BLASTX nr result

ID: Coptis24_contig00003328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003328
         (1442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40797.1| unknown [Picea sitchensis]                              78   7e-12
ref|XP_002522872.1| Aspartic proteinase nepenthesin-2 precursor,...    72   5e-10
ref|XP_003610881.1| Aspartic proteinase nepenthesin-1 [Medicago ...    66   2e-08
ref|XP_002967518.1| hypothetical protein SELMODRAFT_87804 [Selag...    66   2e-08
emb|CBI40110.3| unnamed protein product [Vitis vinifera]               66   3e-08

>gb|ACN40797.1| unknown [Picea sitchensis]
          Length = 383

 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 39/101 (38%), Positives = 58/101 (57%)
 Frame = -2

Query: 532 SHYFVTLEGISVQGVCLQIDPGASPRTPDHNGGCLLDTGSPWTAIHRKEYDIVKSAMQAH 353
           +HY+++LEGISV G  L I  G      D +GG ++D+G+  T + +  YD VK AM   
Sbjct: 225 NHYYLSLEGISVGGQSLAIPTGTFDIQSDGSGGLIIDSGTTLTFLQQTAYDAVKEAM--- 281

Query: 352 FSAFHMEQVPGMFDLCYLNRNQQRLPYPCMTFHFHGADLEL 230
            S+ ++ Q  G  DLC+  +      +P MTFHF GAD ++
Sbjct: 282 VSSINLPQADGQLDLCFNQQGSSNPGFPSMTFHFKGADYDV 322


>ref|XP_002522872.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus
           communis] gi|223537956|gb|EEF39570.1| Aspartic
           proteinase nepenthesin-2 precursor, putative [Ricinus
           communis]
          Length = 448

 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
 Frame = -2

Query: 613 STFLRMGNDVGFKDGQKIHHTLLLP-GESHYFVTLEGISVQGVCLQIDPGASPRTPDHNG 437
           ++ LR GND+     + +    + P G  +YF+ L  +SV G  +QI PG     PD  G
Sbjct: 257 TSLLRFGNDIRKSRRKYLSTPFVSPRGMPNYFLNLIDVSVAGNRMQIPPGTFALKPDGTG 316

Query: 436 GCLLDTGSPWTAIHRKEYDIVKSAMQAHFSAFHMEQVPGMFD--LCYLNRNQQRLPYPCM 263
           G ++D+G+  T I +  Y  V +A + +F     ++V       +CY  +      YP M
Sbjct: 317 GTIIDSGTAVTYISQTAYFPVITAFKNYFDQHGFQRVNIQLSGYICYKQQGHTFHNYPSM 376

Query: 262 TFHFHGADLELGPTQLFLRTLD--GFC 188
            FHF GAD  + P  ++L   D   FC
Sbjct: 377 AFHFQGADFFVEPEYVYLTVQDRGAFC 403


>ref|XP_003610881.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula]
           gi|355512216|gb|AES93839.1| Aspartic proteinase
           nepenthesin-1 [Medicago truncatula]
          Length = 427

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
 Frame = -2

Query: 538 GESHYFVTLEGISVQGVCLQIDPGASPRTPDHNGGCLLDTGSPWTAIHRKEYDIVKSAMQ 359
           G++ Y VTLEGISV    ++ +   +       G  ++D+G+P T I ++ Y+ +   ++
Sbjct: 273 GQTSYLVTLEGISVGDTFVRFNSSETLS----KGNIMIDSGTPATYIPQEFYERLVEELK 328

Query: 358 AHFSAFHMEQVPGM-FDLCYLNRNQQRLPYPCMTFHFHGADLELGPTQLFLRTLDG-FCF 185
              S   +E  P +   LCY  R++  L  P +T HF GAD++L P Q F+   DG FCF
Sbjct: 329 VQSSLLPIEDDPDLGTQLCY--RSETNLEGPILTAHFEGADVQLLPIQTFIPPKDGVFCF 386

Query: 184 IYIVGFHDHEFFF 146
             + G  D ++ F
Sbjct: 387 A-MAGSTDGDYIF 398


>ref|XP_002967518.1| hypothetical protein SELMODRAFT_87804 [Selaginella moellendorffii]
           gi|300165509|gb|EFJ32117.1| hypothetical protein
           SELMODRAFT_87804 [Selaginella moellendorffii]
          Length = 398

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
 Frame = -2

Query: 571 GQKIHH--TLLLPG---ESHYFVTLEGISVQGVCLQIDPGASPRTPDHNGGCLLDTGSPW 407
           G+K+H+  T ++     ES Y+V L+ IS+ G  L+I  G+    PD +GG + D+G+  
Sbjct: 217 GKKLHYAFTPMIHNPAMESFYYVKLKDISIAGRALRIPAGSFDIKPDGSGGMIFDSGTTL 276

Query: 406 TAIHRKEYDIVKSAMQAHFSAFHMEQVPGMFDLCY---LNRNQQRLPYPCMTFHFHGADL 236
           T +    Y IV  A+++  S   ++      DLCY    ++   ++  P M FHF GAD 
Sbjct: 277 TLLPDAPYQIVLRALRSKISFPKIDGSSAGLDLCYDVSGSKASYKMKIPAMVFHFEGADY 336

Query: 235 ELGPTQLFLRTLD 197
           +L     F+   D
Sbjct: 337 QLPVENYFIAAND 349


>emb|CBI40110.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
 Frame = -2

Query: 604 LRMGNDVGFKDGQKIHHTLLLPGESHYFVTLEGISVQGVCLQIDPGASPRTPDHNGGCLL 425
           L +G+ V  +      HT        Y+VTLEGISV    L I+P    RT    GG ++
Sbjct: 223 LVLGDGVKMEGSSTPFHTF----NGFYYVTLEGISVGETRLDINPEVFQRTESGQGGVVM 278

Query: 424 DTGSPWTAIHRKEYDIVKSAMQ----AHFSAFHMEQVPGMFDLCYLNR-NQQRLPYPCMT 260
           D+G+  T + +  +D + + +Q     HF       +PG   LCY  R N+    +P + 
Sbjct: 279 DSGTTATFLAKDGFDPLSNEIQRLVRGHFQQVIYRTIPGW--LCYKGRVNEDLRGFPELA 336

Query: 259 FHF-HGADLELGPTQLFL-RTLDGFC 188
           FHF  GADL L    LF+ +  D FC
Sbjct: 337 FHFAEGADLVLDANSLFVQKNQDVFC 362


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