLRPGRMDKHXXXXXXXXXXXXXXXXXXXR 447
            LNFVDGLWSSC GERL+IFTTNH E+LD ALLRPG                        R
Sbjct: 360  LNFVDGLWSSCVGERLMIFTTNHPERLDPALLRPG------------------------R 395

Query: 446  MDKHINLTYCEIEAFKMLAKNYLGINK----------HHLMKEVEVMLPV-IKMTPADIG 300
            MD+ I L YC   A ++LAKNYLG+ +            LM E E +L   +++TPADIG
Sbjct: 396  MDRKIELGYCTPAALRVLAKNYLGVGEDPDDEPGAVVDGLMAEAEGLLAADVRITPADIG 455

Query: 299  EIFMSC 282
            E+FM C
Sbjct: 456  EVFMGC 461


>gb|ADE76156.1| unknown [Picea sitchensis]
          Length = 478

 Score =  405 bits (1041), Expect = e-110
 Identities = 212/456 (46%), Positives = 299/456 (65%), Gaps = 9/456 (1%)
 Frame = -2

Query: 1628 WKSLGSLLATFIFIRTALRDFLPPVVYQYLKCIISNSFTALQTNVSIVIEEFESCLNTNE 1449
            W +LGS++A  IFIRT  +++LPP  Y +L   + +    + +++S+VIEE +  +  +E
Sbjct: 4    WSNLGSIMAAVIFIRTMAKEYLPPEFYGFLSKSLRSLIGIVSSHISVVIEENDG-MKVSE 62

Query: 1448 IFEAVQTYLGSQCISSARVLKLSKPNNFKNLTFTMSTDQIVEDTFEGFKVKWSSHCVEKN 1269
            ++EAVQTYL  +  S+A+ LKL KP + K  TF+M+ ++ + + +EG KV W  H  E+ 
Sbjct: 63   VYEAVQTYLSVRSCSAAKRLKLKKPQHNKEFTFSMARNEQIAEEYEGIKVWWVFHSSERK 122

Query: 1268 --ISMGGYSRSLENRYFKLSFHQKYKEKVHSSYIPYINEVAQRIKFKNKQRKIYTNKSLE 1095
              I     S S E RY+KL+FH+K+K  +   Y+P++   A+ ++ +++ RKIYTN+S  
Sbjct: 123  QQIMFSWNSTSEEKRYYKLTFHKKHKHIIFDQYLPHVMAEAKTLEIRSRYRKIYTNQSNS 182

Query: 1094 EGRRYG--LWSNVPFSHPSTFDTLAIDPVLKKDIKADLTKFVQRSEYYNRVGRAWKRGYL 921
                Y   +W+ V F HP+TF TLA++P LK+DI  DL +F++  +YY +VGRAWKRGYL
Sbjct: 183  RDYEYRNRVWTPVVFDHPATFGTLALEPELKQDIMEDLQRFLRGEKYYRQVGRAWKRGYL 242

Query: 920  LYGPPGTGKTSLIAAVANFLEFDIYDLELTAVASNSQLRKLLISTSSKSVIVVEDIDCSL 741
            LYGPPGTGK+S+IAA+ANFL++DIYDLELT V +N++LRKLL +T++KS+IV+EDIDCSL
Sbjct: 243  LYGPPGTGKSSMIAAMANFLDYDIYDLELTQVKNNTELRKLLFTTTNKSIIVIEDIDCSL 302

Query: 740  DLSDRVKEQNVEVNNTEDEANSI--KCNRRVK---GTVSLSGVLNFVDGLWSSCGGERLI 576
            DLSDR K++  + +  EDE  S   K + R       V+LSGVLNF DGLWS CG ERL 
Sbjct: 303  DLSDRKKKKKPQKDGEEDEKPSKPGKPDERESNEDSKVTLSGVLNFTDGLWSCCGSERLF 362

Query: 575  IFTTNHKEKLDQALLRPGRMDKHXXXXXXXXXXXXXXXXXXXRMDKHINLTYCEIEAFKM 396
            +FTTNH ++LD ALLR G                        RMDKHI LT+C   AFK+
Sbjct: 363  VFTTNHVDRLDPALLRSG------------------------RMDKHILLTFCTFGAFKI 398

Query: 395  LAKNYLGINKHHLMKEVEVMLPVIKMTPADIGEIFM 288
            LA+NYL I  H L  ++  +    +MTPAD+ E  M
Sbjct: 399  LARNYLSIEDHELFPDIGDLTEAAQMTPADVTEHLM 434


>ref|XP_003560507.1| PREDICTED: uncharacterized protein LOC100846466 [Brachypodium
            distachyon]
          Length = 667

 Score =  402 bits (1032), Expect = e-109
 Identities = 223/499 (44%), Positives = 310/499 (62%), Gaps = 44/499 (8%)
 Frame = -2

Query: 1646 MELVMDWKSLGSLLATFIFIRTALRDFLPPVVYQYLKCIISNSFTALQTNVSIV-IEEFE 1470
            ME+V+DW+S+GSL+AT +  RTALRD +PP   ++L+ +++    A +  +  + I+E +
Sbjct: 1    MEMVLDWRSVGSLIATAMVFRTALRDLIPPEAERWLRLLVARVAAAFRGPLGTIHIDEAD 60

Query: 1469 SCLNT----NEIFEAVQTYLGSQCISSARVLKLSKPNNFKNLTFTMSTDQIVEDTFEGFK 1302
                     N++++A Q YLGS+C+++A  ++L KP    +   ++       DTF G +
Sbjct: 61   HGATAGGAANDLYDAAQLYLGSRCLATAPAVRLYKPRQASHAVASLPDAHTTTDTFRGVR 120

Query: 1301 VKWSSHCVEKNI------------SMGGYSRSLENRYFKLSFHQKYKEKVHSSYIPYINE 1158
            VKW+S     N             S  G S  +E R  +L+F ++++E VH  YI ++  
Sbjct: 121  VKWTSTARPANNNNPNPYNPFARGSSSGGSSGVEQRSLELTFPRQHRELVHEQYIEHVIG 180

Query: 1157 VAQRIKFKNKQRKIYTNKSLEEGRRY----GLWSNVPFSHPSTFDTLAIDPVLKKDIKAD 990
            VA  ++ K+++R++YTN++   G  +    GLW++  F+HPSTF TLA+DP L+ +I+AD
Sbjct: 181  VATTMRLKSRERRLYTNRATSPGDEHHSHRGLWTSHAFAHPSTFGTLAVDPALRDEIRAD 240

Query: 989  LTKFVQRSEYYNRVGRAWKRGYLLYGPPGTGKTSLIAAVANFLEFDIYDLELTAVASNSQ 810
            LT+F  R E+Y RVGRAWKRGYLL+GPPGTGKTSL+AA+AN LEFD+YDLELT V +NS 
Sbjct: 241  LTRFAGRREHYARVGRAWKRGYLLHGPPGTGKTSLVAAIANLLEFDVYDLELTTVPTNSH 300

Query: 809  LRKLLISTSSKSVIVVEDIDCSLDLSDRVKEQNVEVNNTEDEANSIKCNRRV-------K 651
            LR+LL+ST+ KSVIVVEDIDCSLDLSDR K++N   NNT +E  +I             +
Sbjct: 301  LRRLLVSTTPKSVIVVEDIDCSLDLSDRNKKKN---NNTANEDTAILSPAAAMAAAAVGR 357

Query: 650  GTVSLSGVLNFVDGLWSSCGGERLIIFTTNHKEKLDQALLRPGRMDKHXXXXXXXXXXXX 471
             ++SLSGVLNFVDGLWSSC GERL+IFTTNH E+LD ALLRPG                 
Sbjct: 358  ESISLSGVLNFVDGLWSSCVGERLMIFTTNHPERLDPALLRPG----------------- 400

Query: 470  XXXXXXXRMDKHINLTYCEIEAFKMLAKNYLGIN---------------KHHLMKEVEVM 336
                   RMD+ I L YC   A ++LAKNYLG+                   LM E E +
Sbjct: 401  -------RMDRKIELGYCTPAALRVLAKNYLGVGVGDDPAACDDDDPGMVDALMAEAERL 453

Query: 335  LPV-IKMTPADIGEIFMSC 282
            L   +++TPADIGE+FM C
Sbjct: 454  LAADVRITPADIGEVFMGC 472


>gb|ABR16643.1| unknown [Picea sitchensis]
          Length = 473

 Score =  400 bits (1027), Expect = e-109
 Identities = 208/462 (45%), Positives = 300/462 (64%), Gaps = 7/462 (1%)
 Frame = -2

Query: 1652 LKMELVMDWKSLGSLLATFIFIRTALRDFLPPVVYQYLKCIISNSFTALQTNVSIVIEEF 1473
            +KME+   W +LGS+LAT IFIR+ +R++ P  +       +      + + +S+VIEE 
Sbjct: 1    MKMEV---WSNLGSILATLIFIRSVVREYFPRELCDLFSKSLRRLLGMVSSYISVVIEEN 57

Query: 1472 ESCLNTNEIFEAVQTYLGSQCISSARVLKLSKPNNFKNLTFTMSTDQIVEDTFEGFKVKW 1293
            +  +  +E++EAVQTYL ++  S+A  LKL KP N ++ TF+M ++Q + D FE  KV+W
Sbjct: 58   DG-MKVSEVYEAVQTYLSARSSSAAERLKLKKPKNSRDFTFSMDSNQRISDKFEDIKVRW 116

Query: 1292 SSHCVE--KNISMGGYSRSLENRYFKLSFHQKYKEKVHSSYIPYINEVAQRIKFKNKQRK 1119
            + H +E  +         S E RY++L FH+K+K K+ S Y+P++    + ++ +++ RK
Sbjct: 117  AFHSIELSQKTRSPWNPGSDEKRYYELKFHKKHKHKIFSEYLPHVITEGKNLELRSRNRK 176

Query: 1118 IYTNKSLEEGRRYGLWSNVPFSHPSTFDTLAIDPVLKKDIKADLTKFVQRSEYYNRVGRA 939
            IYTN+       Y  W++V F HP+TF TLA++   K++I  DL +F +  +YY +VGRA
Sbjct: 177  IYTNE-------YRYWTSVVFDHPATFGTLALETEQKQEILEDLERFSKAEKYYRQVGRA 229

Query: 938  WKRGYLLYGPPGTGKTSLIAAVANFLEFDIYDLELTAVASNSQLRKLLISTSSKSVIVVE 759
            WKRGYLLYGPPGTGK+S+IAA+ANFL++DIYDLELT V +N++LRKLL++T++KS+IV+E
Sbjct: 230  WKRGYLLYGPPGTGKSSMIAAMANFLDYDIYDLELTQVKNNTELRKLLVATTNKSIIVIE 289

Query: 758  DIDCSLDLSDRVKEQNVEVNNTEDEANS-----IKCNRRVKGTVSLSGVLNFVDGLWSSC 594
            DIDCSLDLSDR K++  E ++ E E  S      +   +    V+LSGVLNF DGLWS C
Sbjct: 290  DIDCSLDLSDRKKKKKPEKDSEEKEKPSEPSKPEENEPKEDSKVTLSGVLNFTDGLWSCC 349

Query: 593  GGERLIIFTTNHKEKLDQALLRPGRMDKHXXXXXXXXXXXXXXXXXXXRMDKHINLTYCE 414
            G ERL +FTTNH ++LD ALLR G                        RMDKHI LT+C+
Sbjct: 350  GSERLFVFTTNHIDRLDPALLRSG------------------------RMDKHILLTFCK 385

Query: 413  IEAFKMLAKNYLGINKHHLMKEVEVMLPVIKMTPADIGEIFM 288
              AFK LA+NYL I  H L  E++ ++  ++MTPAD+ E  M
Sbjct: 386  FGAFKTLARNYLSIEDHELFPEIQDLMEAVEMTPADVAEHLM 427


>ref|NP_001058463.1| Os06g0697600 [Oryza sativa Japonica Group]
            gi|53793233|dbj|BAD54458.1| AAA-type ATPase-like [Oryza
            sativa Japonica Group] gi|113596503|dbj|BAF20377.1|
            Os06g0697600 [Oryza sativa Japonica Group]
            gi|125598369|gb|EAZ38149.1| hypothetical protein
            OsJ_22501 [Oryza sativa Japonica Group]
          Length = 504

 Score =  394 bits (1012), Expect = e-107
 Identities = 214/492 (43%), Positives = 306/492 (62%), Gaps = 37/492 (7%)
 Frame = -2

Query: 1646 MELVMDWKSLGSLLATFIFIRTALRDFLPPVVYQYLKCIISNSFTALQTNV-SIVIEEFE 1470
            ME+V+DW+S+GSLLAT +  RTA+RDFLPP    +L+ +++    A + +V +I+I+E +
Sbjct: 1    MEMVLDWRSVGSLLATIMVFRTAMRDFLPPEAEIFLRRLLTRLAAAFRPHVGTILIDEAD 60

Query: 1469 SCLN-TNEIFEAVQTYLGSQCISSARVLKLSKPNNFKNLTFTMSTDQIVEDTFEGFKVKW 1293
                  N++++A Q YLG++C+++A  ++L KP+       ++       D F G  VKW
Sbjct: 61   GASGGANDLYDASQLYLGARCLATAPTVRLHKPHQAPRPVASLPDAHTTHDVFRGVLVKW 120

Query: 1292 SSHCVEKNISMGGYSRSLENRY--------------FKLSFHQKYKEKVHSSYIPYINEV 1155
            ++  VE+  S GG    + N Y               +L F ++++E +H  YI ++ + 
Sbjct: 121  TARPVERGASAGGGGGGVFNPYNPYGRGGGGGEPRRLELQFPRQHRELIHGHYIQHVIDE 180

Query: 1154 AQRIKFKNKQRKIYTNKSLEEGR-RYGLWSNVPFSHPSTFDTLAIDPVLKKDIKADLTKF 978
            A +++ ++++R++YTN++   G   + LW++  FSHPSTFDTLA+DP L+ DI+ADL +F
Sbjct: 181  ATKMRLRSRERRLYTNRAAAPGDDHHRLWTSHAFSHPSTFDTLAVDPALRDDIRADLLRF 240

Query: 977  VQRSEYYNRVGRAWKRGYLLYGPPGTGKTSLIAAVANFLEFDIYDLELTAVASNSQLRKL 798
              R E+Y RVGRAWKRGYLL+GPPGTGKTSL+AA+AN LEFD+YDLELT V +NS LR+L
Sbjct: 241  AARREHYARVGRAWKRGYLLHGPPGTGKTSLVAAIANLLEFDVYDLELTTVPTNSHLRRL 300

Query: 797  LISTSSKSVIVVEDIDCSLDLSDRVKEQNVEVNNTE----DEANSIKCNRRVKGTVSLSG 630
            L+ST+ KSV+VVEDIDCSLDLSDR  + + + N  +      A +       + ++SLSG
Sbjct: 301  LVSTTPKSVVVVEDIDCSLDLSDRKNKASDDENAAQLSIISPAAAAAMAAMGRESISLSG 360

Query: 629  VLNFVDGLWSSCGGERLIIFTTNHKEKLDQALLRPGRMDKHXXXXXXXXXXXXXXXXXXX 450
            VLNFVDGLWSSC GERL++FTTNH E+LD ALLRPG                        
Sbjct: 361  VLNFVDGLWSSCVGERLMVFTTNHPERLDPALLRPG------------------------ 396

Query: 449  RMDKHINLTYCEIEAFKMLAKNYLGI---------------NKHHLMKEVEVMLPV-IKM 318
            RMD+ I L YC   A ++LAKNYLG+                   LM + E +L   + +
Sbjct: 397  RMDRKIELGYCSPPALRVLAKNYLGVGVGDEGCEDAADDPDTVSGLMADAEGLLAAGVLI 456

Query: 317  TPADIGEIFMSC 282
            TPADI E+FM C
Sbjct: 457  TPADIAEVFMGC 468


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