BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003330
         (3672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isof...  1952   0.0  
ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like...  1930   0.0  
ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1a-lik...  1929   0.0  
ref|XP_002300334.1| predicted protein [Populus trichocarpa] gi|2...  1927   0.0  
ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycope...  1903   0.0  

>ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
          Length = 1089

 Score = 1952 bits (5058), Expect = 0.0
 Identities = 965/1089 (88%), Positives = 1032/1089 (94%)
 Frame = +2

Query: 65   MSSWNYAVTAHKPTNVTHSCVGNFTSPHELNLIIAKCTRIEIHLLTPQGLQAMVDVPIYG 244
            MS WNY VTAHKPTNVTHSCVGNFT P ELNLIIAKCTRIEIHLLTPQGLQ M+DVPIYG
Sbjct: 1    MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 245  RIATVELFRPYGEAQDFLFIATERYKFCVLQWDAETSDLITRAMGDVSDRIGRPTDNGQI 424
            RIAT+ELFRP+GEAQDFLFIATERYKFCVLQWDAE S++ITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAENSEVITRAMGDVSDRIGRPTDNGQI 120

Query: 425  GIIDPDCRLIGLHLYDGLFKVIPFDNRGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 604
            GIIDPDCRLIGLHLYDGLFKVIPFDN+GQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 180

Query: 605  YQDSKDARHVKTYEVALKEKDFVEGPWSQNNLDNGAGLIIPVPMPLXXXXXXXXXXXXYC 784
            YQD+KDARHVKTYEVALK+KDFVEGPW+QNNLDNGA L+IPVP PL            YC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFVEGPWAQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240

Query: 785  SATAFKAIPTRPSITRAYGRVDADGSRYXXXXXXXXXXXXVITHEKERVTGLKIELLGET 964
            SA+AFKAIP RPSIT+AYGRVDADGSRY            VITHEKE+VTGLKIELLGET
Sbjct: 241  SASAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300

Query: 965  SIASTISYLDNAFVFVGSNYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 1144
            SIASTISYLDNAFV+VGS+YGDSQLIK++LQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAFVYVGSSYGDSQLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360

Query: 1145 RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDLYDTFLVVS 1324
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDD +DTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVS 420

Query: 1325 FISETRILAMNSDDELEETEIEGFDSQVQTLFCHDAVHNQLLQVTASSVRLVNSTSRDLR 1504
            FISETRILAMN +DELEETEIEGF SQVQTLFCHDAV++QL+QVT+SSVRLV STSR+LR
Sbjct: 421  FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSRELR 480

Query: 1505 HDWKAPSGFSVNVATANATQVLLATGGGHLVYLDIGDGVLTEVKHAQLEYEVSCLDINPI 1684
            ++WKAPSG+SVNVATANATQVLLATGGGHLVYL+IGDG LTEVKHAQLEY++SCLDINPI
Sbjct: 481  NEWKAPSGYSVNVATANATQVLLATGGGHLVYLEIGDGTLTEVKHAQLEYDISCLDINPI 540

Query: 1685 GENSNSSQLAAVGMWTDMSVRIFSLPGLDLITKEHLGGEVIPRSVLLCAFEGVSYLLCAL 1864
            GEN N SQLAAVGMWTD+SVRIFSLP L+LITKE+LGGE+IPRSVLLC+FEG+ YLLCAL
Sbjct: 541  GENPNFSQLAAVGMWTDISVRIFSLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCAL 600

Query: 1865 GDGHLFNFLLNLSTGELSDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 2044
            GDGHL NFLLN+STGEL+DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFLLNMSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660

Query: 2045 LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEDELTIGTIDDIQKLHIRTIPLGEQPRRIAH 2224
            LYSNVNLKEVSHMCPFNSAAFPDSLAIAKE +LTIGTIDDIQKLHIR+IPLGE  RRI H
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGDLTIGTIDDIQKLHIRSIPLGEHARRICH 720

Query: 2225 QEQSRTFAICCMKYGQSSTEESEMHFVRLLDDQTFEFISTYPLDTYEYGCSILSCTFADD 2404
            QEQSRTFAIC +KY QSSTE+SEMHF+RLLDDQTFEFISTYPLDT+EYGCSILSC+F+DD
Sbjct: 721  QEQSRTFAICSLKYNQSSTEDSEMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 780

Query: 2405 SNSYYCLGTAYVLQEESEPSKGRILVFAVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 2584
            SN YYC+GTAYVL EE+EP+KGRILVF VEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
Sbjct: 781  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 840

Query: 2585 NQKMQLYKWMLRDDGSRELQSECGHHGHIIALYVQTRGDFIVVGDLMKSINLLIYKHEEG 2764
            NQK+QLYKWMLRDDG+RELQSE GHHGHI+ALYVQTRGDFIVVGDLMKSI+LLIYKHEEG
Sbjct: 841  NQKIQLYKWMLRDDGTRELQSESGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 900

Query: 2765 AIEERARDHNANWMTAVEILDDDVYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHL 2944
            AIEERARD+NANWM+AVEILDDD+YLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHL
Sbjct: 901  AIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHL 960

Query: 2945 GEFINRFRHGSLVMRLPDSDVGQIPTVIYGTVNGVIGVIASLPHEQYLFLEKLQSNLVKV 3124
            GEF+NRFRHGSLVMRLPDSDVGQIPTVI+GTVNGVIGVIASLPH+QY+FLEKLQ+NL KV
Sbjct: 961  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYVFLEKLQANLRKV 1020

Query: 3125 IKGVGGLSHDHWRSFNNEKKTADAKNFLDGDLIESFLDLSRKRMEEISKAMSVSVEDLCK 3304
            IKGVGGLSH+ WRSFNNEKKT DAKNFLDGDLIE+FLDL+R RM+EISKAM+VSVE+LCK
Sbjct: 1021 IKGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIETFLDLNRTRMDEISKAMAVSVEELCK 1080

Query: 3305 RVEELTRLH 3331
            RVEELTRLH
Sbjct: 1081 RVEELTRLH 1089


>ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Glycine max]
          Length = 1089

 Score = 1930 bits (4999), Expect = 0.0
 Identities = 950/1089 (87%), Positives = 1021/1089 (93%)
 Frame = +2

Query: 65   MSSWNYAVTAHKPTNVTHSCVGNFTSPHELNLIIAKCTRIEIHLLTPQGLQAMVDVPIYG 244
            M+ WNY VTAHKPTNVTHSCVGNFTSP +LNLIIAKCTRIEIHLL+PQGLQ M+DVPIYG
Sbjct: 1    MTIWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYG 60

Query: 245  RIATVELFRPYGEAQDFLFIATERYKFCVLQWDAETSDLITRAMGDVSDRIGRPTDNGQI 424
            RIAT+ELFRP+GEAQD+LFIATERYKFCVLQWD+ET +L+TRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGEAQDYLFIATERYKFCVLQWDSETGELVTRAMGDVSDRIGRPTDNGQI 120

Query: 425  GIIDPDCRLIGLHLYDGLFKVIPFDNRGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 604
            GIIDPDCRLIGLHLYDGLFKVIPFDN+GQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 180

Query: 605  YQDSKDARHVKTYEVALKEKDFVEGPWSQNNLDNGAGLIIPVPMPLXXXXXXXXXXXXYC 784
            YQD+KDARHVKTYEVALK+KDFVEGPWSQNNLDNGA L+IPVP PL            YC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240

Query: 785  SATAFKAIPTRPSITRAYGRVDADGSRYXXXXXXXXXXXXVITHEKERVTGLKIELLGET 964
            SA AFKAIP RPSIT+AYGRVD DGSRY            VI HEKE+VTGLKIE LGET
Sbjct: 241  SANAFKAIPIRPSITKAYGRVDPDGSRYLLGDHTGLVSLLVIIHEKEKVTGLKIEPLGET 300

Query: 965  SIASTISYLDNAFVFVGSNYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 1144
            SIASTISYLDNAFV+VGS+YGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAFVYVGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 360

Query: 1145 RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDLYDTFLVVS 1324
            RQGQGQVVTCSGAYKDGSLR+VRNGIGINEQASVELQGIKGMWSLRSSTDD +DTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420

Query: 1325 FISETRILAMNSDDELEETEIEGFDSQVQTLFCHDAVHNQLLQVTASSVRLVNSTSRDLR 1504
            FISETRILAMN +DELEETEIEGF SQVQTLFCHDAVHNQL+QVT+SSVRLV+ST+RDLR
Sbjct: 421  FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRDLR 480

Query: 1505 HDWKAPSGFSVNVATANATQVLLATGGGHLVYLDIGDGVLTEVKHAQLEYEVSCLDINPI 1684
            ++W APSG+SVNVATANATQVLLATGGGHLVYL+IGDG+L EVKHAQLEYE+SCLDINPI
Sbjct: 481  NEWHAPSGYSVNVATANATQVLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPI 540

Query: 1685 GENSNSSQLAAVGMWTDMSVRIFSLPGLDLITKEHLGGEVIPRSVLLCAFEGVSYLLCAL 1864
            GEN N S LAAVGMWTD+SVRIFSLP L LITKE LGGE+IPRSVLLCAFEG+SYLLCAL
Sbjct: 541  GENPNHSNLAAVGMWTDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCAL 600

Query: 1865 GDGHLFNFLLNLSTGELSDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 2044
            GDGHL NF+LN STGEL+DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFMLNTSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660

Query: 2045 LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEDELTIGTIDDIQKLHIRTIPLGEQPRRIAH 2224
            LYSNVNLKEVSHMCPFNSAAFPDSLAIAKE ELTIGTIDDIQKLHIR+IPLGE  RRI H
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH 720

Query: 2225 QEQSRTFAICCMKYGQSSTEESEMHFVRLLDDQTFEFISTYPLDTYEYGCSILSCTFADD 2404
            QEQSRTFAIC +KY  +S E+SEMHFVRLLDDQTFEFISTY LDTYEYGC I+SC+F+DD
Sbjct: 721  QEQSRTFAICSLKYNPASGEDSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDD 780

Query: 2405 SNSYYCLGTAYVLQEESEPSKGRILVFAVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 2584
            +N YYC+GTAYVL EE+EP+KGRI+VFAVEDGKLQLIAEKETKGAVY LNAFNGKLLAAI
Sbjct: 781  NNVYYCVGTAYVLPEENEPTKGRIIVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAI 840

Query: 2585 NQKMQLYKWMLRDDGSRELQSECGHHGHIIALYVQTRGDFIVVGDLMKSINLLIYKHEEG 2764
            NQK+QLYKW+LRDDG+ ELQSECGHHGHI+ALYVQTRGDFIVVGDLMKSI+LLIYKHEEG
Sbjct: 841  NQKIQLYKWVLRDDGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 900

Query: 2765 AIEERARDHNANWMTAVEILDDDVYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHL 2944
            AIEERARD+NANWM+AVEI+DDD+YLGAEN+FN+FTVRKNSEGATDEERGRLEVVGEYHL
Sbjct: 901  AIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHL 960

Query: 2945 GEFINRFRHGSLVMRLPDSDVGQIPTVIYGTVNGVIGVIASLPHEQYLFLEKLQSNLVKV 3124
            GEF+NRFRHGSLVMRLPDSDVGQIPTVI+GT+NGVIGVIASLPHEQY+FLEKLQSNL KV
Sbjct: 961  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKV 1020

Query: 3125 IKGVGGLSHDHWRSFNNEKKTADAKNFLDGDLIESFLDLSRKRMEEISKAMSVSVEDLCK 3304
            IKGVGGLSH+ WRSFNNEKKT +A+NFLDGDLIESFLDL+R +M+EISKA+ VSVE+LCK
Sbjct: 1021 IKGVGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLNRSKMDEISKAVDVSVEELCK 1080

Query: 3305 RVEELTRLH 3331
            RVEELTRLH
Sbjct: 1081 RVEELTRLH 1089


>ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1a-like isoform 1 [Glycine max]
          Length = 1089

 Score = 1929 bits (4997), Expect = 0.0
 Identities = 949/1089 (87%), Positives = 1022/1089 (93%)
 Frame = +2

Query: 65   MSSWNYAVTAHKPTNVTHSCVGNFTSPHELNLIIAKCTRIEIHLLTPQGLQAMVDVPIYG 244
            MS WNY VTAHKPTNVTHSCVGNFTSP +LNLIIAKCTRIEIHLL+PQGLQ M+DVPIYG
Sbjct: 1    MSIWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYG 60

Query: 245  RIATVELFRPYGEAQDFLFIATERYKFCVLQWDAETSDLITRAMGDVSDRIGRPTDNGQI 424
            RIAT+ELFRP+GEAQD+LFIATERYKFCVLQWD+ET++L+TRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGEAQDYLFIATERYKFCVLQWDSETAELVTRAMGDVSDRIGRPTDNGQI 120

Query: 425  GIIDPDCRLIGLHLYDGLFKVIPFDNRGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 604
            GIIDPDCRLIGLHLYDGLFKVIPFDN+GQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 180

Query: 605  YQDSKDARHVKTYEVALKEKDFVEGPWSQNNLDNGAGLIIPVPMPLXXXXXXXXXXXXYC 784
            YQD+KDARHVKTYEVALK+KDF+EGPWSQNNLDNGA L+IPVP PL            YC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFLEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC 240

Query: 785  SATAFKAIPTRPSITRAYGRVDADGSRYXXXXXXXXXXXXVITHEKERVTGLKIELLGET 964
            SA AFKAIP RPSIT+AYGRVD DGSRY            VITHEKE+VTGLKIE LGET
Sbjct: 241  SANAFKAIPIRPSITKAYGRVDPDGSRYLLGDHTGLLSLLVITHEKEKVTGLKIEPLGET 300

Query: 965  SIASTISYLDNAFVFVGSNYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 1144
            SIASTISYLDNAFV++GS+YGDSQLIKLNLQPDAKGSYVE LERYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAFVYIGSSYGDSQLIKLNLQPDAKGSYVEGLERYVNLGPIVDFCVVDLE 360

Query: 1145 RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDLYDTFLVVS 1324
            RQGQGQVVTCSGAYKDGSLR+VRNGIGINEQASVELQGIKGMWSLRSSTDD +DTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS 420

Query: 1325 FISETRILAMNSDDELEETEIEGFDSQVQTLFCHDAVHNQLLQVTASSVRLVNSTSRDLR 1504
            FISETRILAMN +DELEETEIEGF SQVQTLFCHDAVHNQL+QVT+SSVRLV+ST+R+LR
Sbjct: 421  FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRELR 480

Query: 1505 HDWKAPSGFSVNVATANATQVLLATGGGHLVYLDIGDGVLTEVKHAQLEYEVSCLDINPI 1684
            ++W APSG+SVNVATANATQVLLATGGGHLVYL+IGDG+L EVKHAQLEYE+SCLDINPI
Sbjct: 481  NEWHAPSGYSVNVATANATQVLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPI 540

Query: 1685 GENSNSSQLAAVGMWTDMSVRIFSLPGLDLITKEHLGGEVIPRSVLLCAFEGVSYLLCAL 1864
            GEN N S LAAVGMWTD+SVRIFSLP L LITKE LGGE+IPRSVLLCAFEG+SYLLCAL
Sbjct: 541  GENPNHSHLAAVGMWTDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCAL 600

Query: 1865 GDGHLFNFLLNLSTGELSDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 2044
            GDGHL NF+LN STGEL+DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFMLNTSTGELADRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660

Query: 2045 LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEDELTIGTIDDIQKLHIRTIPLGEQPRRIAH 2224
            LYSNVNLKEVSHMCPFNSAAFPDSLAIAKE ELTIGTIDDIQKLHIR+IPLGE  RRI H
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH 720

Query: 2225 QEQSRTFAICCMKYGQSSTEESEMHFVRLLDDQTFEFISTYPLDTYEYGCSILSCTFADD 2404
            QEQSRTFAIC +KY  +S E+SEMHFVRLLDDQTFEFISTY LDTYEYGC I+SC+F+DD
Sbjct: 721  QEQSRTFAICSLKYNPASGEDSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDD 780

Query: 2405 SNSYYCLGTAYVLQEESEPSKGRILVFAVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 2584
            +N YYC+GTAYVL EE+EP+KGRILVFAVEDGKLQLIAEKETKGAVY LNAFNGKLLAAI
Sbjct: 781  NNVYYCVGTAYVLPEENEPTKGRILVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAI 840

Query: 2585 NQKMQLYKWMLRDDGSRELQSECGHHGHIIALYVQTRGDFIVVGDLMKSINLLIYKHEEG 2764
            NQK+QLYKW+LRDDG+ ELQSECGHHGHI+ALYVQTRGDFIVVGDLMKSI+LLIYKHEEG
Sbjct: 841  NQKIQLYKWVLRDDGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 900

Query: 2765 AIEERARDHNANWMTAVEILDDDVYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHL 2944
            AIEERARD+NANWM+AVEI+DDD+YLGAEN+FN+FTVRKNSEGATDEERGRLEVVGEYHL
Sbjct: 901  AIEERARDYNANWMSAVEIVDDDIYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHL 960

Query: 2945 GEFINRFRHGSLVMRLPDSDVGQIPTVIYGTVNGVIGVIASLPHEQYLFLEKLQSNLVKV 3124
            GEF+NRFRHGSLVMRLPDSDVGQIPTVI+GT+NGVIGVIASLPHEQY+FLEKLQSNL KV
Sbjct: 961  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKV 1020

Query: 3125 IKGVGGLSHDHWRSFNNEKKTADAKNFLDGDLIESFLDLSRKRMEEISKAMSVSVEDLCK 3304
            IKGVGGLSH+ WRSFNNEKKT +A+NFLDGDLIESFLDL+R +M+EISKA+ VSVE+LCK
Sbjct: 1021 IKGVGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLNRSKMDEISKALDVSVEELCK 1080

Query: 3305 RVEELTRLH 3331
            RVEELTRLH
Sbjct: 1081 RVEELTRLH 1089


>ref|XP_002300334.1| predicted protein [Populus trichocarpa] gi|222847592|gb|EEE85139.1|
            predicted protein [Populus trichocarpa]
          Length = 1088

 Score = 1927 bits (4992), Expect = 0.0
 Identities = 956/1089 (87%), Positives = 1019/1089 (93%)
 Frame = +2

Query: 65   MSSWNYAVTAHKPTNVTHSCVGNFTSPHELNLIIAKCTRIEIHLLTPQGLQAMVDVPIYG 244
            MS WNY VTAHKPTNVTHSCVGNFTS  ELNLIIAKCTRIEI+LLTPQGLQ M+DVPIYG
Sbjct: 1    MSVWNYVVTAHKPTNVTHSCVGNFTSSQELNLIIAKCTRIEINLLTPQGLQPMLDVPIYG 60

Query: 245  RIATVELFRPYGEAQDFLFIATERYKFCVLQWDAETSDLITRAMGDVSDRIGRPTDNGQI 424
            RIAT+ELFRP+GEAQDFLFIATERYKFCVLQWDAETS+LITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIGRPTDNGQI 120

Query: 425  GIIDPDCRLIGLHLYDGLFKVIPFDNRGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 604
            GIIDPDCRLIGLHLYDGLFKVIPFDN+GQLKEAFNIRLEELQVLDIKFL+GCSKPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLHGCSKPTIVVL 180

Query: 605  YQDSKDARHVKTYEVALKEKDFVEGPWSQNNLDNGAGLIIPVPMPLXXXXXXXXXXXXYC 784
            YQD+KDARHVKTYEVALK+KDF+EGPWSQNNLDNGA L+IPVP P             YC
Sbjct: 181  YQDNKDARHVKTYEVALKDKDFIEGPWSQNNLDNGADLLIPVPPPFCGVLIIGEETIVYC 240

Query: 785  SATAFKAIPTRPSITRAYGRVDADGSRYXXXXXXXXXXXXVITHEKERVTGLKIELLGET 964
            SA  F+AIP RPSIT+AYGRVDADGSRY            VITHEKE+VTGLKIELLGET
Sbjct: 241  SANVFRAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET 300

Query: 965  SIASTISYLDNAFVFVGSNYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 1144
            SIASTISYLDNAFVF+GS+YGDSQL+KLNL PDAKG+YVEVL+RYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAFVFIGSSYGDSQLVKLNLHPDAKGTYVEVLDRYVNLGPIVDFCVVDLE 360

Query: 1145 RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDLYDTFLVVS 1324
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS TDD +DTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSLTDDPFDTFLVVS 420

Query: 1325 FISETRILAMNSDDELEETEIEGFDSQVQTLFCHDAVHNQLLQVTASSVRLVNSTSRDLR 1504
            FISETRILAMN +DELEETEIEGF SQVQTLFCH AV NQL+QVT+SSVRLV+ST+R+LR
Sbjct: 421  FISETRILAMNIEDELEETEIEGFCSQVQTLFCHCAVFNQLVQVTSSSVRLVSSTTRELR 480

Query: 1505 HDWKAPSGFSVNVATANATQVLLATGGGHLVYLDIGDGVLTEVKHAQLEYEVSCLDINPI 1684
             +W APSG+S+NVATANATQVLLATGGGHLVYL+IGDG LT+ KHAQLE E+SCLDINPI
Sbjct: 481  QEWNAPSGYSINVATANATQVLLATGGGHLVYLEIGDGTLTQAKHAQLECEISCLDINPI 540

Query: 1685 GENSNSSQLAAVGMWTDMSVRIFSLPGLDLITKEHLGGEVIPRSVLLCAFEGVSYLLCAL 1864
            GEN N SQLAAVGMWTD+SVRIFSLP L+LITKE LGGE+IPRSVLLC+FEG++YLLCAL
Sbjct: 541  GENPNYSQLAAVGMWTDISVRIFSLPDLNLITKEPLGGEIIPRSVLLCSFEGIAYLLCAL 600

Query: 1865 GDGHLFNFLLNLSTGELSDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 2044
            GDGHL NFLLNLSTG L DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFLLNLSTGGLKDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 660

Query: 2045 LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEDELTIGTIDDIQKLHIRTIPLGEQPRRIAH 2224
            LYSNVNLKEVSHMCPFNSAAFPDSLAIAKE EL+IGTIDDIQKLHIR+IPLGE  RRI H
Sbjct: 661  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELSIGTIDDIQKLHIRSIPLGEHARRICH 720

Query: 2225 QEQSRTFAICCMKYGQSSTEESEMHFVRLLDDQTFEFISTYPLDTYEYGCSILSCTFADD 2404
            QEQSRTF+IC MK  QS+ EESEMHF+RLLDDQTFEFISTYPLDT+EYGCSILSC+F+DD
Sbjct: 721  QEQSRTFSICSMK-NQSNAEESEMHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 779

Query: 2405 SNSYYCLGTAYVLQEESEPSKGRILVFAVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 2584
            SN YYC+GTAYVL EE+EP+KGRILVF VEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
Sbjct: 780  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 839

Query: 2585 NQKMQLYKWMLRDDGSRELQSECGHHGHIIALYVQTRGDFIVVGDLMKSINLLIYKHEEG 2764
            NQK+QLYKWMLRDDG+RELQSECGHHGHI+ALYVQTRGDFIVVGDLMKSI+LLIYKHEEG
Sbjct: 840  NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 899

Query: 2765 AIEERARDHNANWMTAVEILDDDVYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHL 2944
            AIEERARD+NANWM+AVEILDDD+YLGAENNFN+FTVRKNSEGATDEERGRLEVVGEYHL
Sbjct: 900  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 959

Query: 2945 GEFINRFRHGSLVMRLPDSDVGQIPTVIYGTVNGVIGVIASLPHEQYLFLEKLQSNLVKV 3124
            GEF+NRFRHGSLVMRLPDSDVGQIPTVI+GTVNGVIGVIASLPHEQYLFLEKLQSNL KV
Sbjct: 960  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQSNLRKV 1019

Query: 3125 IKGVGGLSHDHWRSFNNEKKTADAKNFLDGDLIESFLDLSRKRMEEISKAMSVSVEDLCK 3304
            IKGVGGLSH+ WRSFNNEKKT DAKNFLDGDLIESFLDLSR RM+EISKAM +SVE+LCK
Sbjct: 1020 IKGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRSRMDEISKAMEISVEELCK 1079

Query: 3305 RVEELTRLH 3331
            RVEELTRLH
Sbjct: 1080 RVEELTRLH 1088


>ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycopersicum]
            gi|350539125|ref|NP_001233864.1| UV damaged DNA binding
            protein 1 [Solanum lycopersicum]
            gi|55976440|sp|Q6QNU4.1|DDB1_SOLLC RecName: Full=DNA
            damage-binding protein 1; AltName: Full=High pigmentation
            protein 1; AltName: Full=UV-damaged DNA-binding protein 1
            gi|38455768|gb|AAR20885.1| UV damaged DNA binding protein
            1 [Solanum lycopersicum] gi|42602165|gb|AAS21683.1|
            UV-damaged DNA binding protein 1 [Solanum lycopersicum]
          Length = 1090

 Score = 1903 bits (4929), Expect = 0.0
 Identities = 937/1090 (85%), Positives = 1018/1090 (93%), Gaps = 1/1090 (0%)
 Frame = +2

Query: 65   MSSWNYAVTAHKPTNVTHSCVGNFTSPHELNLIIAKCTRIEIHLLTPQGLQAMVDVPIYG 244
            MS WNY VTAHKPTNVTHSCVGNFT P ELNLIIAKCTRIEIHLLTPQGLQ M+DVPIYG
Sbjct: 1    MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 245  RIATVELFRPYGEAQDFLFIATERYKFCVLQWDAETSDLITRAMGDVSDRIGRPTDNGQI 424
            RIAT+ELFRP+GE QD LFIATERYKFCVLQWD E S++ITRAMGDVSDRIGRPTDNGQI
Sbjct: 61   RIATLELFRPHGETQDLLFIATERYKFCVLQWDTEASEVITRAMGDVSDRIGRPTDNGQI 120

Query: 425  GIIDPDCRLIGLHLYDGLFKVIPFDNRGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL 604
            GIIDPDCRLIGLHLYDGLFKVIPFDN+GQLKEAFNIRLEELQVLDIKFLYGC KPTIVVL
Sbjct: 121  GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVL 180

Query: 605  YQDSKDARHVKTYEVALKEKDFVEGPWSQNNLDNGAGLIIPVPMPLXXXXXXXXXXXXYC 784
            YQD+KDARHVKTYEV+LK+KDF+EGPW+QNNLDNGA L+IPVP PL            YC
Sbjct: 181  YQDNKDARHVKTYEVSLKDKDFIEGPWAQNNLDNGASLLIPVPPPLCGVLIIGEETIVYC 240

Query: 785  SATAFKAIPTRPSITRAYGRVDADGSRYXXXXXXXXXXXXVITHEKERVTGLKIELLGET 964
            SA+AFKAIP RPSITRAYGRVDADGSRY            VITHEKE+VTGLKIELLGET
Sbjct: 241  SASAFKAIPIRPSITRAYGRVDADGSRYLLGDHNGLLHLLVITHEKEKVTGLKIELLGET 300

Query: 965  SIASTISYLDNAFVFVGSNYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE 1144
            SIASTISYLDNAFVF+GS+YGDSQL+KLNLQPD KGSYVEVLERYVNLGPIVDFCVVDLE
Sbjct: 301  SIASTISYLDNAFVFIGSSYGDSQLVKLNLQPDTKGSYVEVLERYVNLGPIVDFCVVDLE 360

Query: 1145 RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDLYDTFLVVS 1324
            RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS+TDD YDTFLVVS
Sbjct: 361  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDPYDTFLVVS 420

Query: 1325 FISETRILAMNSDDELEETEIEGFDSQVQTLFCHDAVHNQLLQVTASSVRLVNSTSRDLR 1504
            FISETR+LAMN +DELEETEIEGF+SQVQTLFCHDAV+NQL+QVT++SVRLV+STSRDL+
Sbjct: 421  FISETRVLAMNLEDELEETEIEGFNSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTSRDLK 480

Query: 1505 HDWKAPSGFSVNVATANATQVLLATGGGHLVYLDIGDGVLTEVKHAQLEYEVSCLDINPI 1684
            ++W AP G+SVNVATANATQVLLATGGGHLVYL+IGDGVL EVK+A+L+Y++SCLDINPI
Sbjct: 481  NEWFAPVGYSVNVATANATQVLLATGGGHLVYLEIGDGVLNEVKYAKLDYDISCLDINPI 540

Query: 1685 GENSNSSQLAAVGMWTDMSVRIFSLPGLDLITKEHLGGEVIPRSVLLCAFEGVSYLLCAL 1864
            GEN N S +AAVGMWTD+SVRI+SLP L+LITKE LGGE+IPRSVL+C+FEG+SYLLCAL
Sbjct: 541  GENPNYSNIAAVGMWTDISVRIYSLPDLNLITKEQLGGEIIPRSVLMCSFEGISYLLCAL 600

Query: 1865 GDGHLFNFLLNLSTGELSDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 2044
            GDGHL NF+L++STGEL+DRKKVSLGTQPITLRTFSSK+TTHVFAASDRPTVIYSSNKKL
Sbjct: 601  GDGHLLNFVLSMSTGELTDRKKVSLGTQPITLRTFSSKDTTHVFAASDRPTVIYSSNKKL 660

Query: 2045 LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEDELTIGTIDDIQKLHIRTIPLGEQPRRIAH 2224
            LYSNVNLKEVSHMCPFN AAFPDSLAIAKE ELTIGTID+IQKLHIR+IPLGE  RRI+H
Sbjct: 661  LYSNVNLKEVSHMCPFNVAAFPDSLAIAKEGELTIGTIDEIQKLHIRSIPLGEHARRISH 720

Query: 2225 QEQSRTFAICCMKYGQSSTEESEMHFVRLLDDQTFEFISTYPLDTYEYGCSILSCTFADD 2404
            QEQ+RTFA+C +KY QS+ ++ EMHFVRLLDDQTFEFISTYPLD +EYGCSILSC+F+DD
Sbjct: 721  QEQTRTFALCSVKYTQSNADDPEMHFVRLLDDQTFEFISTYPLDQFEYGCSILSCSFSDD 780

Query: 2405 SNSYYCLGTAYVLQEESEPSKGRILVFAVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 2584
            SN YYC+GTAYV+ EE+EP+KGRILVF VEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
Sbjct: 781  SNVYYCIGTAYVMPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 840

Query: 2585 NQKMQLYKWMLRDD-GSRELQSECGHHGHIIALYVQTRGDFIVVGDLMKSINLLIYKHEE 2761
            NQK+QLYKW  R+D GSRELQ+ECGHHGHI+ALYVQTRGDFIVVGDLMKSI+LLI+KHEE
Sbjct: 841  NQKIQLYKWASREDGGSRELQTECGHHGHILALYVQTRGDFIVVGDLMKSISLLIFKHEE 900

Query: 2762 GAIEERARDHNANWMTAVEILDDDVYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYH 2941
            GAIEERARD+NANWM+AVEILDDD+YLGAENNFN+FTVRKNSEGATDEER RLEVVGEYH
Sbjct: 901  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERSRLEVVGEYH 960

Query: 2942 LGEFINRFRHGSLVMRLPDSDVGQIPTVIYGTVNGVIGVIASLPHEQYLFLEKLQSNLVK 3121
            LGEF+NRFRHGSLVMRLPDSDVGQIPTVI+GTVNGVIGVIASLPH+QYLFLEKLQ+NL K
Sbjct: 961  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYLFLEKLQTNLRK 1020

Query: 3122 VIKGVGGLSHDHWRSFNNEKKTADAKNFLDGDLIESFLDLSRKRMEEISKAMSVSVEDLC 3301
            VIKGVGGLSH+ WRSF NEKKT DAKNFLDGDLIESFLDLSR RMEEISKAMSV VE+L 
Sbjct: 1021 VIKGVGGLSHEQWRSFYNEKKTVDAKNFLDGDLIESFLDLSRNRMEEISKAMSVPVEELM 1080

Query: 3302 KRVEELTRLH 3331
            KRVEELTRLH
Sbjct: 1081 KRVEELTRLH 1090